Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01175

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 2
1,289,683	-				+0.8
1,289,685	+				+0.4
1,289,685	+				+0.0
1,289,725	-				-0.8
1,289,827	+		MIT1002_01173	0.18	-2.2
1,289,899	-		MIT1002_01173	0.45	+0.4
1,289,908	+		MIT1002_01173	0.48	+0.5
1,289,908	+		MIT1002_01173	0.48	+0.9
1,289,908	+		MIT1002_01173	0.48	-1.0
1,289,908	+		MIT1002_01173	0.48	+0.4
1,289,908	+		MIT1002_01173	0.48	+0.4
1,289,915	+		MIT1002_01173	0.51	+3.8
1,289,916	-		MIT1002_01173	0.52	+0.5
1,289,916	-		MIT1002_01173	0.52	+0.3
1,289,916	-		MIT1002_01173	0.52	+0.9
1,289,916	-		MIT1002_01173	0.52	+0.2
1,290,099	-				-0.4
1,290,101	+				-0.9
1,290,166	-		MIT1002_01174	0.19	-0.1
1,290,233	-		MIT1002_01174	0.29	+0.0
1,290,280	-		MIT1002_01174	0.37	-0.8
1,290,301	-		MIT1002_01174	0.40	-0.6
1,290,332	-		MIT1002_01174	0.45	-0.3
1,290,334	+		MIT1002_01174	0.45	-0.3
1,290,343	+		MIT1002_01174	0.47	+0.2
1,290,351	-		MIT1002_01174	0.48	-0.6
1,290,385	-		MIT1002_01174	0.53	+2.3
1,290,395	-		MIT1002_01174	0.55	-0.1
1,290,408	+		MIT1002_01174	0.57	+0.9
1,290,408	+		MIT1002_01174	0.57	-1.8
1,290,416	-		MIT1002_01174	0.58	-0.6
1,290,416	-		MIT1002_01174	0.58	-1.2
1,290,416	-		MIT1002_01174	0.58	+0.4
1,290,467	+		MIT1002_01174	0.66	-0.2
1,290,536	+		MIT1002_01174	0.76	-0.4
1,290,585	-		MIT1002_01174	0.84	-0.6
1,290,628	-				-0.8
1,290,651	+				-3.1
1,290,697	-				-0.1
1,290,747	-		MIT1002_01175	0.11	-1.3
1,290,868	+		MIT1002_01175	0.26	+0.1
1,290,877	+		MIT1002_01175	0.27	-0.9
1,290,913	+		MIT1002_01175	0.31	-0.6
1,290,921	-		MIT1002_01175	0.32	+0.1
1,290,987	-		MIT1002_01175	0.40	+0.7
1,290,992	-		MIT1002_01175	0.40	-0.7
1,290,992	-		MIT1002_01175	0.40	+0.6
1,291,027	+		MIT1002_01175	0.44	-0.6
1,291,027	+		MIT1002_01175	0.44	-0.9
1,291,035	-		MIT1002_01175	0.45	+1.0
1,291,104	+		MIT1002_01175	0.53	-0.9
1,291,136	+		MIT1002_01175	0.57	-1.2
1,291,205	+		MIT1002_01175	0.65	-0.9
1,291,213	-		MIT1002_01175	0.66	-2.4
1,291,222	-		MIT1002_01175	0.67	-0.4
1,291,490	+				-3.0
1,291,497	-				-1.7
1,291,498	+				-0.1
1,291,498	+				-0.0
1,291,571	-				-0.7
1,291,644	+				-0.2
1,291,652	-				+0.2
1,291,652	-				+1.1
1,291,654	-				+0.2
1,291,696	-				+0.0
1,291,703	+				+1.6
1,291,912	+				-0.2
1,291,912	+				-1.4
1,291,912	+				-1.9
1,291,920	-				+0.4
1,292,015	+				+0.6
1,292,058	+				+0.8
1,292,145	+				+0.3
1,292,145	+				-0.1
1,292,145	+				+0.6
1,292,145	+				+1.8
1,292,145	+				+0.2
1,292,153	-		MIT1002_01177	0.10	-0.2
1,292,153	-		MIT1002_01177	0.10	+1.2
1,292,153	-		MIT1002_01177	0.10	+0.6
1,292,200	+		MIT1002_01177	0.17	+0.6
1,292,247	-		MIT1002_01177	0.23	+0.1
1,292,320	+		MIT1002_01177	0.33	+0.7
1,292,361	+		MIT1002_01177	0.39	+0.2
1,292,369	-		MIT1002_01177	0.40	+1.1
1,292,375	-		MIT1002_01177	0.41	-0.6
1,292,431	+		MIT1002_01177	0.49	-0.2
1,292,471	-		MIT1002_01177	0.54	-1.5