Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02583

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 1
2,883,650	+		MIT1002_02581	0.22	-0.1
2,883,650	+		MIT1002_02581	0.22	-1.2
2,883,650	+		MIT1002_02581	0.22	+1.9
2,883,650	+		MIT1002_02581	0.22	+1.7
2,883,674	+		MIT1002_02581	0.27	-0.8
2,883,784	+		MIT1002_02581	0.48	-2.3
2,883,822	+		MIT1002_02581	0.55	-2.1
2,883,910	+		MIT1002_02581	0.72	-0.0
2,884,001	+		MIT1002_02581	0.89	+1.2
2,884,009	+				+0.4
2,884,107	-				-0.0
2,884,117	+		MIT1002_02582	0.11	+0.2
2,884,155	-		MIT1002_02582	0.18	-2.4
2,884,175	-		MIT1002_02582	0.21	-4.0
2,884,187	+		MIT1002_02582	0.24	+1.6
2,884,219	-		MIT1002_02582	0.29	+0.5
2,884,235	+		MIT1002_02582	0.32	+0.4
2,884,242	-		MIT1002_02582	0.34	-3.1
2,884,242	-		MIT1002_02582	0.34	+0.9
2,884,284	+		MIT1002_02582	0.41	-0.2
2,884,293	-		MIT1002_02582	0.43	+0.3
2,884,331	-		MIT1002_02582	0.50	-1.9
2,884,331	-		MIT1002_02582	0.50	-0.1
2,884,331	-		MIT1002_02582	0.50	-0.7
2,884,387	+		MIT1002_02582	0.60	+1.3
2,884,395	-		MIT1002_02582	0.61	+0.3
2,884,395	-		MIT1002_02582	0.61	-0.1
2,884,395	-		MIT1002_02582	0.61	-0.2
2,884,407	+		MIT1002_02582	0.63	+1.0
2,884,449	-		MIT1002_02582	0.71	-2.3
2,884,471	+		MIT1002_02582	0.75	-0.2
2,884,480	+		MIT1002_02582	0.76	-0.0
2,884,488	-		MIT1002_02582	0.78	-0.7
2,884,488	-		MIT1002_02582	0.78	-1.7
2,884,488	-		MIT1002_02582	0.78	-1.0
2,884,521	-		MIT1002_02582	0.84	+1.7
2,884,542	-		MIT1002_02582	0.88	-2.7
2,884,578	+				-0.8
2,884,586	-				-0.2
2,884,636	-				+0.0
2,884,723	-		MIT1002_02583	0.20	-2.9
2,884,751	-		MIT1002_02583	0.25	-1.4
2,884,751	-		MIT1002_02583	0.25	-0.2
2,884,997	+		MIT1002_02583	0.75	-0.8
2,885,005	-		MIT1002_02583	0.77	-0.2
2,885,053	-		MIT1002_02583	0.86	-1.7
2,885,290	+		MIT1002_02584	0.26	+0.2
2,885,398	+		MIT1002_02584	0.42	+0.4
2,885,464	-		MIT1002_02584	0.52	-0.4
2,885,481	-		MIT1002_02584	0.54	-0.4
2,885,499	-		MIT1002_02584	0.57	+0.1
2,885,557	+		MIT1002_02584	0.66	+0.0
2,885,557	+		MIT1002_02584	0.66	+1.0
2,885,575	+		MIT1002_02584	0.68	-0.4
2,885,582	+		MIT1002_02584	0.70	-0.8
2,885,590	-		MIT1002_02584	0.71	+0.2
2,885,637	+		MIT1002_02584	0.78	+0.5
2,885,637	+		MIT1002_02584	0.78	-0.1
2,885,645	-		MIT1002_02584	0.79	+0.9
2,885,682	-		MIT1002_02584	0.84	+1.1
2,885,756	+				-0.2
2,885,789	-				-0.1
2,886,038	+		MIT1002_02585	0.23	-0.2
2,886,051	-		MIT1002_02585	0.25	+0.1
2,886,056	-		MIT1002_02585	0.25	-0.5