Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02785

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 1
3,088,492	+				+0.0
3,088,500	-				-0.2
3,088,549	-				-0.7
3,088,636	-				+0.6
3,088,685	+				-2.0
3,088,685	-				+1.4
3,088,718	+				+0.5
3,088,726	-				-2.0
3,088,736	-				-2.9
3,088,741	-				-1.1
3,088,767	+				+0.2
3,088,775	-				-2.0
3,088,800	+		MIT1002_02785	0.12	-2.6
3,088,805	+		MIT1002_02785	0.12	-1.1
3,088,808	-		MIT1002_02785	0.12	-2.1
3,088,810	+		MIT1002_02785	0.12	-1.7
3,088,905	+		MIT1002_02785	0.20	-1.1
3,088,905	+		MIT1002_02785	0.20	+1.9
3,088,913	-		MIT1002_02785	0.21	-2.7
3,088,924	+		MIT1002_02785	0.21	-3.0
3,088,931	+		MIT1002_02785	0.22	-2.1
3,088,938	+		MIT1002_02785	0.23	-1.1
3,088,938	+		MIT1002_02785	0.23	+0.0
3,088,946	-		MIT1002_02785	0.23	-4.4
3,089,040	+		MIT1002_02785	0.31	-0.8
3,089,070	-		MIT1002_02785	0.33	-1.1
3,089,123	-		MIT1002_02785	0.37	-1.1
3,089,125	+		MIT1002_02785	0.37	+2.5
3,089,133	+		MIT1002_02785	0.38	+0.9
3,089,178	+		MIT1002_02785	0.42	-1.7
3,089,246	-		MIT1002_02785	0.47	-3.3
3,089,273	-		MIT1002_02785	0.49	+0.5
3,089,299	-		MIT1002_02785	0.51	-1.3
3,089,300	+		MIT1002_02785	0.51	-0.2
3,089,308	+		MIT1002_02785	0.52	-3.0
3,089,354	+		MIT1002_02785	0.56	-0.8
3,089,354	+		MIT1002_02785	0.56	-0.7
3,089,371	+		MIT1002_02785	0.57	-1.1
3,089,457	-		MIT1002_02785	0.64	+0.9
3,089,474	+		MIT1002_02785	0.65	-0.2
3,089,496	+		MIT1002_02785	0.67	+0.5
3,089,557	+		MIT1002_02785	0.72	-2.0
3,089,573	+		MIT1002_02785	0.73	-2.3
3,089,581	-		MIT1002_02785	0.74	-0.8
3,089,674	+		MIT1002_02785	0.81	-2.2
3,089,674	+		MIT1002_02785	0.81	-0.8
3,089,674	+		MIT1002_02785	0.81	-2.7
3,089,676	-		MIT1002_02785	0.81	+1.2
3,089,682	-		MIT1002_02785	0.82	-1.2
3,089,802	+				+1.2
3,089,838	-				-2.2
3,089,840	+				+1.4
3,089,848	-				-2.5
3,089,848	-				-1.3
3,089,932	+				-3.0
3,089,940	-				+0.1
3,089,950	-				+0.1
3,089,951	-				-1.1
3,089,951	-				-2.0
3,090,050	-		MIT1002_02786	0.15	-0.7
3,090,246	+		MIT1002_02786	0.46	-2.4
3,090,254	-		MIT1002_02786	0.48	-0.8
3,090,254	-		MIT1002_02786	0.48	-3.9
3,090,254	-		MIT1002_02786	0.48	-0.6
3,090,254	-		MIT1002_02786	0.48	+0.4
3,090,323	+		MIT1002_02786	0.59	-1.0
3,090,328	+		MIT1002_02786	0.60	+0.5
3,090,383	-		MIT1002_02786	0.68	+1.4
3,090,383	-		MIT1002_02786	0.68	-0.6
3,090,385	-		MIT1002_02786	0.69	-2.5
3,090,468	-		MIT1002_02786	0.82	-0.0
3,090,468	-		MIT1002_02786	0.82	-0.8
3,090,513	+		MIT1002_02786	0.89	-0.2
3,090,521	-				-0.7
3,090,580	-				+1.3
3,090,580	-				+0.4