Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02085

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 2
2,346,480	+		MIT1002_02084	0.60	-0.2
2,346,480	+		MIT1002_02084	0.60	+0.6
2,346,488	-		MIT1002_02084	0.60	-2.8
2,346,488	-		MIT1002_02084	0.60	-0.0
2,346,516	+		MIT1002_02084	0.61	-1.5
2,346,516	+		MIT1002_02084	0.61	+0.2
2,346,524	-		MIT1002_02084	0.62	+0.9
2,346,524	-		MIT1002_02084	0.62	-1.8
2,346,531	-		MIT1002_02084	0.62	-2.1
2,346,640	+		MIT1002_02084	0.66	-1.7
2,346,672	+		MIT1002_02084	0.68	+0.4
2,346,677	+		MIT1002_02084	0.68	-1.3
2,346,677	+		MIT1002_02084	0.68	-2.2
2,346,680	-		MIT1002_02084	0.68	+0.2
2,346,685	-		MIT1002_02084	0.68	+0.3
2,346,685	-		MIT1002_02084	0.68	-0.0
2,346,707	+		MIT1002_02084	0.69	-0.7
2,346,708	+		MIT1002_02084	0.69	-0.3
2,346,708	+		MIT1002_02084	0.69	+0.2
2,346,708	+		MIT1002_02084	0.69	+0.0
2,346,716	-		MIT1002_02084	0.70	-0.5
2,346,716	-		MIT1002_02084	0.70	+1.5
2,346,787	-		MIT1002_02084	0.72	-0.3
2,346,795	+		MIT1002_02084	0.73	+0.2
2,346,795	+		MIT1002_02084	0.73	+0.5
2,346,803	-		MIT1002_02084	0.73	-0.3
2,346,803	-		MIT1002_02084	0.73	-0.1
2,346,803	-		MIT1002_02084	0.73	-0.6
2,346,803	-		MIT1002_02084	0.73	-0.7
2,346,803	-		MIT1002_02084	0.73	-0.6
2,346,833	+		MIT1002_02084	0.74	+0.0
2,346,877	+		MIT1002_02084	0.76	+1.1
2,346,935	-		MIT1002_02084	0.78	+2.5
2,346,968	+		MIT1002_02084	0.80	-2.0
2,346,969	+		MIT1002_02084	0.80	-0.4
2,346,983	-		MIT1002_02084	0.80	+0.6
2,347,036	-		MIT1002_02084	0.83	+0.5
2,347,081	-		MIT1002_02084	0.84	+1.1
2,347,112	+		MIT1002_02084	0.86	+0.1
2,347,143	-		MIT1002_02084	0.87	-2.4
2,347,154	-		MIT1002_02084	0.87	+1.5
2,347,173	-		MIT1002_02084	0.88	-0.2
2,347,183	-		MIT1002_02084	0.88	+0.3
2,347,234	+				-0.7
2,347,251	-				+0.3
2,347,274	+				-1.3
2,347,280	-				-0.2
2,347,294	-				-0.7
2,347,306	-				-0.1
2,347,584	+		MIT1002_02085	0.11	-0.8
2,347,592	-		MIT1002_02085	0.12	+0.3
2,347,597	-		MIT1002_02085	0.12	-1.0
2,347,779	+		MIT1002_02085	0.30	-0.6
2,348,110	+		MIT1002_02085	0.63	+0.2
2,348,220	+		MIT1002_02085	0.74	-0.3
2,348,244	+		MIT1002_02085	0.76	+0.1
2,348,249	+		MIT1002_02085	0.76	-1.7
2,348,252	-		MIT1002_02085	0.77	+0.2
2,348,252	-		MIT1002_02085	0.77	-1.6
2,348,252	-		MIT1002_02085	0.77	-0.3
2,348,252	-		MIT1002_02085	0.77	-0.6
2,348,252	-		MIT1002_02085	0.77	-0.1
2,348,252	-		MIT1002_02085	0.77	-0.3
2,348,268	+		MIT1002_02085	0.78	+1.6
2,348,312	+		MIT1002_02085	0.83	-0.8
2,348,391	-				-0.5
2,348,429	-				+1.3
2,348,449	-				-0.9
2,348,533	+				+0.3
2,348,533	+				+3.1
2,348,541	-				-0.4
2,348,541	-				+1.2
2,348,730	+				-0.1
2,348,924	+				-2.1
2,348,992	-		MIT1002_02086	0.10	+0.1
2,349,056	+		MIT1002_02086	0.14	+1.1
2,349,064	-		MIT1002_02086	0.14	-0.6
2,349,066	+		MIT1002_02086	0.15	+1.6
2,349,164	-		MIT1002_02086	0.20	-1.5
2,349,171	+		MIT1002_02086	0.21	+0.7
2,349,202	-		MIT1002_02086	0.23	-0.0
2,349,275	+		MIT1002_02086	0.27	-1.0
2,349,283	-		MIT1002_02086	0.27	+0.1
2,349,441	-		MIT1002_02086	0.37	+0.1