Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02494

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 1
2,781,310	-				-1.0
2,781,310	-				-0.2
2,781,322	+				-0.7
2,781,381	+				-0.5
2,781,387	-				-0.6
2,781,448	+		MIT1002_02493	0.11	+0.8
2,781,471	+		MIT1002_02493	0.14	-0.4
2,781,493	-		MIT1002_02493	0.16	+1.0
2,781,493	-		MIT1002_02493	0.16	-2.2
2,781,512	+		MIT1002_02493	0.19	-3.4
2,781,609	+		MIT1002_02493	0.30	-0.9
2,781,617	-		MIT1002_02493	0.31	+0.7
2,781,655	+		MIT1002_02493	0.35	-1.2
2,781,713	+		MIT1002_02493	0.42	+0.8
2,781,846	+		MIT1002_02493	0.58	-0.3
2,781,854	-		MIT1002_02493	0.59	-1.8
2,781,862	-		MIT1002_02493	0.59	+0.8
2,781,983	+		MIT1002_02493	0.74	-1.2
2,781,988	-		MIT1002_02493	0.74	+0.6
2,782,031	-		MIT1002_02493	0.79	+0.7
2,782,100	+		MIT1002_02493	0.87	+1.0
2,782,148	-				-0.4
2,782,207	+				+1.1
2,782,207	+				+0.3
2,782,207	+				-0.1
2,782,207	+				+0.2
2,782,207	+				-0.1
2,782,207	+				-0.2
2,782,215	-				+0.4
2,782,215	-				-2.6
2,782,215	-				-0.0
2,782,215	-				+0.8
2,782,215	-				+0.3
2,782,222	+				+0.2
2,782,222	+				-0.4
2,782,232	+				-0.9
2,782,240	+				-1.2
2,782,291	-				+0.9
2,782,321	-				-2.2
2,782,375	+		MIT1002_02494	0.10	+0.9
2,782,453	-		MIT1002_02494	0.20	-0.8
2,782,457	+		MIT1002_02494	0.21	-2.2
2,782,457	+		MIT1002_02494	0.21	-3.0
2,782,457	+		MIT1002_02494	0.21	-2.2
2,782,465	-		MIT1002_02494	0.22	-1.3
2,782,465	-		MIT1002_02494	0.22	+0.3
2,782,465	-		MIT1002_02494	0.22	-3.5
2,782,472	+		MIT1002_02494	0.22	-0.8
2,782,479	+		MIT1002_02494	0.23	+0.8
2,782,480	-		MIT1002_02494	0.23	-0.8
2,782,603	-		MIT1002_02494	0.39	-2.6
2,782,649	+		MIT1002_02494	0.45	+0.2
2,782,649	+		MIT1002_02494	0.45	+1.3
2,782,656	-		MIT1002_02494	0.46	-2.6
2,782,657	-		MIT1002_02494	0.46	+0.2
2,782,657	-		MIT1002_02494	0.46	+0.1
2,782,657	-		MIT1002_02494	0.46	-0.8
2,782,663	-		MIT1002_02494	0.47	-0.8
2,782,796	+		MIT1002_02494	0.63	-1.3
2,782,796	-		MIT1002_02494	0.63	-0.5
2,782,806	+		MIT1002_02494	0.65	+0.8
2,782,811	+		MIT1002_02494	0.65	+1.5
2,782,811	+		MIT1002_02494	0.65	-0.8
2,782,816	+		MIT1002_02494	0.66	-1.8
2,782,826	-		MIT1002_02494	0.67	-1.1
2,782,838	-		MIT1002_02494	0.69	-1.6
2,782,874	-		MIT1002_02494	0.73	-1.5
2,782,886	-		MIT1002_02494	0.75	-1.4
2,782,886	-		MIT1002_02494	0.75	-0.5
2,782,893	+		MIT1002_02494	0.76	-2.2
2,783,379	+		MIT1002_02495	0.14	-3.5
2,783,387	-		MIT1002_02495	0.14	-0.4
2,783,429	+		MIT1002_02495	0.17	-0.6
2,783,434	+		MIT1002_02495	0.17	-1.8
2,783,485	+		MIT1002_02495	0.20	-0.7
2,783,495	-		MIT1002_02495	0.21	-0.8
2,783,497	+		MIT1002_02495	0.21	+0.2
2,783,497	+		MIT1002_02495	0.21	-1.2
2,783,497	+		MIT1002_02495	0.21	+0.2
2,783,497	+		MIT1002_02495	0.21	-1.1
2,783,497	+		MIT1002_02495	0.21	+0.4
2,783,497	+		MIT1002_02495	0.21	+0.7
2,783,497	+		MIT1002_02495	0.21	-0.5
2,783,505	-		MIT1002_02495	0.21	-0.5
2,783,505	-		MIT1002_02495	0.21	-1.4
2,783,530	-		MIT1002_02495	0.23	-2.7
2,783,562	-		MIT1002_02495	0.25	-0.8
2,783,684	-		MIT1002_02495	0.32	+1.5
2,783,717	+		MIT1002_02495	0.34	-1.0
2,783,783	+		MIT1002_02495	0.38	-2.1
2,783,791	-		MIT1002_02495	0.38	+1.0
2,784,014	+		MIT1002_02495	0.52	-0.7
2,784,035	+		MIT1002_02495	0.53	-1.0
2,784,069	-		MIT1002_02495	0.55	+3.1