Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01135

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 2
1,245,150	-				+0.7
1,245,207	+				-0.7
1,245,215	+				-0.3
1,245,215	+				-0.9
1,245,215	+				+1.5
1,245,215	+				-5.1
1,245,215	-				+0.6
1,245,217	+				-0.8
1,245,223	-				+0.2
1,245,223	-				-3.2
1,245,223	-				-1.2
1,245,223	-				+0.0
1,245,233	-				-0.3
1,245,251	+				+1.0
1,245,251	+				-0.5
1,245,251	+				+0.5
1,245,251	+				+0.4
1,245,251	+				-0.6
1,245,251	+				-0.3
1,245,251	+				+0.2
1,245,251	+				+0.2
1,245,251	+				+0.2
1,245,251	+				-0.2
1,245,259	-				+1.2
1,245,259	-				-1.5
1,245,259	-				-0.4
1,245,259	-				+0.7
1,245,259	-				+0.4
1,245,259	-				-0.5
1,245,259	-				-0.7
1,245,259	-				-0.2
1,245,259	-				+0.4
1,245,259	-				-0.0
1,245,259	-				+0.9
1,245,259	-				-0.8
1,245,259	-				+0.7
1,245,259	-				-0.7
1,245,259	-				-1.0
1,245,372	+				+0.5
1,245,389	-				-0.4
1,245,394	+				+0.3
1,245,500	+		MIT1002_01133	0.73	+1.6
1,245,549	+				+0.2
1,245,590	-				+0.2
1,245,596	-				-0.0
1,245,665	+				+0.3
1,245,673	-				-2.4
1,245,673	-				+0.2
1,245,673	-				-0.1
1,245,673	-				+1.3
1,245,761	-				-0.5
1,245,791	+				+0.6
1,245,791	-				-1.6
1,245,805	+		MIT1002_01134	0.14	-0.2
1,245,812	+		MIT1002_01134	0.16	+0.9
1,245,870	-		MIT1002_01134	0.35	-0.6
1,246,013	-		MIT1002_01134	0.81	-0.0
1,246,046	-				+0.3
1,246,076	+				-1.5
1,246,092	+				+2.6
1,246,092	+				-0.4
1,246,092	+				-0.5
1,246,092	+				-0.9
1,246,099	+				-2.3
1,246,100	-				-0.1
1,246,100	-				-1.9
1,246,219	+				-2.2
1,246,283	-		MIT1002_01135	0.11	-0.2
1,246,338	-		MIT1002_01135	0.14	-1.5
1,246,399	-		MIT1002_01135	0.17	-2.0
1,246,494	-		MIT1002_01135	0.22	+0.8
1,246,494	-		MIT1002_01135	0.22	-2.4
1,246,494	-		MIT1002_01135	0.22	-2.2
1,246,535	+		MIT1002_01135	0.24	-0.9
1,246,538	-		MIT1002_01135	0.25	-0.9
1,246,538	-		MIT1002_01135	0.25	+0.1
1,246,543	-		MIT1002_01135	0.25	-1.2
1,246,543	-		MIT1002_01135	0.25	-0.6
1,246,547	+		MIT1002_01135	0.25	-0.7
1,246,547	+		MIT1002_01135	0.25	+1.0
1,246,547	+		MIT1002_01135	0.25	+0.2
1,246,547	+		MIT1002_01135	0.25	-0.2
1,246,547	+		MIT1002_01135	0.25	-0.8
1,246,555	-		MIT1002_01135	0.26	+0.6
1,246,555	-		MIT1002_01135	0.26	+1.9
1,246,555	-		MIT1002_01135	0.26	-0.4
1,246,555	-		MIT1002_01135	0.26	-3.0
1,246,568	+		MIT1002_01135	0.26	-0.8
1,246,585	+		MIT1002_01135	0.27	-0.2
1,246,586	+		MIT1002_01135	0.27	+2.1
1,246,694	-		MIT1002_01135	0.33	-0.8
1,246,696	+		MIT1002_01135	0.33	+0.6
1,246,704	-		MIT1002_01135	0.34	-2.4
1,246,709	-		MIT1002_01135	0.34	-1.1
1,246,720	-		MIT1002_01135	0.35	-1.7
1,246,725	-		MIT1002_01135	0.35	-1.2
1,246,799	-		MIT1002_01135	0.39	-0.8
1,246,819	-		MIT1002_01135	0.40	-1.5
1,246,819	-		MIT1002_01135	0.40	-0.4
1,246,824	-		MIT1002_01135	0.40	-0.8
1,246,855	+		MIT1002_01135	0.42	-1.2
1,246,948	+		MIT1002_01135	0.47	-0.3
1,246,957	-		MIT1002_01135	0.48	-0.8
1,247,211	-		MIT1002_01135	0.62	-0.5
1,247,233	+		MIT1002_01135	0.63	+0.6
1,247,272	-		MIT1002_01135	0.65	-1.7
1,247,298	-		MIT1002_01135	0.66	-3.0
1,247,308	+		MIT1002_01135	0.67	+0.2
1,247,318	-		MIT1002_01135	0.67	-0.1
1,247,320	-		MIT1002_01135	0.68	-0.2
1,247,397	-		MIT1002_01135	0.72	-0.5
1,247,397	-		MIT1002_01135	0.72	-1.3
1,247,447	+		MIT1002_01135	0.75	-0.8
1,247,447	+		MIT1002_01135	0.75	-2.0
1,247,490	+		MIT1002_01135	0.77	-0.3
1,247,502	+		MIT1002_01135	0.78	-0.2
1,247,510	-		MIT1002_01135	0.78	+0.2
1,247,512	+		MIT1002_01135	0.78	-0.6
1,247,545	-		MIT1002_01135	0.80	-1.1
1,247,545	-		MIT1002_01135	0.80	-1.2
1,247,545	-		MIT1002_01135	0.80	+0.4
1,247,545	-		MIT1002_01135	0.80	-1.8
1,247,588	+		MIT1002_01135	0.82	-0.3
1,247,604	-		MIT1002_01135	0.83	-0.9
1,247,609	-		MIT1002_01135	0.83	-0.1
1,247,622	+		MIT1002_01135	0.84	-0.3
1,247,648	+		MIT1002_01135	0.86	-0.4
1,247,686	+		MIT1002_01135	0.88	+0.0
1,247,704	-		MIT1002_01135	0.89	-2.6
1,247,855	+				-0.6
1,247,865	+				+1.0
1,247,868	-				+0.2
1,247,872	+				-2.5
1,247,880	-				-0.4
1,247,890	-				-1.4
1,247,905	+				-1.6
1,247,910	+				-0.0
1,247,942	+				+1.6
1,247,950	+				+2.6
1,247,958	+				+0.4
1,248,046	-		MIT1002_01136	0.11	-1.6
1,248,086	-		MIT1002_01136	0.14	-0.1
1,248,241	+		MIT1002_01136	0.28	+1.1
1,248,249	-		MIT1002_01136	0.29	-0.7
1,248,257	-		MIT1002_01136	0.30	-0.1
1,248,429	+		MIT1002_01136	0.45	-1.7
1,248,457	-		MIT1002_01136	0.47	-0.1
1,248,516	+		MIT1002_01136	0.53	-0.3
1,248,516	+		MIT1002_01136	0.53	+0.4
1,248,534	-		MIT1002_01136	0.54	-3.7
1,248,582	+		MIT1002_01136	0.59	-2.9
1,248,615	+		MIT1002_01136	0.62	+0.1
1,248,649	+		MIT1002_01136	0.65	+0.0
1,248,732	+		MIT1002_01136	0.72	-0.8
1,248,757	+		MIT1002_01136	0.74	-0.6
1,248,817	+		MIT1002_01136	0.80	-0.0
1,248,823	+		MIT1002_01136	0.80	-0.8
1,248,891	-		MIT1002_01136	0.86	+0.3