Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02218

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 1
2,477,114	+				+0.8
2,477,134	+				+2.8
2,477,137	-				+1.1
2,477,144	+				+0.4
2,477,144	+				+1.5
2,477,152	-				+0.4
2,477,152	-				+2.0
2,477,198	+				-0.0
2,477,206	-				-0.5
2,477,268	+		MIT1002_02217	0.11	+0.4
2,477,330	-		MIT1002_02217	0.19	-2.0
2,477,342	+		MIT1002_02217	0.21	+0.1
2,477,362	+		MIT1002_02217	0.23	-1.9
2,477,378	-		MIT1002_02217	0.25	+0.0
2,477,475	-		MIT1002_02217	0.39	-0.3
2,477,523	-		MIT1002_02217	0.45	-0.4
2,477,715	-		MIT1002_02217	0.71	+0.5
2,477,811	+		MIT1002_02217	0.84	+0.2
2,477,819	-		MIT1002_02217	0.85	-0.4
2,478,019	-				+0.6
2,478,094	-		MIT1002_02218	0.11	-1.2
2,478,118	-		MIT1002_02218	0.13	-1.5
2,478,275	-		MIT1002_02218	0.23	-2.2
2,478,339	-		MIT1002_02218	0.28	-0.9
2,478,344	-		MIT1002_02218	0.28	-0.9
2,478,587	+		MIT1002_02218	0.45	-2.2
2,478,651	+		MIT1002_02218	0.49	-0.8
2,478,745	+		MIT1002_02218	0.56	-0.9
2,479,153	-		MIT1002_02218	0.84	+0.1
2,479,256	-				-2.1
2,479,444	+				+0.6
2,479,467	+				+0.1
2,479,488	+				+0.8
2,479,519	+				-1.2
2,479,527	-				+0.8
2,479,690	-				+0.7
2,479,690	-				-4.3
2,479,690	-				-3.4
2,479,782	+				-1.0
2,479,843	-		MIT1002_02219	0.15	-1.2
2,479,915	-		MIT1002_02219	0.22	-2.5
2,479,929	+		MIT1002_02219	0.23	-3.3
2,479,934	-		MIT1002_02219	0.23	-1.3
2,479,973	+		MIT1002_02219	0.27	-1.7
2,479,973	+		MIT1002_02219	0.27	-2.7
2,479,973	+		MIT1002_02219	0.27	-3.5
2,479,981	-		MIT1002_02219	0.28	-0.5
2,479,988	+		MIT1002_02219	0.29	-0.9
2,479,996	-		MIT1002_02219	0.29	-1.6
2,479,996	-		MIT1002_02219	0.29	-4.2
2,480,021	+		MIT1002_02219	0.32	-1.6
2,480,039	-		MIT1002_02219	0.34	-1.9
2,480,096	-		MIT1002_02219	0.39	-2.1
2,480,166	+		MIT1002_02219	0.46	-1.4
2,480,189	-		MIT1002_02219	0.48	-4.7
2,480,196	+		MIT1002_02219	0.49	-1.3
2,480,214	+		MIT1002_02219	0.50	-2.4
2,480,214	+		MIT1002_02219	0.50	-2.5
2,480,214	+		MIT1002_02219	0.50	-2.7
2,480,222	-		MIT1002_02219	0.51	-2.2
2,480,222	-		MIT1002_02219	0.51	-2.6
2,480,222	-		MIT1002_02219	0.51	-2.5
2,480,222	-		MIT1002_02219	0.51	-0.7
2,480,222	-		MIT1002_02219	0.51	-2.0
2,480,260	+		MIT1002_02219	0.55	-1.7
2,480,260	+		MIT1002_02219	0.55	-1.7
2,480,311	+		MIT1002_02219	0.60	-2.9