Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03128

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 1
3,480,837	+				-0.2
3,480,837	+				-0.1
3,480,844	+				+0.4
3,480,877	+				+1.2
3,480,901	-				-0.1
3,480,901	-				-2.0
3,481,022	-				+0.3
3,481,202	+		MIT1002_03127	0.17	+0.7
3,481,233	-		MIT1002_03127	0.51	-2.5
3,481,358	-				+0.5
3,481,368	-				-0.2
3,481,380	+				-3.5
3,481,417	-				+1.7
3,481,428	+				+1.0
3,481,453	-				+1.3
3,481,655	+		MIT1002_03128	0.14	+0.1
3,481,655	+		MIT1002_03128	0.14	-0.3
3,481,760	+		MIT1002_03128	0.30	-2.5
3,481,768	-		MIT1002_03128	0.31	-1.5
3,481,789	-		MIT1002_03128	0.34	-0.3
3,481,794	-		MIT1002_03128	0.35	-2.0
3,481,820	-		MIT1002_03128	0.39	-2.1
3,481,831	+		MIT1002_03128	0.40	-0.7
3,481,831	+		MIT1002_03128	0.40	-0.4
3,481,831	+		MIT1002_03128	0.40	-0.0
3,481,831	+		MIT1002_03128	0.40	-0.1
3,481,839	+		MIT1002_03128	0.41	-1.3
3,481,839	+		MIT1002_03128	0.41	-1.6
3,481,839	-		MIT1002_03128	0.41	-1.3
3,481,839	-		MIT1002_03128	0.41	-1.1
3,481,847	-		MIT1002_03128	0.43	-1.6
3,481,847	-		MIT1002_03128	0.43	-1.3
3,481,847	-		MIT1002_03128	0.43	-1.3
3,482,067	+		MIT1002_03128	0.76	-0.6
3,482,112	+		MIT1002_03128	0.83	-0.5
3,482,118	-		MIT1002_03128	0.84	-1.1
3,482,215	+				+0.4
3,482,219	-				-0.2
3,482,221	+				+0.7
3,482,236	+				+1.4
3,482,244	-				-1.3
3,482,371	-				-1.1
3,482,468	-		MIT1002_03129	0.20	+0.4
3,482,500	-		MIT1002_03129	0.24	-0.8
3,482,545	-		MIT1002_03129	0.29	-1.0
3,482,555	-		MIT1002_03129	0.30	-0.7
3,482,555	-		MIT1002_03129	0.30	-0.6
3,482,559	+		MIT1002_03129	0.30	-0.3
3,482,567	-		MIT1002_03129	0.31	-3.9
3,482,654	+		MIT1002_03129	0.41	+0.1
3,482,699	+		MIT1002_03129	0.46	-0.7
3,482,725	-		MIT1002_03129	0.49	-0.8
3,482,775	+		MIT1002_03129	0.55	-1.9
3,482,783	-		MIT1002_03129	0.56	+0.7
3,482,783	-		MIT1002_03129	0.56	-1.1
3,482,783	-		MIT1002_03129	0.56	-1.1
3,482,787	+		MIT1002_03129	0.57	-2.2
3,482,812	-		MIT1002_03129	0.59	-0.8
3,482,869	-		MIT1002_03129	0.66	+0.4
3,482,901	-		MIT1002_03129	0.70	-0.6
3,482,916	-		MIT1002_03129	0.71	-0.7
3,482,984	-		MIT1002_03129	0.79	+0.0
3,483,042	+		MIT1002_03129	0.86	-0.2
3,483,156	+				-1.3
3,483,217	-				-1.8
3,483,225	+				+1.0