Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03778

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 1
4,222,085	+				+0.9
4,222,093	-				+0.8
4,222,128	-				-0.8
4,222,183	+				+0.1
4,222,235	-		MIT1002_03777	0.11	+1.2
4,222,236	-		MIT1002_03777	0.11	-0.2
4,222,241	-		MIT1002_03777	0.12	+0.4
4,222,401	-		MIT1002_03777	0.33	+1.9
4,222,418	+		MIT1002_03777	0.35	+0.1
4,222,469	+		MIT1002_03777	0.42	-1.6
4,222,477	-		MIT1002_03777	0.43	-0.1
4,222,581	-		MIT1002_03777	0.57	+0.2
4,222,604	-		MIT1002_03777	0.60	+0.9
4,222,604	-		MIT1002_03777	0.60	-0.4
4,222,616	-		MIT1002_03777	0.61	-0.6
4,222,625	-		MIT1002_03777	0.63	+1.0
4,222,687	+		MIT1002_03777	0.71	+0.8
4,222,729	-		MIT1002_03777	0.76	+1.3
4,222,764	+		MIT1002_03777	0.81	-1.1
4,222,764	+		MIT1002_03777	0.81	-0.9
4,222,820	+		MIT1002_03777	0.89	+1.8
4,222,848	+				+0.8
4,222,963	+				+0.3
4,222,963	+				-0.4
4,222,973	-				+0.7
4,222,986	+				+0.7
4,222,994	-				+0.3
4,223,035	+				-0.5
4,223,041	+				+2.6
4,223,057	-				+0.2
4,223,333	+		MIT1002_03778	0.73	-1.7
4,223,387	-		MIT1002_03778	0.88	-0.6
4,223,507	-				-1.1
4,223,522	-				-2.0
4,223,571	+				+1.6
4,223,586	+				+0.1
4,223,586	+				+1.1
4,223,586	+				-0.3
4,223,586	+				+0.1
4,223,586	+				-0.2
4,223,594	-				+0.3
4,223,594	-				-1.3
4,223,594	-				+2.6
4,223,619	-				+1.7
4,223,620	+				-0.6
4,223,642	+				+0.2
4,223,679	+		MIT1002_03779	0.12	+0.3
4,223,679	+		MIT1002_03779	0.12	-0.1
4,223,686	-		MIT1002_03779	0.12	+0.3
4,223,857	+		MIT1002_03779	0.24	-0.7
4,224,089	+		MIT1002_03779	0.40	-2.2
4,224,206	-		MIT1002_03779	0.48	+1.5
4,224,248	+		MIT1002_03779	0.51	-1.8
4,224,248	+		MIT1002_03779	0.51	+1.3
4,224,248	+		MIT1002_03779	0.51	+0.9
4,224,268	-		MIT1002_03779	0.53	-0.8
4,224,275	+		MIT1002_03779	0.53	-0.7
4,224,275	+		MIT1002_03779	0.53	-0.7
4,224,283	-		MIT1002_03779	0.54	+0.3
4,224,283	-		MIT1002_03779	0.54	-0.8
4,224,300	-		MIT1002_03779	0.55	-1.6
4,224,305	-		MIT1002_03779	0.55	-0.2
4,224,324	+		MIT1002_03779	0.57	-0.2
4,224,351	-		MIT1002_03779	0.58	+0.8
4,224,372	-		MIT1002_03779	0.60	+0.0
4,224,420	-		MIT1002_03779	0.63	+0.1
4,224,426	+		MIT1002_03779	0.64	-3.1
4,224,426	+		MIT1002_03779	0.64	+0.7