Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02211

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 1
2,470,663	-		MIT1002_02210	0.59	+0.1
2,470,808	+		MIT1002_02210	0.73	+0.9
2,470,808	+		MIT1002_02210	0.73	-2.3
2,470,841	+		MIT1002_02210	0.76	-0.2
2,470,859	-		MIT1002_02210	0.77	-0.0
2,470,899	-		MIT1002_02210	0.81	+0.8
2,470,919	+		MIT1002_02210	0.83	-1.2
2,470,981	+		MIT1002_02210	0.89	+0.1
2,470,982	-		MIT1002_02210	0.89	+0.4
2,471,004	-				-3.6
2,471,014	+				+0.8
2,471,133	-				-1.7
2,471,160	-				+0.4
2,471,164	+				-0.4
2,471,393	+				+0.1
2,471,415	-				+0.7
2,471,415	-				-0.7
2,471,417	+				+0.3
2,471,425	-				-0.4
2,471,425	-				+1.5
2,471,426	-				+0.2
2,471,496	+				-1.8
2,471,496	+				+0.3
2,471,687	+		MIT1002_02211	0.16	-0.1
2,471,691	-		MIT1002_02211	0.17	-0.9
2,471,807	+		MIT1002_02211	0.25	+0.9
2,471,807	+		MIT1002_02211	0.25	-1.3
2,471,807	+		MIT1002_02211	0.25	+0.3
2,471,807	+		MIT1002_02211	0.25	-1.6
2,471,807	+		MIT1002_02211	0.25	-0.4
2,471,815	-		MIT1002_02211	0.25	-0.8
2,471,815	-		MIT1002_02211	0.25	-1.7
2,471,816	-		MIT1002_02211	0.25	-0.9
2,471,884	-		MIT1002_02211	0.30	-1.9
2,471,904	-		MIT1002_02211	0.31	-0.7
2,471,919	+		MIT1002_02211	0.32	-4.3
2,471,924	+		MIT1002_02211	0.33	+0.1
2,471,930	+		MIT1002_02211	0.33	-2.4
2,471,932	-		MIT1002_02211	0.33	-1.8
2,471,932	-		MIT1002_02211	0.33	-1.4
2,471,932	-		MIT1002_02211	0.33	-0.3
2,471,932	-		MIT1002_02211	0.33	-1.4
2,471,976	-		MIT1002_02211	0.36	-2.2
2,471,981	-		MIT1002_02211	0.36	-0.2
2,472,190	+		MIT1002_02211	0.51	-0.6
2,472,233	+		MIT1002_02211	0.54	-1.2
2,472,241	+		MIT1002_02211	0.54	-0.8
2,472,241	+		MIT1002_02211	0.54	-0.7
2,472,318	-		MIT1002_02211	0.59	-0.6
2,472,329	+		MIT1002_02211	0.60	-0.2
2,472,335	-		MIT1002_02211	0.61	-0.4
2,472,336	+		MIT1002_02211	0.61	-0.3
2,472,404	+		MIT1002_02211	0.65	-1.6
2,472,450	-		MIT1002_02211	0.69	-0.5
2,472,608	+		MIT1002_02211	0.79	-1.3
2,472,748	+		MIT1002_02211	0.89	-1.8
2,472,779	+				-0.8
2,472,779	+				-0.5
2,472,779	+				-1.4
2,472,779	+				+0.1
2,472,779	+				-2.2
2,472,779	+				+0.3
2,472,779	+				+1.9
2,472,779	+				+1.1
2,472,779	+				-3.0
2,472,787	-				-0.9
2,472,787	-				-0.9
2,472,787	-				-1.7
2,472,902	-				-2.5
2,472,904	+				+1.2
2,472,905	+				-2.2
2,472,912	-				-2.7
2,472,912	-				+0.8
2,472,912	-				-0.4
2,472,912	-				-0.9
2,472,912	-				-0.1
2,472,913	-				-0.0
2,473,034	-		MIT1002_02212	0.21	+0.9
2,473,063	+		MIT1002_02212	0.26	-1.6
2,473,153	-		MIT1002_02212	0.44	-0.8
2,473,202	+		MIT1002_02212	0.53	-0.1
2,473,202	+		MIT1002_02212	0.53	+0.6
2,473,236	+		MIT1002_02212	0.60	+1.3
2,473,236	+		MIT1002_02212	0.60	-0.5
2,473,243	+		MIT1002_02212	0.61	-0.2
2,473,268	+		MIT1002_02212	0.66	-1.9
2,473,268	+		MIT1002_02212	0.66	+0.7
2,473,312	-		MIT1002_02212	0.75	-0.2
2,473,347	+		MIT1002_02212	0.82	-0.2
2,473,437	+				+0.3
2,473,438	+				+0.2
2,473,486	-				+0.1
2,473,638	-				-0.4
2,473,711	+		MIT1002_02213	0.15	-0.1
2,473,767	-		MIT1002_02213	0.31	-2.2
2,473,883	-		MIT1002_02213	0.63	-0.0