Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01128

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment A, time point 2
1,240,172	-				+0.4
1,240,223	+				-0.0
1,240,233	+				+1.0
1,240,233	+				+0.3
1,240,233	+				+1.2
1,240,241	-				-0.8
1,240,286	+				-0.8
1,240,286	+				-0.5
1,240,294	-				-0.0
1,240,318	-				+0.7
1,240,326	+				-0.5
1,240,333	-				-0.8
1,240,469	+		MIT1002_01127	0.13	-0.8
1,240,476	+		MIT1002_01127	0.15	-0.0
1,240,477	-		MIT1002_01127	0.15	-1.0
1,240,493	-		MIT1002_01127	0.18	-2.9
1,240,660	-		MIT1002_01127	0.55	+0.2
1,240,660	-		MIT1002_01127	0.55	+0.9
1,240,665	-		MIT1002_01127	0.56	+1.1
1,240,667	+		MIT1002_01127	0.56	-0.1
1,240,675	-		MIT1002_01127	0.58	-0.7
1,240,677	+		MIT1002_01127	0.58	+0.9
1,240,685	-		MIT1002_01127	0.60	+0.5
1,240,707	-		MIT1002_01127	0.65	+0.5
1,240,747	-		MIT1002_01127	0.74	-2.3
1,240,810	-		MIT1002_01127	0.87	+0.2
1,240,865	-				+1.2
1,240,875	+				-0.3
1,240,875	+				+0.0
1,240,934	+				+0.4
1,240,979	+				+0.2
1,240,979	+				-0.7
1,240,987	-				-1.4
1,243,814	-				-4.0
1,243,814	-				-2.9
1,243,881	-				-3.8
1,243,886	+				-3.1
1,243,928	+		MIT1002_01129	0.16	-3.7
1,243,928	+		MIT1002_01129	0.16	-2.4
1,243,944	-		MIT1002_01129	0.24	-3.2
1,243,953	-		MIT1002_01129	0.29	-1.7
1,243,954	-		MIT1002_01129	0.30	-3.7
1,244,078	+				-0.9
1,244,122	-				+0.3
1,244,123	+				-1.5
1,244,174	+				+0.8
1,244,230	+				-0.2
1,244,236	+				+1.2
1,244,236	+				-0.2
1,244,236	+				-0.9
1,244,244	-				-0.3
1,244,244	-				+0.2
1,244,279	+				-1.4
1,244,280	+				-2.4
1,244,288	-				+0.3
1,244,307	+				+0.4
1,244,315	-				+1.7
1,244,315	-				+1.2
1,244,315	-				+0.9
1,244,472	-				+0.0