Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02015

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 1
2,255,991	-		MIT1002_02014	0.51	-2.4
2,256,053	+		MIT1002_02014	0.55	-0.0
2,256,062	-		MIT1002_02014	0.56	-0.9
2,256,088	+		MIT1002_02014	0.57	-0.7
2,256,109	-		MIT1002_02014	0.58	-0.8
2,256,109	-		MIT1002_02014	0.58	-0.9
2,256,173	+		MIT1002_02014	0.62	+1.3
2,256,183	+		MIT1002_02014	0.63	-0.5
2,256,191	+		MIT1002_02014	0.63	-1.9
2,256,191	-		MIT1002_02014	0.63	-2.6
2,256,191	-		MIT1002_02014	0.63	-2.0
2,256,218	+		MIT1002_02014	0.65	-0.4
2,256,245	+		MIT1002_02014	0.66	-0.9
2,256,307	-		MIT1002_02014	0.70	-0.0
2,256,338	+		MIT1002_02014	0.72	-2.5
2,256,387	+		MIT1002_02014	0.75	-0.8
2,256,506	+		MIT1002_02014	0.82	-1.8
2,256,506	+		MIT1002_02014	0.82	+1.5
2,256,506	+		MIT1002_02014	0.82	-0.5
2,256,506	+		MIT1002_02014	0.82	+0.8
2,256,514	-		MIT1002_02014	0.82	-1.1
2,256,514	-		MIT1002_02014	0.82	-0.1
2,256,514	-		MIT1002_02014	0.82	-0.3
2,256,514	-		MIT1002_02014	0.82	-0.8
2,256,514	-		MIT1002_02014	0.82	-0.8
2,256,514	-		MIT1002_02014	0.82	-0.7
2,256,536	+		MIT1002_02014	0.84	-1.6
2,256,536	+		MIT1002_02014	0.84	-0.5
2,256,544	-		MIT1002_02014	0.84	+0.7
2,256,544	-		MIT1002_02014	0.84	-3.2
2,256,544	-		MIT1002_02014	0.84	-2.0
2,256,544	-		MIT1002_02014	0.84	+0.1
2,256,544	-		MIT1002_02014	0.84	-0.2
2,256,659	-				+0.6
2,256,673	-				-1.8
2,256,722	+				-2.2
2,256,904	-				-0.2
2,256,971	+				+0.7
2,256,983	+				-0.6
2,256,991	-				-0.2
2,257,009	-				-0.1
2,257,099	+		MIT1002_02015	0.15	-0.5
2,257,102	-		MIT1002_02015	0.16	-1.3
2,257,146	+		MIT1002_02015	0.21	-0.3
2,257,186	+		MIT1002_02015	0.25	+0.1
2,257,362	-		MIT1002_02015	0.45	-0.9
2,257,431	+		MIT1002_02015	0.53	-0.9
2,257,466	+		MIT1002_02015	0.57	-0.9
2,257,508	-		MIT1002_02015	0.62	-1.8
2,257,516	-		MIT1002_02015	0.63	-0.1
2,257,641	-		MIT1002_02015	0.77	-0.2
2,257,700	-		MIT1002_02015	0.84	-1.9
2,257,876	-				-1.2
2,257,917	+				-1.5
2,257,935	+				-0.1
2,258,020	+				+1.0
2,258,049	+				-0.7
2,258,055	+				-0.4
2,258,096	-				+0.7
2,258,170	-		MIT1002_02016	0.13	-0.6
2,258,225	-		MIT1002_02016	0.16	-0.9
2,258,303	-		MIT1002_02016	0.20	+0.2
2,258,309	-		MIT1002_02016	0.20	+0.5
2,258,439	+		MIT1002_02016	0.27	-0.2
2,258,439	+		MIT1002_02016	0.27	-0.1
2,258,459	+		MIT1002_02016	0.28	-0.4
2,258,467	-		MIT1002_02016	0.29	-0.0
2,258,506	+		MIT1002_02016	0.31	-0.1
2,258,511	+		MIT1002_02016	0.31	+0.1
2,258,582	+		MIT1002_02016	0.35	-0.8
2,258,641	-		MIT1002_02016	0.38	-0.8
2,258,835	-		MIT1002_02016	0.48	-0.9
2,258,837	+		MIT1002_02016	0.48	-0.7