Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03567

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 1
3,991,463	+				-0.0
3,991,469	+		MIT1002_03566	0.10	+0.1
3,991,473	+		MIT1002_03566	0.11	+0.1
3,991,474	+		MIT1002_03566	0.11	-1.9
3,991,477	+		MIT1002_03566	0.11	-0.2
3,991,477	-		MIT1002_03566	0.11	+0.1
3,991,482	-		MIT1002_03566	0.12	-1.2
3,991,490	+		MIT1002_03566	0.13	+1.7
3,991,490	+		MIT1002_03566	0.13	-1.5
3,991,497	+		MIT1002_03566	0.14	-0.5
3,991,502	+		MIT1002_03566	0.15	-0.1
3,991,505	-		MIT1002_03566	0.15	-0.3
3,991,513	+		MIT1002_03566	0.16	-0.5
3,991,530	+		MIT1002_03566	0.18	-0.0
3,991,531	-		MIT1002_03566	0.18	-0.2
3,991,531	-		MIT1002_03566	0.18	-0.5
3,991,557	+		MIT1002_03566	0.21	-1.7
3,991,557	+		MIT1002_03566	0.21	+2.7
3,991,566	+		MIT1002_03566	0.23	+0.3
3,991,566	+		MIT1002_03566	0.23	-1.0
3,991,566	+		MIT1002_03566	0.23	-0.2
3,991,566	+		MIT1002_03566	0.23	+0.1
3,991,566	+		MIT1002_03566	0.23	+0.2
3,991,566	+		MIT1002_03566	0.23	+0.2
3,991,566	+		MIT1002_03566	0.23	-1.1
3,991,566	+		MIT1002_03566	0.23	-1.1
3,991,566	+		MIT1002_03566	0.23	-0.1
3,991,566	+		MIT1002_03566	0.23	-0.3
3,991,566	+		MIT1002_03566	0.23	-0.1
3,991,566	+		MIT1002_03566	0.23	+0.7
3,991,566	+		MIT1002_03566	0.23	-0.1
3,991,566	+		MIT1002_03566	0.23	+0.0
3,991,566	+		MIT1002_03566	0.23	+0.4
3,991,566	+		MIT1002_03566	0.23	-0.2
3,991,566	+		MIT1002_03566	0.23	+0.3
3,991,566	+		MIT1002_03566	0.23	+2.1
3,991,566	+		MIT1002_03566	0.23	+0.3
3,991,566	-		MIT1002_03566	0.23	+0.0
3,991,567	+		MIT1002_03566	0.23	+0.5
3,991,574	-		MIT1002_03566	0.24	-0.3
3,991,574	-		MIT1002_03566	0.24	+1.2
3,991,574	-		MIT1002_03566	0.24	+1.4
3,991,574	-		MIT1002_03566	0.24	-0.1
3,991,574	-		MIT1002_03566	0.24	+0.1
3,991,574	-		MIT1002_03566	0.24	+0.0
3,991,574	-		MIT1002_03566	0.24	+0.6
3,991,574	-		MIT1002_03566	0.24	+0.4
3,991,574	-		MIT1002_03566	0.24	-2.8
3,991,574	-		MIT1002_03566	0.24	+0.0
3,991,574	-		MIT1002_03566	0.24	+1.5
3,991,574	-		MIT1002_03566	0.24	-1.4
3,991,574	-		MIT1002_03566	0.24	+1.5
3,991,574	-		MIT1002_03566	0.24	-0.7
3,991,580	+		MIT1002_03566	0.24	-0.2
3,991,593	+		MIT1002_03566	0.26	+0.1
3,991,620	+		MIT1002_03566	0.29	-1.1
3,991,630	+		MIT1002_03566	0.31	-0.5
3,991,631	-		MIT1002_03566	0.31	+1.5
3,991,637	+		MIT1002_03566	0.31	-2.3
3,991,640	+		MIT1002_03566	0.32	-0.2
3,991,640	+		MIT1002_03566	0.32	-2.3
3,991,655	+		MIT1002_03566	0.34	+0.5
3,991,655	+		MIT1002_03566	0.34	+0.1
3,991,655	+		MIT1002_03566	0.34	-0.7
3,991,655	+		MIT1002_03566	0.34	+0.6
3,991,663	-		MIT1002_03566	0.35	+0.4
3,991,663	-		MIT1002_03566	0.35	+0.1
3,991,663	-		MIT1002_03566	0.35	-0.6
3,991,663	-		MIT1002_03566	0.35	-0.6
3,991,663	-		MIT1002_03566	0.35	+0.3
3,991,663	-		MIT1002_03566	0.35	+0.3
3,991,665	-		MIT1002_03566	0.35	-0.1
3,991,687	+		MIT1002_03566	0.38	-0.1
3,991,689	-		MIT1002_03566	0.38	-0.6
3,991,715	+		MIT1002_03566	0.41	+0.1
3,991,716	+		MIT1002_03566	0.41	+0.3
3,991,716	+		MIT1002_03566	0.41	+1.0
3,991,725	-		MIT1002_03566	0.42	-1.7
3,991,814	-		MIT1002_03566	0.54	-0.1
3,991,816	+		MIT1002_03566	0.54	+0.3
3,991,824	-		MIT1002_03566	0.55	-0.2
3,991,844	+		MIT1002_03566	0.57	+0.0
3,991,844	+		MIT1002_03566	0.57	+0.4
3,991,852	-		MIT1002_03566	0.58	+0.2
3,991,911	+		MIT1002_03566	0.66	+1.2
3,991,911	+		MIT1002_03566	0.66	-1.1
3,991,957	+		MIT1002_03566	0.71	+0.3
3,991,968	+		MIT1002_03566	0.73	+0.4
3,991,969	+		MIT1002_03566	0.73	-2.9
3,991,969	+		MIT1002_03566	0.73	-0.4
3,991,975	-		MIT1002_03566	0.74	+0.1
3,991,975	-		MIT1002_03566	0.74	-1.1
3,991,977	-		MIT1002_03566	0.74	+0.5
3,992,025	-		MIT1002_03566	0.80	+1.3
3,992,032	-		MIT1002_03566	0.81	+1.3
3,992,039	+		MIT1002_03566	0.82	-0.8
3,992,051	+		MIT1002_03566	0.83	-0.4
3,992,054	+		MIT1002_03566	0.84	+0.4
3,992,055	-		MIT1002_03566	0.84	-1.1
3,992,056	-		MIT1002_03566	0.84	-1.5
3,992,059	-		MIT1002_03566	0.84	-2.4
3,992,061	-		MIT1002_03566	0.84	+1.5
3,992,077	+		MIT1002_03566	0.86	-0.1
3,992,103	+		MIT1002_03566	0.90	+1.1
3,992,108	+				+0.1
3,992,139	+				+0.2
3,992,139	+				-0.8
3,992,139	+				-2.4
3,992,139	+				-0.7
3,992,139	+				-0.2
3,992,139	+				-0.0
3,992,139	+				+0.8
3,992,139	+				-1.1
3,992,139	+				+0.3
3,992,139	+				-0.9
3,992,139	+				-0.1
3,992,147	-				+1.8
3,992,147	-				-1.2
3,992,147	-				+0.2
3,992,147	-				-0.3
3,992,147	-				+0.3
3,992,147	-				+0.0
3,992,147	-				+0.5
3,992,147	-				-0.5
3,992,147	-				-1.5
3,992,147	-				+0.1
3,992,147	-				+0.0
3,992,147	-				+0.9
3,992,147	-				-0.0
3,992,147	-				-0.0
3,992,147	-				-1.1
3,992,147	-				-0.3
3,992,147	-				+0.0
3,992,147	-				-0.8
3,992,147	-				-1.6
3,992,147	-				+0.5
3,992,147	-				-0.0
3,992,147	-				-0.7
3,992,147	-				-0.3
3,992,158	+				+0.1
3,992,164	-				+1.5
3,992,238	-				+0.7
3,992,266	+				+1.3
3,992,276	+				+1.9
3,992,276	+				+0.4
3,992,276	+				-1.2
3,992,276	+				-0.7
3,992,276	+				+0.3
3,992,276	+				+0.4
3,992,276	+				-1.6
3,992,276	+				+0.3
3,992,276	+				+1.0
3,992,276	+				+0.8
3,992,276	+				+0.6
3,992,276	+				-0.7
3,992,276	+				+2.2
3,992,276	+				-1.1
3,992,276	+				+0.0
3,992,284	-				-1.1
3,992,284	-				+1.4
3,992,284	-				+0.1
3,992,284	-				-1.5
3,992,284	-				+0.2
3,992,284	-				-1.2
3,992,284	-				+2.9
3,992,284	-				-0.8
3,992,284	-				+0.0
3,992,284	-				-0.7
3,992,284	-				-0.4
3,992,286	+				-0.2
3,992,296	+				-0.9
3,992,317	+				-0.4
3,992,325	-				-2.3
3,992,329	+				+0.3
3,992,329	+				-3.7
3,992,329	+				+0.5
3,992,329	+				-0.3
3,992,336	-				-0.1
3,992,337	-				-0.7
3,992,407	+				-0.1
3,992,432	+				+2.0
3,992,437	-				-0.1
3,992,457	+				-0.2
3,992,511	+				-2.3
3,992,511	+				+0.3
3,992,511	+				-1.9
3,992,519	-				-1.1
3,992,634	+				-2.5
3,992,634	+				-2.5
3,992,642	-		MIT1002_03567	0.10	-1.3
3,992,703	+		MIT1002_03567	0.13	-0.7
3,992,761	+		MIT1002_03567	0.17	+1.0
3,993,017	+		MIT1002_03567	0.31	-2.1
3,993,022	+		MIT1002_03567	0.31	-1.4
3,993,030	-		MIT1002_03567	0.32	-2.2
3,993,073	+		MIT1002_03567	0.34	-1.6
3,993,127	-		MIT1002_03567	0.37	+0.8
3,993,149	+		MIT1002_03567	0.38	-0.7
3,993,191	-		MIT1002_03567	0.41	-0.4
3,993,191	-		MIT1002_03567	0.41	+3.4
3,993,191	-		MIT1002_03567	0.41	-2.6
3,993,232	+		MIT1002_03567	0.43	-2.5
3,993,282	-		MIT1002_03567	0.46	-0.3
3,993,282	-		MIT1002_03567	0.46	-2.4
3,993,338	-		MIT1002_03567	0.49	-1.3
3,993,340	+		MIT1002_03567	0.49	+0.9
3,993,340	+		MIT1002_03567	0.49	-0.2
3,993,428	+		MIT1002_03567	0.54	+0.4
3,993,436	-		MIT1002_03567	0.54	-3.1
3,993,436	-		MIT1002_03567	0.54	-3.1
3,993,436	-		MIT1002_03567	0.54	-2.9
3,993,443	-		MIT1002_03567	0.55	-2.6
3,993,453	+		MIT1002_03567	0.55	-2.3
3,993,453	-		MIT1002_03567	0.55	-1.1
3,993,479	-		MIT1002_03567	0.57	-1.5
3,993,481	+		MIT1002_03567	0.57	-2.4
3,993,775	+		MIT1002_03567	0.73	-0.1
3,993,775	+		MIT1002_03567	0.73	-1.6
3,993,783	-		MIT1002_03567	0.74	+0.6
3,993,843	+		MIT1002_03567	0.77	-0.2
3,993,851	-		MIT1002_03567	0.77	-1.1
3,993,851	-		MIT1002_03567	0.77	-1.9
3,993,851	-		MIT1002_03567	0.77	-0.7
3,994,012	-		MIT1002_03567	0.86	-2.7
3,994,014	-		MIT1002_03567	0.86	-1.1
3,994,027	+		MIT1002_03567	0.87	-1.3
3,994,101	+				-1.4
3,994,138	-				-0.6
3,994,253	+				+1.1
3,994,316	+				-1.4
3,994,346	+				-1.1
3,994,459	-		MIT1002_03568	0.15	-3.3
3,994,641	+		MIT1002_03568	0.29	+0.6
3,994,650	-		MIT1002_03568	0.30	-1.7
3,994,661	+		MIT1002_03568	0.31	-0.7
3,994,667	-		MIT1002_03568	0.31	-1.1
3,994,667	-		MIT1002_03568	0.31	-0.8
3,994,669	-		MIT1002_03568	0.31	-3.5
3,994,718	+		MIT1002_03568	0.35	+1.4
3,994,719	+		MIT1002_03568	0.36	-3.1
3,994,727	-		MIT1002_03568	0.36	+1.3
3,994,737	-		MIT1002_03568	0.37	-0.3
3,994,753	+		MIT1002_03568	0.38	-1.1
3,994,902	+		MIT1002_03568	0.50	-1.1
3,994,943	-		MIT1002_03568	0.53	-2.9
3,994,945	+		MIT1002_03568	0.54	-1.9
3,995,025	-		MIT1002_03568	0.60	+0.8
3,995,047	-		MIT1002_03568	0.62	+1.3
3,995,047	-		MIT1002_03568	0.62	+0.3
3,995,108	+		MIT1002_03568	0.67	-1.2
3,995,181	+		MIT1002_03568	0.73	-3.2
3,995,204	-		MIT1002_03568	0.74	-0.4
3,995,243	-		MIT1002_03568	0.78	-1.7
3,995,243	-		MIT1002_03568	0.78	-3.5