Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01345

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 2
1,487,835	-				+0.7
1,487,894	+				-0.2
1,487,894	+				-0.4
1,487,922	-				-1.5
1,487,986	+		MIT1002_01345	0.32	-3.0
1,487,996	-		MIT1002_01345	0.43	-3.0
1,487,996	-		MIT1002_01345	0.43	-2.5
1,488,006	-		MIT1002_01345	0.54	-2.3
1,488,042	-				-0.8
1,488,222	-				+0.1
1,488,252	+				+2.0
1,488,252	+				+1.6
1,488,265	-				+0.3
1,488,351	-		MIT1002_01346	0.27	-0.4
1,488,356	-		MIT1002_01346	0.28	-1.3
1,488,420	-		MIT1002_01346	0.43	+1.1
1,488,462	+		MIT1002_01346	0.52	-0.4
1,488,496	+		MIT1002_01346	0.60	+0.1
1,488,511	+		MIT1002_01346	0.63	+0.3
1,488,511	+		MIT1002_01346	0.63	+0.4
1,488,519	-		MIT1002_01346	0.65	+1.1
1,488,519	-		MIT1002_01346	0.65	-1.9
1,488,519	-		MIT1002_01346	0.65	+0.1
1,488,519	-		MIT1002_01346	0.65	+0.3
1,488,530	+		MIT1002_01346	0.68	-0.1
1,488,530	+		MIT1002_01346	0.68	-0.5
1,488,530	+		MIT1002_01346	0.68	+1.3
1,488,531	+		MIT1002_01346	0.68	-0.4
1,488,538	-		MIT1002_01346	0.70	-0.1
1,488,538	-		MIT1002_01346	0.70	+1.0
1,488,538	-		MIT1002_01346	0.70	-0.3
1,488,538	-		MIT1002_01346	0.70	+0.0
1,488,538	-		MIT1002_01346	0.70	+0.7
1,488,538	-		MIT1002_01346	0.70	-0.7
1,488,624	-		MIT1002_01346	0.89	-0.5
1,488,687	+				+0.2
1,488,723	+				-1.1
1,488,731	-				+1.1
1,488,789	-				+0.7
1,488,789	-				+0.8
1,488,803	+				+0.0
1,488,882	+				+0.5
1,488,882	+				-0.6