Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03184

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 1
3,548,129	-				-0.5
3,548,129	-				-0.9
3,548,222	+				+1.2
3,548,300	-				-0.4
3,548,361	-				-0.7
3,548,361	-				+2.3
3,548,408	+				-2.9
3,548,416	-		MIT1002_03184	0.10	-1.8
3,548,470	-		MIT1002_03184	0.19	-2.5
3,548,533	-		MIT1002_03184	0.29	-1.9
3,548,543	+		MIT1002_03184	0.31	-2.8
3,548,560	+		MIT1002_03184	0.33	+0.5
3,548,593	+		MIT1002_03184	0.39	-1.1
3,548,641	+		MIT1002_03184	0.46	-0.2
3,548,641	+		MIT1002_03184	0.46	-0.3
3,548,649	-		MIT1002_03184	0.48	-0.9
3,548,696	+		MIT1002_03184	0.55	-0.6
3,548,704	-		MIT1002_03184	0.56	-0.7
3,548,775	-		MIT1002_03184	0.68	-0.7
3,548,841	+		MIT1002_03184	0.78	-3.2
3,548,853	+		MIT1002_03184	0.80	+1.6
3,548,906	+		MIT1002_03184	0.89	-0.6
3,548,907	-		MIT1002_03184	0.89	-1.5
3,548,937	+				+1.1
3,548,937	+				+0.7
3,548,937	+				-1.3
3,548,937	+				-2.9
3,548,945	-				-0.4
3,548,945	-				-1.6
3,548,945	-				-0.9
3,548,945	-				+0.4
3,548,945	-				+0.0
3,548,945	-				+0.1
3,548,945	-				-1.5
3,548,945	-				-0.1
3,548,945	-				-0.4
3,549,004	+				-3.0
3,549,015	-				-2.7
3,549,015	-				-0.5
3,549,015	-				+0.6
3,549,015	-				-0.8
3,549,015	-				+0.8
3,549,049	+				-0.6
3,549,105	+				+0.7
3,549,147	+				-1.4
3,549,164	+				-1.6
3,549,164	+				+0.7
3,549,243	+		MIT1002_03185	0.12	-1.0
3,549,386	+		MIT1002_03185	0.26	-0.3
3,549,393	-		MIT1002_03185	0.26	-1.6
3,549,418	+		MIT1002_03185	0.29	-0.5
3,549,418	+		MIT1002_03185	0.29	-0.5
3,549,426	-		MIT1002_03185	0.29	-1.0
3,549,494	+		MIT1002_03185	0.36	-0.8
3,549,494	+		MIT1002_03185	0.36	-0.8
3,549,494	+		MIT1002_03185	0.36	+0.1
3,549,502	-		MIT1002_03185	0.36	-2.3
3,549,502	-		MIT1002_03185	0.36	-1.1
3,549,502	-		MIT1002_03185	0.36	-1.6
3,549,565	+		MIT1002_03185	0.42	-0.6
3,549,611	-		MIT1002_03185	0.46	-0.4
3,549,625	+		MIT1002_03185	0.48	-1.2
3,549,625	+		MIT1002_03185	0.48	-0.3
3,549,633	-		MIT1002_03185	0.48	-0.3
3,549,633	-		MIT1002_03185	0.48	-1.2
3,549,633	-		MIT1002_03185	0.48	-2.7
3,549,635	+		MIT1002_03185	0.49	-0.8
3,549,774	+		MIT1002_03185	0.61	+0.1
3,549,791	+		MIT1002_03185	0.63	-0.9
3,549,793	+		MIT1002_03185	0.63	-1.7
3,549,796	-		MIT1002_03185	0.63	+0.0
3,549,839	+		MIT1002_03185	0.67	-0.0
3,549,839	+		MIT1002_03185	0.67	+0.4
3,549,845	-		MIT1002_03185	0.68	-0.8
3,549,888	-		MIT1002_03185	0.72	-0.9