Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03857

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 1
4,319,605	-		MIT1002_03855	0.78	+0.9
4,319,638	+				+0.2
4,319,638	+				+1.1
4,319,638	+				-0.1
4,319,643	+				+0.4
4,319,646	-				-0.1
4,319,648	+				-0.3
4,319,651	-				+0.3
4,319,656	-				-0.2
4,319,657	-				+1.0
4,319,657	-				-0.3
4,319,662	+				-0.1
4,319,679	+				-0.8
4,319,747	+				+0.4
4,319,747	+				+0.4
4,319,755	-				-1.5
4,319,767	+				-2.5
4,319,869	-				-0.7
4,319,869	-				+0.0
4,319,969	+				-1.1
4,319,969	+				-2.1
4,319,969	+				+0.6
4,319,977	-				-0.5
4,320,023	-		MIT1002_03856	0.12	-0.2
4,320,063	+		MIT1002_03856	0.22	-0.3
4,320,063	+		MIT1002_03856	0.22	-0.8
4,320,082	+		MIT1002_03856	0.26	-2.8
4,320,096	-		MIT1002_03856	0.29	+0.2
4,320,106	-		MIT1002_03856	0.32	+0.6
4,320,133	+		MIT1002_03856	0.38	+0.6
4,320,143	+		MIT1002_03856	0.40	+1.2
4,320,144	+		MIT1002_03856	0.41	-0.7
4,320,149	-		MIT1002_03856	0.42	-1.3
4,320,250	+		MIT1002_03856	0.66	-2.3
4,320,250	+		MIT1002_03856	0.66	+0.0
4,320,250	+		MIT1002_03856	0.66	+1.2
4,320,255	+		MIT1002_03856	0.67	-0.0
4,320,258	-		MIT1002_03856	0.68	+0.4
4,320,258	-		MIT1002_03856	0.68	+0.5
4,320,258	-		MIT1002_03856	0.68	-0.4
4,320,270	-		MIT1002_03856	0.70	-3.6
4,320,281	+		MIT1002_03856	0.73	-1.3
4,320,281	+		MIT1002_03856	0.73	-0.1
4,320,281	+		MIT1002_03856	0.73	-2.1
4,320,281	+		MIT1002_03856	0.73	+0.1
4,320,289	-		MIT1002_03856	0.75	+0.6
4,320,289	-		MIT1002_03856	0.75	-0.3
4,320,289	-		MIT1002_03856	0.75	-0.5
4,320,335	+		MIT1002_03856	0.86	+0.6
4,320,407	+				+0.4
4,320,483	-				-0.2
4,320,776	-		MIT1002_03857	0.17	-0.8
4,320,776	-		MIT1002_03857	0.17	+1.6
4,320,874	+		MIT1002_03857	0.24	+1.2
4,320,884	+		MIT1002_03857	0.25	-0.3
4,320,884	+		MIT1002_03857	0.25	-1.0
4,320,886	+		MIT1002_03857	0.25	+1.4
4,320,894	-		MIT1002_03857	0.25	+0.4
4,320,894	-		MIT1002_03857	0.25	+0.9
4,320,896	+		MIT1002_03857	0.25	-0.3
4,320,961	+		MIT1002_03857	0.30	+0.7
4,321,009	+		MIT1002_03857	0.33	-0.2
4,321,011	-		MIT1002_03857	0.34	-0.3
4,321,028	-		MIT1002_03857	0.35	-0.4
4,321,068	-		MIT1002_03857	0.38	-0.7
4,321,095	-		MIT1002_03857	0.40	-0.5
4,321,095	-		MIT1002_03857	0.40	-0.8
4,321,176	+		MIT1002_03857	0.45	-1.8
4,321,179	-		MIT1002_03857	0.46	-1.0
4,321,198	-		MIT1002_03857	0.47	+1.0
4,321,271	+		MIT1002_03857	0.52	+0.7
4,321,271	+		MIT1002_03857	0.52	-1.5
4,321,271	+		MIT1002_03857	0.52	+0.7
4,321,296	+		MIT1002_03857	0.54	-0.6
4,321,301	+		MIT1002_03857	0.54	-0.5
4,321,301	+		MIT1002_03857	0.54	-0.8
4,321,304	-		MIT1002_03857	0.55	-1.3
4,321,486	-		MIT1002_03857	0.68	+0.7
4,321,509	-		MIT1002_03857	0.69	+0.1
4,321,532	-		MIT1002_03857	0.71	-1.3
4,321,536	+		MIT1002_03857	0.71	+0.3
4,321,544	-		MIT1002_03857	0.72	+0.7
4,321,544	-		MIT1002_03857	0.72	+0.7
4,321,641	-		MIT1002_03857	0.79	-0.4
4,321,692	-		MIT1002_03857	0.82	-0.4
4,321,749	+		MIT1002_03857	0.86	-1.1
4,321,774	+		MIT1002_03857	0.88	-0.4
4,321,804	+				+0.7
4,321,839	+				-0.1
4,321,847	-				+1.0
4,321,887	-				+0.2
4,321,908	+				+0.0
4,321,923	-				-0.1
4,322,009	+				+1.0
4,322,085	-				-2.8
4,322,152	+				-2.5
4,322,152	+				+1.0
4,322,153	+				-1.3
4,322,160	-				+1.1
4,322,160	-				+0.3
4,322,161	-				-0.2
4,322,216	+				-0.1
4,322,216	+				+0.4
4,322,216	+				+0.5
4,322,216	+				-0.1
4,322,216	+				+1.8
4,322,224	-		MIT1002_03858	0.10	+0.5
4,322,243	+		MIT1002_03858	0.11	+1.2
4,322,249	+		MIT1002_03858	0.11	+0.1
4,322,251	-		MIT1002_03858	0.11	+0.5
4,322,262	-		MIT1002_03858	0.12	+0.4
4,322,301	+		MIT1002_03858	0.13	+1.7
4,322,341	+		MIT1002_03858	0.15	-3.2
4,322,348	-		MIT1002_03858	0.15	+0.3
4,322,414	-		MIT1002_03858	0.18	+1.6
4,322,438	+		MIT1002_03858	0.19	-0.4
4,322,438	+		MIT1002_03858	0.19	-0.5
4,322,446	-		MIT1002_03858	0.19	-1.5
4,322,456	+		MIT1002_03858	0.20	+0.8
4,322,458	+		MIT1002_03858	0.20	-0.3
4,322,468	+		MIT1002_03858	0.20	-0.2
4,322,468	+		MIT1002_03858	0.20	-0.1
4,322,518	-		MIT1002_03858	0.22	+0.5
4,322,684	-		MIT1002_03858	0.29	-0.1
4,322,737	+		MIT1002_03858	0.31	+0.3
4,322,744	+		MIT1002_03858	0.32	+0.3
4,322,754	-		MIT1002_03858	0.32	-0.3
4,322,799	-		MIT1002_03858	0.34	+0.2
4,322,805	+		MIT1002_03858	0.34	-0.6
4,322,893	-		MIT1002_03858	0.38	+0.2