Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01638

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 2
1,809,666	+				-0.4
1,809,666	+				-3.6
1,809,707	+				-4.5
1,809,781	+		MIT1002_01638	0.33	-4.1
1,809,781	+		MIT1002_01638	0.33	-3.8
1,809,781	+		MIT1002_01638	0.33	-2.2
1,809,781	+		MIT1002_01638	0.33	-3.6
1,809,789	-		MIT1002_01638	0.35	-2.6
1,809,789	-		MIT1002_01638	0.35	-1.0
1,809,789	-		MIT1002_01638	0.35	-2.8
1,809,789	-		MIT1002_01638	0.35	-2.6
1,809,842	-		MIT1002_01638	0.53	-2.2
1,809,842	-		MIT1002_01638	0.53	-1.4
1,809,884	+		MIT1002_01638	0.67	+1.0
1,809,925	-		MIT1002_01638	0.81	-1.7
1,809,992	-				+0.3
1,810,128	-				-1.5
1,810,173	-		MIT1002_01639	0.14	-0.3
1,810,184	+		MIT1002_01639	0.16	-0.0
1,810,223	-		MIT1002_01639	0.23	+0.8
1,810,254	+		MIT1002_01639	0.29	-1.1
1,810,262	-		MIT1002_01639	0.30	-0.4
1,810,307	+		MIT1002_01639	0.38	-0.3
1,810,307	+		MIT1002_01639	0.38	+0.4
1,810,307	+		MIT1002_01639	0.38	+0.7
1,810,307	+		MIT1002_01639	0.38	+0.1
1,810,307	+		MIT1002_01639	0.38	+0.2
1,810,315	-		MIT1002_01639	0.40	-3.0
1,810,320	+		MIT1002_01639	0.41	-1.2
1,810,377	+		MIT1002_01639	0.51	-0.8
1,810,417	+		MIT1002_01639	0.59	+0.0
1,810,512	+		MIT1002_01639	0.76	+0.1
1,810,520	-		MIT1002_01639	0.77	+0.5
1,810,595	+				-0.5
1,810,598	-				+0.2
1,810,685	+				+1.1
1,810,705	-				+0.1
1,810,718	-				-6.1
1,810,830	+				-0.4
1,810,830	+				-0.7
1,810,830	+				-1.8
1,810,830	+				+0.1
1,810,838	-				-0.3
1,810,838	-				-1.1
1,810,838	-				-0.9
1,810,838	-				-1.1
1,810,841	-				-1.0
1,810,851	+				-1.3
1,810,888	+				-0.3
1,810,896	-				-0.0
1,810,896	-				+2.1
1,810,969	+				-0.3