Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02010

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 1
2,246,834	-				+0.0
2,246,979	+				+0.3
2,247,146	+				+0.5
2,247,248	-				-0.2
2,247,368	-		MIT1002_02010	0.18	-0.2
2,247,401	+		MIT1002_02010	0.21	-0.0
2,247,401	+		MIT1002_02010	0.21	+0.3
2,247,401	+		MIT1002_02010	0.21	-0.1
2,247,414	-		MIT1002_02010	0.22	+2.6
2,247,468	+		MIT1002_02010	0.26	+0.3
2,247,482	+		MIT1002_02010	0.27	-0.3
2,247,561	+		MIT1002_02010	0.33	-1.4
2,247,569	-		MIT1002_02010	0.34	+1.2
2,247,574	+		MIT1002_02010	0.34	-1.7
2,247,591	+		MIT1002_02010	0.35	+0.2
2,247,652	+		MIT1002_02010	0.40	+0.0
2,247,665	-		MIT1002_02010	0.41	-0.1
2,247,779	+		MIT1002_02010	0.50	+1.3
2,247,779	+		MIT1002_02010	0.50	-0.7
2,247,779	+		MIT1002_02010	0.50	-0.9
2,247,787	-		MIT1002_02010	0.50	-0.3
2,248,015	-		MIT1002_02010	0.68	+0.3
2,248,319	+				+0.2
2,248,513	+				-0.1
2,248,531	+				-0.5
2,248,616	+				+0.7
2,248,622	+				-0.7
2,248,622	+				-1.7
2,248,630	-				-0.5
2,248,668	+				+1.3
2,248,676	-				-1.5
2,248,707	-				+0.6
2,248,725	+				-1.7
2,248,725	+				-0.3
2,248,733	+				-0.5
2,248,733	+				-2.6
2,248,733	+				-0.5
2,248,733	+				+0.1
2,248,733	+				+0.1
2,248,733	+				+0.7
2,248,733	+				-0.5
2,248,733	-				+0.1
2,248,741	-				+0.2
2,248,741	-				-3.6
2,248,741	-				-0.6
2,248,741	-				-0.8
2,248,741	-				-0.1
2,248,741	-				-0.1
2,248,741	-				+0.2
2,248,741	-				-1.7
2,248,741	-				-2.1
2,248,741	-				-0.5
2,248,741	-				-0.1
2,248,741	-				-1.9
2,248,797	-				-2.0
2,248,807	-				+1.0
2,248,889	+		MIT1002_02011	0.11	-0.6
2,248,889	+		MIT1002_02011	0.11	+1.3
2,248,929	+		MIT1002_02011	0.12	+0.2
2,248,937	-		MIT1002_02011	0.12	+0.6
2,248,937	-		MIT1002_02011	0.12	+0.2
2,248,972	+		MIT1002_02011	0.13	+0.0
2,249,000	+		MIT1002_02011	0.13	-0.1
2,249,003	+		MIT1002_02011	0.13	+0.7
2,249,016	-		MIT1002_02011	0.14	+0.4
2,249,016	-		MIT1002_02011	0.14	+0.3
2,249,016	-		MIT1002_02011	0.14	-1.1
2,249,037	+		MIT1002_02011	0.14	+0.0
2,249,045	+		MIT1002_02011	0.15	+0.7
2,249,053	-		MIT1002_02011	0.15	-0.1
2,249,057	+		MIT1002_02011	0.15	+0.6
2,249,063	-		MIT1002_02011	0.15	-1.1
2,249,126	+		MIT1002_02011	0.17	-0.5
2,249,136	-		MIT1002_02011	0.17	-0.4
2,249,155	-		MIT1002_02011	0.17	+0.1
2,249,244	+		MIT1002_02011	0.20	-0.4
2,249,287	-		MIT1002_02011	0.21	-2.0
2,249,316	-		MIT1002_02011	0.21	-1.8
2,249,340	-		MIT1002_02011	0.22	-0.1
2,249,340	-		MIT1002_02011	0.22	+0.1
2,249,362	+		MIT1002_02011	0.23	+0.4
2,249,400	+		MIT1002_02011	0.23	-0.1