Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02233

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 2
2,494,389	-		MIT1002_02232	0.36	+1.3
2,494,417	+		MIT1002_02232	0.38	+2.6
2,494,501	+		MIT1002_02232	0.45	+0.1
2,494,509	-		MIT1002_02232	0.46	+0.1
2,494,566	+		MIT1002_02232	0.51	-0.7
2,494,566	+		MIT1002_02232	0.51	+2.6
2,494,574	-		MIT1002_02232	0.51	-0.8
2,494,574	-		MIT1002_02232	0.51	+1.4
2,494,574	-		MIT1002_02232	0.51	-0.2
2,494,626	-		MIT1002_02232	0.56	-1.7
2,494,705	-		MIT1002_02232	0.62	+1.0
2,494,792	-		MIT1002_02232	0.69	+0.6
2,494,845	+		MIT1002_02232	0.74	-3.6
2,494,911	+		MIT1002_02232	0.79	-0.3
2,494,917	-		MIT1002_02232	0.80	-0.2
2,494,940	+		MIT1002_02232	0.81	+2.4
2,495,053	+				-0.6
2,495,061	+				+1.4
2,495,061	-				-0.7
2,495,097	-				-0.3
2,495,097	-				+0.9
2,495,103	+				-0.5
2,495,198	-				+1.5
2,495,245	+				-1.0
2,495,258	+				+1.3
2,495,378	-				-0.4
2,495,380	+				-0.4
2,495,380	+				-0.5
2,495,422	-		MIT1002_02233	0.11	-0.8
2,495,450	-		MIT1002_02233	0.13	-0.5
2,495,452	+		MIT1002_02233	0.14	-0.5
2,495,455	-		MIT1002_02233	0.14	-0.3
2,495,457	+		MIT1002_02233	0.14	-0.3
2,495,459	+		MIT1002_02233	0.14	+0.3
2,495,459	+		MIT1002_02233	0.14	-0.2
2,495,459	+		MIT1002_02233	0.14	-2.4
2,495,459	+		MIT1002_02233	0.14	-0.7
2,495,460	-		MIT1002_02233	0.14	-3.6
2,495,467	-		MIT1002_02233	0.15	-1.4
2,495,467	-		MIT1002_02233	0.15	-0.8
2,495,467	-		MIT1002_02233	0.15	-1.4
2,495,494	-		MIT1002_02233	0.17	+0.1
2,495,603	+		MIT1002_02233	0.25	-2.2
2,495,662	-		MIT1002_02233	0.29	-0.1
2,495,687	+		MIT1002_02233	0.31	+0.1
2,495,690	-		MIT1002_02233	0.31	-0.1
2,495,725	+		MIT1002_02233	0.33	+0.4
2,495,761	+		MIT1002_02233	0.36	-2.9
2,495,763	+		MIT1002_02233	0.36	-2.7
2,495,768	+		MIT1002_02233	0.37	-0.5
2,495,818	-		MIT1002_02233	0.40	+1.3
2,495,818	-		MIT1002_02233	0.40	+1.4
2,495,827	+		MIT1002_02233	0.41	-1.8
2,495,827	+		MIT1002_02233	0.41	+0.1
2,495,969	+		MIT1002_02233	0.51	+1.3
2,496,041	-		MIT1002_02233	0.56	-3.9
2,496,077	+		MIT1002_02233	0.59	-0.1
2,496,097	+		MIT1002_02233	0.60	+0.5
2,496,218	+		MIT1002_02233	0.69	-0.4
2,496,226	-		MIT1002_02233	0.70	-0.2
2,496,257	-		MIT1002_02233	0.72	+0.3
2,496,292	+		MIT1002_02233	0.75	-1.0
2,496,313	+		MIT1002_02233	0.76	-0.1
2,496,313	+		MIT1002_02233	0.76	+0.1
2,496,316	+		MIT1002_02233	0.76	+0.3
2,496,316	+		MIT1002_02233	0.76	+0.5
2,496,316	+		MIT1002_02233	0.76	-1.9
2,496,316	+		MIT1002_02233	0.76	-2.1
2,496,324	-		MIT1002_02233	0.77	+0.8
2,496,324	-		MIT1002_02233	0.77	+0.1
2,496,324	-		MIT1002_02233	0.77	-0.8
2,496,324	-		MIT1002_02233	0.77	-1.2
2,496,405	-		MIT1002_02233	0.83	-1.3
2,496,407	+		MIT1002_02233	0.83	-1.1
2,496,415	-		MIT1002_02233	0.84	-0.7
2,496,455	+		MIT1002_02233	0.87	-0.9
2,496,463	-		MIT1002_02233	0.87	+0.6
2,496,541	+				-1.6
2,496,553	+				-0.4
2,496,581	+				-0.2
2,496,606	+				-0.5
2,496,611	+				-0.0
2,496,614	-				+2.0
2,496,621	-				-0.1
2,496,642	-				+0.2
2,496,642	-				-0.2
2,496,666	+				+0.1
2,496,717	+				-0.8
2,496,755	+				-0.5
2,496,755	+				-0.2
2,496,763	-				-0.3
2,496,763	-				-0.3
2,496,765	-				-1.4
2,496,809	-		MIT1002_02234	0.11	+1.3
2,496,827	+		MIT1002_02234	0.14	+1.1
2,497,067	-		MIT1002_02234	0.47	+0.3
2,497,129	+		MIT1002_02234	0.56	+0.7
2,497,182	+		MIT1002_02234	0.63	+0.7
2,497,204	+		MIT1002_02234	0.66	+0.7
2,497,271	+		MIT1002_02234	0.75	+0.3
2,497,279	-		MIT1002_02234	0.77	+0.4
2,497,283	+		MIT1002_02234	0.77	+0.2
2,497,291	-		MIT1002_02234	0.78	-2.0
2,497,291	-		MIT1002_02234	0.78	-0.6
2,497,295	+		MIT1002_02234	0.79	-0.7
2,497,308	+		MIT1002_02234	0.81	+1.1
2,497,326	-		MIT1002_02234	0.83	+0.9
2,497,328	+		MIT1002_02234	0.83	-1.5
2,497,328	+		MIT1002_02234	0.83	+1.7
2,497,328	+		MIT1002_02234	0.83	-0.7
2,497,336	-		MIT1002_02234	0.84	+0.9
2,497,493	-				+0.1
2,497,535	+				-0.1
2,497,627	+		MIT1002_02235	0.11	-0.1