Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02039

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 2
2,290,104	+		MIT1002_02038	0.50	-0.6
2,290,110	+		MIT1002_02038	0.50	-0.7
2,290,144	+		MIT1002_02038	0.52	+1.6
2,290,152	-		MIT1002_02038	0.52	-1.7
2,290,152	-		MIT1002_02038	0.52	-1.4
2,290,188	+		MIT1002_02038	0.54	-0.3
2,290,197	-		MIT1002_02038	0.55	+1.9
2,290,197	-		MIT1002_02038	0.55	+1.0
2,290,197	-		MIT1002_02038	0.55	+0.1
2,290,230	-		MIT1002_02038	0.56	+0.9
2,290,258	+		MIT1002_02038	0.58	-0.2
2,290,284	-		MIT1002_02038	0.59	+0.1
2,290,304	-		MIT1002_02038	0.60	+0.3
2,290,342	+		MIT1002_02038	0.62	-0.3
2,290,441	-		MIT1002_02038	0.67	+0.8
2,290,445	+		MIT1002_02038	0.67	-0.2
2,290,534	-		MIT1002_02038	0.72	-0.9
2,290,534	-		MIT1002_02038	0.72	-1.4
2,290,568	+		MIT1002_02038	0.74	-0.4
2,290,583	-		MIT1002_02038	0.75	+1.5
2,290,667	+		MIT1002_02038	0.79	+0.2
2,290,697	+		MIT1002_02038	0.80	+1.0
2,290,797	+		MIT1002_02038	0.86	-0.9
2,290,869	+		MIT1002_02038	0.89	+0.1
2,290,877	-		MIT1002_02038	0.90	+1.1
2,290,889	+				+0.3
2,290,910	+				+1.4
2,290,918	-				-0.5
2,290,918	-				-1.1
2,291,175	-				-1.2
2,291,244	+				+0.3
2,291,280	-		MIT1002_02039	0.11	+0.8
2,291,280	-		MIT1002_02039	0.11	-0.7
2,291,378	-		MIT1002_02039	0.16	+0.1
2,291,400	-		MIT1002_02039	0.18	+1.4
2,291,473	-		MIT1002_02039	0.22	+1.0
2,291,486	-		MIT1002_02039	0.23	-0.4
2,291,550	+		MIT1002_02039	0.26	-1.8
2,291,650	+		MIT1002_02039	0.32	+0.5
2,291,651	-		MIT1002_02039	0.32	-0.9
2,291,651	-		MIT1002_02039	0.32	-0.5
2,291,661	-		MIT1002_02039	0.33	+0.4
2,291,666	-		MIT1002_02039	0.33	-3.3
2,291,682	+		MIT1002_02039	0.34	+0.1
2,291,685	-		MIT1002_02039	0.34	-0.3
2,291,695	-		MIT1002_02039	0.35	-0.9
2,291,706	+		MIT1002_02039	0.35	-0.9
2,291,706	+		MIT1002_02039	0.35	-0.8
2,291,716	+		MIT1002_02039	0.36	-1.2
2,291,716	+		MIT1002_02039	0.36	-0.3
2,291,724	-		MIT1002_02039	0.36	-2.0
2,291,811	+		MIT1002_02039	0.41	-1.1
2,291,811	+		MIT1002_02039	0.41	-1.4
2,291,811	+		MIT1002_02039	0.41	+0.2
2,291,819	+		MIT1002_02039	0.42	-0.3
2,291,834	+		MIT1002_02039	0.42	-0.6
2,291,842	-		MIT1002_02039	0.43	+1.2
2,291,848	+		MIT1002_02039	0.43	-0.7
2,291,976	+		MIT1002_02039	0.51	-0.8
2,292,008	+		MIT1002_02039	0.52	-0.3
2,292,120	-		MIT1002_02039	0.59	-0.2
2,292,132	-		MIT1002_02039	0.59	+1.2
2,292,157	+		MIT1002_02039	0.61	+0.7
2,292,167	+		MIT1002_02039	0.61	-0.7
2,292,283	+		MIT1002_02039	0.68	+0.1
2,292,286	+		MIT1002_02039	0.68	-2.1
2,292,289	-		MIT1002_02039	0.68	-2.4
2,292,294	-		MIT1002_02039	0.69	-1.4
2,292,341	+		MIT1002_02039	0.71	+1.0
2,292,350	-		MIT1002_02039	0.72	+0.1
2,292,359	+		MIT1002_02039	0.72	-0.4
2,292,359	+		MIT1002_02039	0.72	-0.4
2,292,367	-		MIT1002_02039	0.73	-0.3
2,292,367	-		MIT1002_02039	0.73	+0.2
2,292,431	+		MIT1002_02039	0.76	-0.0
2,292,431	+		MIT1002_02039	0.76	-3.2
2,292,439	-		MIT1002_02039	0.77	-0.6
2,292,439	-		MIT1002_02039	0.77	-0.2
2,292,439	-		MIT1002_02039	0.77	-0.4
2,292,690	-				-0.2
2,292,758	-				-0.9
2,292,816	+				+0.0
2,292,824	-				+0.2
2,292,824	-				+0.2
2,293,047	+				-0.0
2,293,047	+				-1.1
2,293,256	-		MIT1002_02040	0.61	+1.5
2,293,307	+				-2.7
2,293,424	+				-1.6
2,293,424	+				+0.1
2,293,432	-				+0.3
2,293,641	-		MIT1002_02041	0.41	-1.3
2,293,695	+		MIT1002_02041	0.52	+0.6