Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03110

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 1
3,463,994	+		MIT1002_03109	0.57	-4.1
3,464,002	-		MIT1002_03109	0.58	-3.2
3,464,017	+		MIT1002_03109	0.59	-2.9
3,464,019	+		MIT1002_03109	0.59	+0.3
3,464,026	+		MIT1002_03109	0.60	-2.9
3,464,027	-		MIT1002_03109	0.60	-0.7
3,464,200	-		MIT1002_03109	0.74	-0.1
3,464,334	+		MIT1002_03109	0.86	+0.3
3,464,342	-		MIT1002_03109	0.86	+0.1
3,464,342	-		MIT1002_03109	0.86	-1.9
3,464,396	+				-3.0
3,464,414	-				-2.7
3,464,581	-				+0.6
3,464,608	-				+0.1
3,464,672	+				-3.4
3,464,764	-				-0.6
3,464,774	-				-3.2
3,464,864	-		MIT1002_03110	0.16	-1.1
3,464,948	+		MIT1002_03110	0.23	-1.0
3,465,102	-		MIT1002_03110	0.37	-2.5
3,465,144	+		MIT1002_03110	0.41	-0.9
3,465,145	+		MIT1002_03110	0.41	-1.7
3,465,150	-		MIT1002_03110	0.41	-1.7
3,465,209	-		MIT1002_03110	0.47	-0.7
3,465,227	+		MIT1002_03110	0.48	-0.1
3,465,227	+		MIT1002_03110	0.48	-1.3
3,465,235	-		MIT1002_03110	0.49	-1.1
3,465,237	-		MIT1002_03110	0.49	-1.1
3,465,300	+		MIT1002_03110	0.55	-1.1
3,465,306	-		MIT1002_03110	0.55	-2.4
3,465,308	+		MIT1002_03110	0.55	-1.6
3,465,325	+		MIT1002_03110	0.57	-2.1
3,465,325	-		MIT1002_03110	0.57	+0.7
3,465,336	+		MIT1002_03110	0.58	+0.5
3,465,447	-		MIT1002_03110	0.68	-1.3
3,465,475	+		MIT1002_03110	0.70	-1.1
3,465,549	+		MIT1002_03110	0.77	-3.9
3,465,619	+		MIT1002_03110	0.83	+1.1
3,465,650	-		MIT1002_03110	0.85	-0.6
3,465,681	+		MIT1002_03110	0.88	+1.3
3,465,689	-		MIT1002_03110	0.89	-2.6
3,465,716	+				-0.7
3,465,716	+				-2.6
3,465,724	-				-3.2
3,465,967	-				+3.1
3,466,043	+		MIT1002_03111	0.18	-0.2
3,466,051	-		MIT1002_03111	0.19	-0.2
3,466,051	-		MIT1002_03111	0.19	-1.7
3,466,051	-		MIT1002_03111	0.19	-0.3
3,466,053	+		MIT1002_03111	0.19	+0.4
3,466,056	-		MIT1002_03111	0.20	+0.8
3,466,058	+		MIT1002_03111	0.20	-1.8
3,466,122	-		MIT1002_03111	0.28	+0.0
3,466,185	-		MIT1002_03111	0.36	+0.8
3,466,276	+		MIT1002_03111	0.48	-1.1
3,466,290	+		MIT1002_03111	0.50	-0.8
3,466,366	+		MIT1002_03111	0.60	-0.7
3,466,379	-		MIT1002_03111	0.62	-0.1
3,466,455	+		MIT1002_03111	0.72	-4.4
3,466,455	+		MIT1002_03111	0.72	+0.4
3,466,455	+		MIT1002_03111	0.72	+0.1
3,466,463	-		MIT1002_03111	0.73	-1.0
3,466,483	+		MIT1002_03111	0.75	+0.0
3,466,563	+		MIT1002_03111	0.86	+0.4
3,466,703	+				+0.1
3,466,721	-				+0.7
3,466,746	+				+1.5
3,466,749	-				+0.1
3,466,754	-				-1.3
3,466,754	-				-0.2
3,466,754	-				+0.6
3,466,758	+				-0.3
3,466,764	-				+0.3
3,466,766	-				+0.7
3,466,790	-		MIT1002_03112	0.12	-0.9
3,466,802	+		MIT1002_03112	0.17	-2.0
3,466,810	-		MIT1002_03112	0.20	+0.5