Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03771

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 1
4,215,083	-		MIT1002_03770	0.30	-0.1
4,215,098	-		MIT1002_03770	0.32	+0.2
4,215,143	+		MIT1002_03770	0.36	-0.5
4,215,143	+		MIT1002_03770	0.36	-0.5
4,215,145	+		MIT1002_03770	0.37	+1.1
4,215,261	+		MIT1002_03770	0.49	-0.4
4,215,271	+		MIT1002_03770	0.50	-0.3
4,215,306	-		MIT1002_03770	0.53	-0.6
4,215,334	+		MIT1002_03770	0.56	-0.4
4,215,335	-		MIT1002_03770	0.56	+0.4
4,215,604	+		MIT1002_03770	0.84	+0.1
4,215,604	+		MIT1002_03770	0.84	-0.8
4,215,618	-		MIT1002_03770	0.85	-0.2
4,215,664	-				-0.7
4,215,680	+				+0.3
4,215,703	-				+0.1
4,215,762	-				-0.2
4,215,806	-				+1.0
4,215,806	-				-0.2
4,215,820	-				+0.1
4,215,847	+				+0.3
4,215,855	-				+0.2
4,215,855	-				-0.9
4,215,927	+				-0.5
4,215,929	-				-0.8
4,215,935	-				+2.1
4,215,935	-				-0.5
4,215,937	+				+0.1
4,215,954	-				+1.0
4,216,101	-				-3.0
4,216,187	-		MIT1002_03771	0.12	-0.1
4,216,224	+		MIT1002_03771	0.15	-2.3
4,216,271	+		MIT1002_03771	0.19	+1.5
4,216,271	+		MIT1002_03771	0.19	+0.7
4,216,271	+		MIT1002_03771	0.19	-1.1
4,216,271	+		MIT1002_03771	0.19	-0.3
4,216,271	+		MIT1002_03771	0.19	-0.2
4,216,271	+		MIT1002_03771	0.19	-3.1
4,216,279	-		MIT1002_03771	0.20	-0.9
4,216,281	+		MIT1002_03771	0.20	+1.3
4,216,281	+		MIT1002_03771	0.20	-1.3
4,216,322	+		MIT1002_03771	0.24	+0.8
4,216,396	-		MIT1002_03771	0.30	-3.4
4,216,440	-		MIT1002_03771	0.34	-0.7
4,216,516	-		MIT1002_03771	0.40	-1.4
4,216,519	+		MIT1002_03771	0.40	-1.7
4,216,519	+		MIT1002_03771	0.40	-0.5
4,216,552	-		MIT1002_03771	0.43	-2.1
4,216,670	+		MIT1002_03771	0.53	+0.3
4,216,701	+		MIT1002_03771	0.56	-2.4
4,216,748	+		MIT1002_03771	0.60	-2.1
4,216,761	-		MIT1002_03771	0.61	-1.2
4,216,984	+		MIT1002_03771	0.80	-2.4
4,217,023	+		MIT1002_03771	0.83	+0.4
4,217,026	-		MIT1002_03771	0.84	-1.0
4,217,031	-		MIT1002_03771	0.84	-2.3
4,217,065	+		MIT1002_03771	0.87	-0.1
4,217,079	+		MIT1002_03771	0.88	-2.4
4,217,108	+				+1.0
4,217,108	+				+1.7
4,217,131	-				+2.1
4,217,150	+				-1.7
4,217,191	-				+1.5
4,217,219	-				-0.9
4,217,237	-				-0.3
4,217,242	+				+0.2
4,217,250	-				-1.0
4,217,335	-				-1.3
4,217,345	+		MIT1002_03772	0.10	-1.1
4,217,361	+		MIT1002_03772	0.12	+2.8
4,217,487	+		MIT1002_03772	0.26	-0.2
4,217,487	+		MIT1002_03772	0.26	-0.8
4,217,489	+		MIT1002_03772	0.26	-0.7
4,217,499	+		MIT1002_03772	0.27	+1.6
4,217,507	-		MIT1002_03772	0.28	-0.3
4,217,801	+		MIT1002_03772	0.61	-0.8
4,217,801	+		MIT1002_03772	0.61	+0.8
4,217,828	+		MIT1002_03772	0.64	+1.0
4,217,841	+		MIT1002_03772	0.65	-1.0
4,217,843	+		MIT1002_03772	0.65	+0.5
4,217,849	-		MIT1002_03772	0.66	-1.0
4,218,043	-		MIT1002_03772	0.88	+0.0
4,218,055	+		MIT1002_03772	0.89	+0.2
4,218,071	-				+0.7
4,218,071	-				+0.3
4,218,119	+				-1.3
4,218,119	+				-1.8
4,218,120	-				+0.0
4,218,127	-				+0.5
4,218,127	-				+1.3
4,218,155	-				+0.2
4,218,201	-				+0.5