Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_04120

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 1
4,619,941	-				+1.4
4,619,941	-				+0.5
4,619,941	-				+0.6
4,619,941	-				+0.6
4,619,941	-				+0.9
4,619,941	-				+0.3
4,619,948	-				-0.1
4,620,972	-		MIT1002_04120	0.25	+0.7
4,621,194	-		MIT1002_04120	0.82	-1.8
4,621,333	-				-0.1
4,621,335	+				-3.1
4,621,343	-				+1.8
4,621,343	-				+1.4
4,621,415	-				+1.3
4,621,541	-				-0.2
4,621,553	+				-1.3
4,621,553	+				+0.5
4,621,553	+				+0.3
4,621,553	+				-0.2
4,621,561	-		MIT1002_04121	0.10	-0.7
4,621,633	+		MIT1002_04121	0.19	-3.1
4,621,638	+		MIT1002_04121	0.19	+0.8
4,621,641	-		MIT1002_04121	0.19	-0.6
4,621,641	-		MIT1002_04121	0.19	-1.5
4,621,681	-		MIT1002_04121	0.24	-0.0
4,621,728	-		MIT1002_04121	0.29	+0.3
4,621,730	+		MIT1002_04121	0.30	-0.2
4,621,730	+		MIT1002_04121	0.30	+0.8
4,621,739	-		MIT1002_04121	0.31	-0.9
4,621,769	-		MIT1002_04121	0.34	+0.8
4,621,769	-		MIT1002_04121	0.34	+0.6
4,621,840	+		MIT1002_04121	0.42	-0.3
4,621,900	-		MIT1002_04121	0.49	-1.2
4,621,939	-		MIT1002_04121	0.53	-2.3
4,621,973	+		MIT1002_04121	0.57	-1.1
4,622,120	+		MIT1002_04121	0.74	+0.7
4,622,120	+		MIT1002_04121	0.74	-0.7
4,622,120	+		MIT1002_04121	0.74	+1.1
4,622,120	+		MIT1002_04121	0.74	-1.1
4,622,128	-		MIT1002_04121	0.75	+0.4
4,622,128	-		MIT1002_04121	0.75	-1.3
4,622,128	-		MIT1002_04121	0.75	-1.0
4,622,128	-		MIT1002_04121	0.75	+0.5
4,622,128	-		MIT1002_04121	0.75	+0.8
4,622,188	+		MIT1002_04121	0.82	-2.3
4,622,211	+		MIT1002_04121	0.84	-0.2
4,622,211	+		MIT1002_04121	0.84	+0.1