Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02395

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 1
2,670,769	+		MIT1002_02394	0.45	-2.9
2,670,775	-		MIT1002_02394	0.45	-4.2
2,670,812	-		MIT1002_02394	0.48	+0.2
2,670,813	-		MIT1002_02394	0.48	-4.7
2,670,824	+		MIT1002_02394	0.49	-1.2
2,670,832	-		MIT1002_02394	0.49	+0.8
2,670,895	+		MIT1002_02394	0.54	-0.0
2,670,960	+		MIT1002_02394	0.58	-3.0
2,671,010	-		MIT1002_02394	0.62	-3.8
2,671,115	+		MIT1002_02394	0.69	-2.0
2,671,147	-		MIT1002_02394	0.71	-2.8
2,671,153	+		MIT1002_02394	0.71	-2.3
2,671,170	+		MIT1002_02394	0.73	-3.8
2,671,178	-		MIT1002_02394	0.73	-1.1
2,671,230	+		MIT1002_02394	0.77	-4.6
2,671,245	+		MIT1002_02394	0.78	-2.6
2,671,313	+		MIT1002_02394	0.83	-1.3
2,671,320	-		MIT1002_02394	0.83	-1.7
2,671,331	-		MIT1002_02394	0.84	-4.4
2,671,331	-		MIT1002_02394	0.84	-3.3
2,671,362	-		MIT1002_02394	0.86	-2.6
2,671,372	-		MIT1002_02394	0.87	-1.7
2,671,470	-				-1.3
2,671,514	+				-2.6
2,671,531	-				-2.3
2,671,580	-				+0.1
2,671,596	+				-1.6
2,671,604	-				-0.6
2,671,623	+				+0.0
2,671,702	+				-3.0
2,671,845	+				-1.4
2,671,866	+		MIT1002_02395	0.12	-0.2
2,672,035	+		MIT1002_02395	0.31	-2.3
2,672,061	+		MIT1002_02395	0.34	-0.3
2,672,071	+		MIT1002_02395	0.35	-0.0
2,672,079	-		MIT1002_02395	0.36	-0.0
2,672,090	-		MIT1002_02395	0.38	+1.2
2,672,151	-		MIT1002_02395	0.44	+0.4
2,672,179	+		MIT1002_02395	0.48	+0.2
2,672,191	+		MIT1002_02395	0.49	+0.6
2,672,199	-		MIT1002_02395	0.50	+0.7
2,672,199	-		MIT1002_02395	0.50	-0.8
2,672,211	+		MIT1002_02395	0.51	+0.0
2,672,226	+		MIT1002_02395	0.53	-0.6
2,672,226	+		MIT1002_02395	0.53	-0.5
2,672,234	-		MIT1002_02395	0.54	-2.9
2,672,254	+		MIT1002_02395	0.56	-1.6
2,672,334	+		MIT1002_02395	0.65	-0.5
2,672,334	+		MIT1002_02395	0.65	-0.3
2,672,363	-		MIT1002_02395	0.68	+1.9
2,672,387	-		MIT1002_02395	0.71	-0.4
2,672,395	+		MIT1002_02395	0.72	-1.9
2,672,532	-		MIT1002_02395	0.87	-1.0
2,672,537	-		MIT1002_02395	0.88	+0.8
2,672,597	-				+2.1
2,672,597	-				-0.7
2,672,655	+				+0.1
2,672,724	+				+0.4
2,672,741	-				-0.0
2,672,780	+				-0.1
2,672,844	+				+0.6
2,672,883	+		MIT1002_02396	0.16	+0.5
2,672,927	+		MIT1002_02396	0.26	+0.1
2,672,949	+		MIT1002_02396	0.31	+0.2
2,672,957	-		MIT1002_02396	0.33	+0.1
2,672,971	+		MIT1002_02396	0.36	+0.2
2,672,986	+		MIT1002_02396	0.40	-0.5
2,673,010	-		MIT1002_02396	0.45	-3.0
2,673,101	-		MIT1002_02396	0.67	+0.0
2,673,109	-		MIT1002_02396	0.69	+0.8
2,673,120	+		MIT1002_02396	0.71	+0.9
2,673,212	+				-0.6
2,673,251	-				+0.6
2,673,304	+				-2.7
2,673,333	-				+0.3
2,673,358	+				+0.3
2,673,366	-				+0.7
2,673,373	+				-1.3
2,673,373	+				-0.9
2,673,396	-				-1.4
2,673,436	+				-1.4
2,673,477	+				+0.1
2,673,534	+		MIT1002_02397	0.12	+1.0