Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02830

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 2
3,135,336	-		MIT1002_02829	0.51	+0.5
3,135,349	-		MIT1002_02829	0.52	+0.1
3,135,437	-		MIT1002_02829	0.58	+0.4
3,135,483	+		MIT1002_02829	0.61	+0.6
3,135,513	-		MIT1002_02829	0.63	-0.4
3,135,640	+		MIT1002_02829	0.72	+0.3
3,135,640	+		MIT1002_02829	0.72	+0.4
3,135,648	-		MIT1002_02829	0.72	+0.0
3,135,657	+		MIT1002_02829	0.73	-0.3
3,135,657	+		MIT1002_02829	0.73	-1.3
3,135,665	-		MIT1002_02829	0.74	+1.2
3,135,724	-		MIT1002_02829	0.78	-0.5
3,135,784	+		MIT1002_02829	0.82	+1.4
3,135,784	+		MIT1002_02829	0.82	+0.5
3,135,852	-		MIT1002_02829	0.86	-0.3
3,135,887	-		MIT1002_02829	0.89	-1.8
3,135,887	-		MIT1002_02829	0.89	+0.4
3,135,890	+		MIT1002_02829	0.89	-0.7
3,135,934	+				+1.5
3,135,934	+				+0.2
3,135,942	-				-0.8
3,135,942	-				-1.8
3,135,963	-				+0.0
3,136,020	+				+0.1
3,136,020	+				+2.3
3,136,028	-				+0.6
3,136,028	-				+0.7
3,136,028	-				+0.3
3,136,028	-				-2.5
3,136,028	-				-1.4
3,136,061	-				-0.3
3,136,063	+				+1.0
3,136,086	-				+0.7
3,136,088	+				-0.5
3,136,088	+				-0.0
3,136,146	+				+0.4
3,136,154	-				-0.2
3,136,161	-				+0.2
3,136,181	+				-0.6
3,136,181	+				+0.8
3,136,189	-				+0.7
3,136,189	-				-0.8
3,136,189	-				+1.7
3,136,189	-				-1.2
3,136,302	+				-1.2
3,136,302	+				-1.3
3,136,310	-				+0.5
3,136,325	-				-0.9
3,136,333	-				+0.4
3,136,338	+				-0.5
3,136,464	+		MIT1002_02830	0.18	-2.3
3,136,474	+		MIT1002_02830	0.19	+0.9
3,136,474	+		MIT1002_02830	0.19	+0.0
3,136,474	+		MIT1002_02830	0.19	+1.6
3,136,474	+		MIT1002_02830	0.19	+0.2
3,136,482	-		MIT1002_02830	0.20	-0.8
3,136,482	-		MIT1002_02830	0.20	+0.1
3,136,494	-		MIT1002_02830	0.21	-0.7
3,136,494	-		MIT1002_02830	0.21	-1.0
3,136,499	-		MIT1002_02830	0.22	+0.3
3,136,599	+		MIT1002_02830	0.32	-0.9
3,136,599	+		MIT1002_02830	0.32	-1.8
3,136,599	+		MIT1002_02830	0.32	+1.3
3,136,633	+		MIT1002_02830	0.36	-0.8
3,136,633	+		MIT1002_02830	0.36	-1.3
3,136,633	+		MIT1002_02830	0.36	-3.6
3,136,633	+		MIT1002_02830	0.36	-0.2
3,136,633	+		MIT1002_02830	0.36	-1.9
3,136,641	-		MIT1002_02830	0.37	+0.7
3,136,641	-		MIT1002_02830	0.37	+0.3
3,136,641	-		MIT1002_02830	0.37	-0.1
3,136,641	-		MIT1002_02830	0.37	-0.4
3,136,641	-		MIT1002_02830	0.37	-2.7
3,136,665	+		MIT1002_02830	0.39	-0.1
3,136,665	+		MIT1002_02830	0.39	+0.5
3,136,834	-		MIT1002_02830	0.57	-1.6
3,137,094	+		MIT1002_02830	0.84	+0.4
3,137,097	-		MIT1002_02830	0.84	-2.3
3,137,231	-				-0.3
3,137,287	-				+0.8
3,137,309	+				-0.2
3,137,334	-				-0.3
3,137,676	-				-5.8
3,137,721	+				-3.0
3,137,721	+				-5.2
3,137,754	+				-2.3
3,137,787	+				-2.6
3,137,787	+				-4.6
3,137,788	-				-4.2
3,137,808	+				-2.6
3,137,808	+				-5.1
3,137,816	-				-3.4
3,137,816	-				-1.0
3,137,816	-				-3.7
3,137,820	+				-1.8
3,137,881	+		MIT1002_02831	0.12	-4.8
3,137,948	+		MIT1002_02831	0.16	-5.7
3,137,955	+		MIT1002_02831	0.17	-7.5
3,137,978	-		MIT1002_02831	0.18	-3.2
3,138,000	-		MIT1002_02831	0.20	-1.0
3,138,010	+		MIT1002_02831	0.20	-4.4
3,138,068	-		MIT1002_02831	0.24	-4.0
3,138,080	+		MIT1002_02831	0.25	-2.6
3,138,088	-		MIT1002_02831	0.25	-4.9
3,138,088	-		MIT1002_02831	0.25	-4.2
3,138,108	-		MIT1002_02831	0.27	-1.0
3,138,221	-		MIT1002_02831	0.34	-4.9