Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03015

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 2
3,357,373	-		MIT1002_03013	0.58	+0.4
3,357,396	-		MIT1002_03013	0.61	+0.0
3,357,427	+		MIT1002_03013	0.65	-0.0
3,357,434	+		MIT1002_03013	0.66	-1.8
3,357,441	+		MIT1002_03013	0.67	-0.2
3,357,568	+		MIT1002_03013	0.84	+0.0
3,357,568	+		MIT1002_03013	0.84	+0.8
3,357,568	+		MIT1002_03013	0.84	+0.4
3,357,568	+		MIT1002_03013	0.84	-1.5
3,357,568	+		MIT1002_03013	0.84	-0.5
3,357,568	+		MIT1002_03013	0.84	-0.2
3,357,568	+		MIT1002_03013	0.84	+0.2
3,357,573	+		MIT1002_03013	0.84	+0.8
3,357,574	-		MIT1002_03013	0.84	-3.8
3,357,576	-		MIT1002_03013	0.85	-0.1
3,357,576	-		MIT1002_03013	0.85	-0.1
3,357,576	-		MIT1002_03013	0.85	-1.1
3,357,635	-				+0.3
3,357,637	-				-0.0
3,357,653	+				-0.2
3,357,653	+				-1.5
3,357,660	+				-1.2
3,357,661	-				+0.2
3,357,692	+				+1.1
3,357,708	+				+0.2
3,357,729	-				+0.3
3,357,855	-		MIT1002_03014	0.13	-0.5
3,357,863	-		MIT1002_03014	0.17	-0.5
3,357,936	+		MIT1002_03014	0.49	-1.0
3,358,003	+		MIT1002_03014	0.78	+1.8
3,358,054	-				-0.9
3,358,089	+				+0.5
3,358,096	+				-0.1
3,358,129	+				-0.7
3,358,137	-				+0.2
3,358,142	-				-0.8
3,358,343	-				-3.0
3,358,538	+		MIT1002_03015	0.30	-1.0
3,358,546	-		MIT1002_03015	0.31	-3.6
3,358,600	+		MIT1002_03015	0.38	+0.1
3,358,709	+		MIT1002_03015	0.50	-2.9
3,358,711	-		MIT1002_03015	0.50	-1.3
3,358,713	+		MIT1002_03015	0.51	-1.2
3,358,719	+		MIT1002_03015	0.51	-2.9
3,358,724	+		MIT1002_03015	0.52	-2.3
3,358,772	+		MIT1002_03015	0.57	-0.1
3,358,778	-		MIT1002_03015	0.58	-3.2
3,358,780	-		MIT1002_03015	0.58	-4.6
3,358,780	-		MIT1002_03015	0.58	-1.9
3,358,820	+		MIT1002_03015	0.63	-4.0
3,358,865	+		MIT1002_03015	0.68	-2.8
3,359,001	-		MIT1002_03015	0.84	-3.1
3,359,145	+				+0.9
3,359,145	+				+0.6
3,359,145	+				+1.6
3,359,159	+				-0.4
3,359,167	-				-0.1
3,359,214	+				-1.7
3,359,214	+				-1.7
3,359,214	+				-0.3
3,359,222	-				+0.3
3,359,222	-				-0.3
3,359,222	-				-0.7
3,359,222	-				-0.4
3,359,350	+		MIT1002_03016	0.22	+0.5
3,359,352	-		MIT1002_03016	0.22	+1.4
3,359,360	+		MIT1002_03016	0.24	-0.9
3,359,360	+		MIT1002_03016	0.24	+0.6
3,359,394	-		MIT1002_03016	0.33	-0.4
3,359,438	-		MIT1002_03016	0.45	-3.0
3,359,464	+		MIT1002_03016	0.52	-1.0
3,359,519	+		MIT1002_03016	0.66	-0.1
3,359,519	+		MIT1002_03016	0.66	+0.8
3,359,527	+		MIT1002_03016	0.68	+0.9
3,359,636	-				+1.3
3,359,659	-				-0.8