Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02655

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 1
2,953,372	-		MIT1002_02655	0.49	-1.5
2,953,573	-		MIT1002_02655	0.86	-0.7
2,953,573	-		MIT1002_02655	0.86	-0.7
2,953,681	-		MIT1002_02656	0.11	-2.0
2,953,900	-				-0.0
2,954,170	+		MIT1002_02657	0.30	+0.3
2,954,170	+		MIT1002_02657	0.30	+0.6
2,954,178	-		MIT1002_02657	0.31	-1.0
2,954,206	-		MIT1002_02657	0.34	-0.1
2,954,214	-		MIT1002_02657	0.35	-0.5
2,954,272	+		MIT1002_02657	0.43	-0.3
2,954,304	+		MIT1002_02657	0.47	-1.4
2,954,345	+		MIT1002_02657	0.52	-2.2
2,954,345	+		MIT1002_02657	0.52	+0.4
2,954,413	+		MIT1002_02657	0.61	-0.1
2,954,413	+		MIT1002_02657	0.61	-3.5
2,954,413	+		MIT1002_02657	0.61	+0.8
2,954,413	+		MIT1002_02657	0.61	-0.8
2,954,421	-		MIT1002_02657	0.62	+1.8
2,954,421	-		MIT1002_02657	0.62	-0.5
2,954,487	-		MIT1002_02657	0.71	-0.3
2,954,492	+		MIT1002_02657	0.72	+0.8
2,954,502	+		MIT1002_02657	0.73	-1.0
2,954,510	-		MIT1002_02657	0.74	+0.7
2,954,510	-		MIT1002_02657	0.74	+1.6
2,954,533	-		MIT1002_02657	0.77	-1.1
2,954,571	+		MIT1002_02657	0.82	-0.9