Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01354

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 2
1,497,119	-				-1.3
1,497,119	-				-0.7
1,497,119	-				+1.3
1,497,136	-				-1.1
1,497,160	+				+1.1
1,497,231	+				-0.7
1,497,236	+				+1.5
1,497,238	+				-0.5
1,497,246	-				+0.5
1,497,269	-				-0.8
1,497,290	-				+0.2
1,497,320	-				+0.4
1,497,408	+				+1.6
1,497,421	-				-0.8
1,497,539	-		MIT1002_01353	0.23	-0.8
1,497,569	-		MIT1002_01353	0.28	-1.3
1,497,584	-		MIT1002_01353	0.31	-0.2
1,497,586	+		MIT1002_01353	0.31	+1.0
1,497,590	+		MIT1002_01353	0.32	+1.5
1,497,614	+		MIT1002_01353	0.36	-0.8
1,497,637	+		MIT1002_01353	0.40	-0.5
1,497,671	-		MIT1002_01353	0.46	-0.7
1,497,671	-		MIT1002_01353	0.46	+0.6
1,497,678	-		MIT1002_01353	0.48	+1.2
1,497,705	+		MIT1002_01353	0.52	-0.7
1,497,714	-		MIT1002_01353	0.54	+0.6
1,497,725	+		MIT1002_01353	0.56	+0.2
1,497,827	+		MIT1002_01353	0.74	-0.1
1,497,841	+		MIT1002_01353	0.76	+0.3
1,497,859	-		MIT1002_01353	0.80	+0.2
1,497,962	-				-0.5
1,498,051	-				-0.8
1,498,193	+				-1.6
1,498,196	-				+0.4
1,498,196	-				+1.3
1,498,288	+		MIT1002_01354	0.11	-0.2
1,498,296	-		MIT1002_01354	0.12	+0.4
1,498,300	+		MIT1002_01354	0.12	+0.5
1,498,463	+		MIT1002_01354	0.22	+0.3
1,498,471	-		MIT1002_01354	0.22	+1.2
1,498,547	+		MIT1002_01354	0.27	-0.9
1,498,560	-		MIT1002_01354	0.28	-0.4
1,498,631	-		MIT1002_01354	0.32	-0.9
1,498,743	+		MIT1002_01354	0.39	-0.8
1,498,822	+		MIT1002_01354	0.44	-0.1
1,498,856	+		MIT1002_01354	0.47	+3.0
1,498,882	+		MIT1002_01354	0.48	-0.4
1,498,894	+		MIT1002_01354	0.49	+1.2
1,498,966	-		MIT1002_01354	0.53	+0.5
1,498,968	+		MIT1002_01354	0.54	+0.5
1,499,120	+		MIT1002_01354	0.63	+0.1
1,499,163	+		MIT1002_01354	0.66	+2.0
1,499,175	+		MIT1002_01354	0.66	+0.7
1,499,191	+		MIT1002_01354	0.67	+0.2
1,499,191	+		MIT1002_01354	0.67	+1.4
1,499,197	-		MIT1002_01354	0.68	+0.4
1,499,199	-		MIT1002_01354	0.68	-0.4
1,499,225	-		MIT1002_01354	0.70	+0.7
1,499,328	+		MIT1002_01354	0.76	+0.9
1,499,336	-		MIT1002_01354	0.77	-0.0
1,499,358	-		MIT1002_01354	0.78	+0.3
1,499,368	-		MIT1002_01354	0.79	-0.3
1,499,694	-				-0.9
1,499,708	-				-0.7
1,499,715	+				-0.3
1,499,723	-				-0.9
1,499,724	-				-3.0
1,499,758	-		MIT1002_01355	0.12	+0.1
1,499,760	+		MIT1002_01355	0.13	+0.4
1,499,760	+		MIT1002_01355	0.13	+0.2
1,499,760	+		MIT1002_01355	0.13	+1.4
1,499,760	+		MIT1002_01355	0.13	+0.2
1,499,760	+		MIT1002_01355	0.13	-0.2
1,499,760	+		MIT1002_01355	0.13	-0.7
1,499,760	+		MIT1002_01355	0.13	+0.3
1,499,768	-		MIT1002_01355	0.15	+0.7
1,499,768	-		MIT1002_01355	0.15	-0.5
1,499,768	-		MIT1002_01355	0.15	-0.7
1,499,768	-		MIT1002_01355	0.15	-0.1
1,499,768	-		MIT1002_01355	0.15	-1.4
1,499,768	-		MIT1002_01355	0.15	+0.5
1,499,768	-		MIT1002_01355	0.15	+0.5
1,499,768	-		MIT1002_01355	0.15	-0.0
1,499,768	-		MIT1002_01355	0.15	+0.4
1,499,768	-		MIT1002_01355	0.15	-1.3
1,499,768	-		MIT1002_01355	0.15	-1.3
1,499,835	-		MIT1002_01355	0.30	+0.3
1,499,890	-		MIT1002_01355	0.42	-0.2
1,499,947	+		MIT1002_01355	0.55	+0.5
1,499,974	+		MIT1002_01355	0.61	-0.1
1,499,994	-		MIT1002_01355	0.66	-0.9
1,500,031	-		MIT1002_01355	0.74	-0.2
1,500,096	-		MIT1002_01355	0.89	-0.0
1,500,102	+				-0.9
1,500,122	-				-0.2
1,500,129	-				-0.1
1,500,234	+				-0.1
1,500,234	-				-0.2
1,500,316	-		MIT1002_01356	0.13	-0.1
1,500,352	-		MIT1002_01356	0.16	+0.1
1,500,391	+		MIT1002_01356	0.19	+1.5
1,500,457	-		MIT1002_01356	0.24	-0.4
1,500,484	+		MIT1002_01356	0.26	+0.7
1,500,492	-		MIT1002_01356	0.27	-1.4
1,500,493	-		MIT1002_01356	0.27	+0.1
1,500,558	-		MIT1002_01356	0.32	+0.5
1,500,558	-		MIT1002_01356	0.32	-0.2
1,500,654	+		MIT1002_01356	0.40	-0.7
1,500,662	-		MIT1002_01356	0.41	+0.2
1,500,676	+		MIT1002_01356	0.42	-1.8
1,500,684	-		MIT1002_01356	0.42	-0.7