Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02814

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 2
3,118,532	-		MIT1002_02813	0.26	-1.4
3,118,540	-		MIT1002_02813	0.27	-1.9
3,118,561	+		MIT1002_02813	0.28	-1.8
3,118,561	+		MIT1002_02813	0.28	-0.9
3,118,569	+		MIT1002_02813	0.29	-2.5
3,118,569	-		MIT1002_02813	0.29	+0.1
3,118,569	-		MIT1002_02813	0.29	-0.2
3,118,569	-		MIT1002_02813	0.29	-2.9
3,118,569	-		MIT1002_02813	0.29	-0.3
3,118,569	-		MIT1002_02813	0.29	-0.6
3,118,569	-		MIT1002_02813	0.29	+0.3
3,118,571	+		MIT1002_02813	0.29	-0.5
3,118,589	+		MIT1002_02813	0.31	-0.0
3,118,602	-		MIT1002_02813	0.32	+0.6
3,118,618	-		MIT1002_02813	0.34	+1.0
3,118,778	+		MIT1002_02813	0.48	-0.3
3,118,786	-		MIT1002_02813	0.49	-0.3
3,118,793	-		MIT1002_02813	0.49	-1.5
3,118,793	-		MIT1002_02813	0.49	-0.4
3,118,836	-		MIT1002_02813	0.53	-0.9
3,118,916	-		MIT1002_02813	0.60	+0.0
3,118,917	+		MIT1002_02813	0.60	+1.1
3,118,917	+		MIT1002_02813	0.60	-2.3
3,118,925	-		MIT1002_02813	0.61	+0.1
3,118,926	-		MIT1002_02813	0.61	+0.1
3,119,009	+		MIT1002_02813	0.69	-1.0
3,119,098	+		MIT1002_02813	0.77	-3.4
3,119,106	-		MIT1002_02813	0.77	-3.1
3,119,131	-		MIT1002_02813	0.80	-0.9
3,119,206	-		MIT1002_02813	0.86	+0.1
3,119,206	-		MIT1002_02813	0.86	+0.4
3,119,211	-		MIT1002_02813	0.87	-0.8
3,119,211	-		MIT1002_02813	0.87	-0.1
3,119,239	-		MIT1002_02813	0.89	-0.5
3,119,382	+				+0.7
3,119,390	-				+0.0
3,119,470	-				+0.5
3,119,484	-				-2.4
3,119,512	-				+1.6
3,119,536	-				+0.1
3,119,646	-		MIT1002_02814	0.11	-0.3
3,119,772	+		MIT1002_02814	0.23	-0.2
3,119,777	+		MIT1002_02814	0.24	-0.6
3,119,780	-		MIT1002_02814	0.24	-0.2
3,119,783	+		MIT1002_02814	0.24	-0.7
3,119,796	+		MIT1002_02814	0.25	+0.0
3,119,824	-		MIT1002_02814	0.28	-0.3
3,119,824	-		MIT1002_02814	0.28	-0.1
3,119,843	+		MIT1002_02814	0.30	-1.2
3,119,843	+		MIT1002_02814	0.30	+1.1
3,119,851	-		MIT1002_02814	0.31	+0.1
3,119,851	-		MIT1002_02814	0.31	-0.4
3,119,857	+		MIT1002_02814	0.31	-0.0
3,119,857	+		MIT1002_02814	0.31	+0.3
3,119,865	-		MIT1002_02814	0.32	+0.5
3,119,865	-		MIT1002_02814	0.32	-1.1
3,119,865	-		MIT1002_02814	0.32	-1.2
3,119,942	+		MIT1002_02814	0.39	-0.8
3,119,942	+		MIT1002_02814	0.39	+0.0
3,119,950	-		MIT1002_02814	0.40	+1.3
3,119,955	-		MIT1002_02814	0.41	+0.3
3,119,980	+		MIT1002_02814	0.43	-0.5
3,119,988	-		MIT1002_02814	0.44	+0.5
3,120,011	+		MIT1002_02814	0.46	-0.6
3,120,015	+		MIT1002_02814	0.46	+0.9
3,120,023	-		MIT1002_02814	0.47	-1.2
3,120,031	+		MIT1002_02814	0.48	+1.6
3,120,031	+		MIT1002_02814	0.48	-0.1
3,120,039	-		MIT1002_02814	0.49	+0.7
3,120,091	-		MIT1002_02814	0.54	-1.6
3,120,165	+		MIT1002_02814	0.61	+0.3
3,120,174	-		MIT1002_02814	0.62	-2.6
3,120,176	+		MIT1002_02814	0.62	-0.5
3,120,181	+		MIT1002_02814	0.62	+0.8
3,120,188	-		MIT1002_02814	0.63	-2.7
3,120,213	+		MIT1002_02814	0.65	-2.1
3,120,308	+		MIT1002_02814	0.74	+0.6
3,120,313	-		MIT1002_02814	0.75	-0.2
3,120,317	+		MIT1002_02814	0.75	-0.9
3,120,317	+		MIT1002_02814	0.75	+0.1
3,120,325	-		MIT1002_02814	0.76	-0.5
3,120,325	-		MIT1002_02814	0.76	+0.7
3,120,391	-		MIT1002_02814	0.82	+0.2
3,120,408	-		MIT1002_02814	0.84	+1.4
3,120,451	+		MIT1002_02814	0.88	+0.1
3,120,457	-		MIT1002_02814	0.89	-1.0
3,120,514	-				+0.7
3,120,516	-				+0.4
3,120,518	+				-2.8
3,120,521	-				+0.9
3,120,523	+				-0.3
3,120,866	+				-0.0
3,120,914	+				-1.9
3,120,921	-				+0.2
3,120,924	+				+0.1
3,121,009	+				-0.1
3,121,035	-				+0.8
3,121,164	-		MIT1002_02815	0.55	-0.4
3,121,166	+		MIT1002_02815	0.56	-1.5
3,121,172	+		MIT1002_02815	0.58	-1.3
3,121,174	-		MIT1002_02815	0.59	-2.8
3,121,279	+				-1.6
3,121,381	+				+0.9
3,121,386	+				-0.1
3,121,389	-				+1.9
3,121,394	-				-1.1
3,121,400	+				+1.7
3,121,417	+				-0.0
3,121,447	+				+1.0
3,121,453	-				-0.4
3,121,493	+				+0.6
3,121,496	-				+2.1
3,121,564	+				+0.2
3,121,574	+				-0.3