Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03399

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 1
3,802,126	+				-0.3
3,802,225	+				-0.8
3,802,225	+				-0.2
3,802,233	-				+0.9
3,802,235	+				+0.5
3,802,235	+				+0.8
3,802,235	+				+0.2
3,802,243	-				+0.1
3,802,243	-				-0.5
3,802,243	-				-1.1
3,802,288	+				-0.9
3,802,507	-				+0.6
3,802,550	-		MIT1002_03398	0.10	-0.0
3,802,615	-		MIT1002_03398	0.25	-1.3
3,802,752	-		MIT1002_03398	0.55	-0.0
3,802,830	-		MIT1002_03398	0.72	+0.1
3,802,840	-		MIT1002_03398	0.74	-0.9
3,802,913	+				-0.7
3,802,921	-				+0.6
3,802,944	-				-0.1
3,802,944	-				+0.6
3,802,955	+				-2.3
3,803,112	+				-0.2
3,803,172	+		MIT1002_03399	0.15	+0.3
3,803,175	-		MIT1002_03399	0.16	+0.2
3,803,180	-		MIT1002_03399	0.16	+0.7
3,803,216	-		MIT1002_03399	0.19	-0.3
3,803,243	+		MIT1002_03399	0.22	-0.5
3,803,265	-		MIT1002_03399	0.24	-0.1
3,803,348	+		MIT1002_03399	0.32	+0.0
3,803,348	+		MIT1002_03399	0.32	+0.0
3,803,348	+		MIT1002_03399	0.32	+1.1
3,803,348	+		MIT1002_03399	0.32	+1.8
3,803,565	+		MIT1002_03399	0.52	+1.9
3,803,565	+		MIT1002_03399	0.52	+0.4
3,803,573	-		MIT1002_03399	0.53	-0.3
3,803,598	+		MIT1002_03399	0.55	-0.3
3,803,598	+		MIT1002_03399	0.55	+0.3
3,803,598	+		MIT1002_03399	0.55	-0.5
3,803,598	+		MIT1002_03399	0.55	+1.5
3,803,598	+		MIT1002_03399	0.55	+0.4
3,803,598	+		MIT1002_03399	0.55	+0.3
3,803,598	+		MIT1002_03399	0.55	+1.7
3,803,598	+		MIT1002_03399	0.55	-1.9
3,803,606	-		MIT1002_03399	0.56	+0.3
3,803,606	-		MIT1002_03399	0.56	-0.3
3,803,606	-		MIT1002_03399	0.56	+0.2
3,803,606	-		MIT1002_03399	0.56	-0.1
3,803,606	-		MIT1002_03399	0.56	-0.1
3,803,606	-		MIT1002_03399	0.56	-0.6
3,803,606	-		MIT1002_03399	0.56	-0.0
3,803,606	-		MIT1002_03399	0.56	-0.5
3,803,606	-		MIT1002_03399	0.56	+1.1
3,803,606	-		MIT1002_03399	0.56	-0.5
3,803,633	+		MIT1002_03399	0.58	+0.0
3,803,650	+		MIT1002_03399	0.60	+1.2
3,803,687	+		MIT1002_03399	0.63	-0.1
3,803,697	+		MIT1002_03399	0.64	+0.2
3,803,803	+		MIT1002_03399	0.74	+0.8
3,803,905	-		MIT1002_03399	0.83	+1.3
3,803,988	+				+0.7
3,804,027	+				-2.6
3,804,035	-				-0.5
3,804,041	-				-2.2
3,804,155	-				-0.6
3,804,194	-				-3.4
3,804,223	+				-0.3
3,804,223	+				-0.7
3,804,231	-				-0.3
3,804,280	+		MIT1002_03400	0.11	-0.0
3,804,308	+		MIT1002_03400	0.16	+0.2
3,804,337	+		MIT1002_03400	0.22	-0.6
3,804,345	-		MIT1002_03400	0.24	-0.8
3,804,346	+		MIT1002_03400	0.24	+0.6
3,804,354	-		MIT1002_03400	0.25	-0.0
3,804,518	+		MIT1002_03400	0.58	-1.9
3,804,563	+		MIT1002_03400	0.67	+0.7
3,804,624	+		MIT1002_03400	0.79	+0.4
3,804,632	-		MIT1002_03400	0.81	+0.8
3,804,632	-		MIT1002_03400	0.81	+1.6
3,804,632	-		MIT1002_03400	0.81	-0.2
3,804,637	-		MIT1002_03400	0.82	+1.2
3,804,639	-		MIT1002_03400	0.82	+0.9
3,804,659	-		MIT1002_03400	0.86	-2.9
3,804,702	-				+0.6
3,804,734	-				+0.2
3,804,816	+				+0.0
3,804,825	-				+0.7
3,804,830	-				-0.2
3,804,898	+				-0.3
3,804,898	+				-0.3
3,804,919	+				+0.3
3,804,920	-				+0.9
3,804,920	-				+0.4
3,804,947	-				-0.2
3,804,947	-				-0.7
3,804,968	+				-0.5