Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01815

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 1
2,021,815	-				+0.3
2,021,849	+				-0.7
2,021,857	-				+0.4
2,021,857	-				-1.2
2,021,857	-				+0.2
2,021,897	+		MIT1002_01814	0.15	-0.6
2,021,944	-		MIT1002_01814	0.21	+0.3
2,022,023	+		MIT1002_01814	0.31	-0.2
2,022,024	-		MIT1002_01814	0.31	-2.3
2,022,083	+		MIT1002_01814	0.39	-0.3
2,022,097	+		MIT1002_01814	0.41	-0.0
2,022,107	+		MIT1002_01814	0.42	+1.3
2,022,142	-		MIT1002_01814	0.47	+1.5
2,022,145	+		MIT1002_01814	0.47	+0.6
2,022,246	-		MIT1002_01814	0.60	+0.2
2,022,362	-		MIT1002_01814	0.75	+0.7
2,022,477	+		MIT1002_01814	0.90	+1.1
2,022,514	+				-0.5
2,022,522	-				+0.6
2,022,571	+				-0.5
2,022,613	+				-0.3
2,022,623	+				-0.4
2,022,649	+				+0.4
2,022,651	+				+0.7
2,022,674	+				-1.2
2,022,681	+				+0.4
2,022,682	-				-0.6
2,022,682	-				-0.2
2,022,709	-				-0.5
2,022,776	-				+0.8
2,022,783	+				+0.7
2,022,784	+				+0.5
2,022,878	+		MIT1002_01815	0.13	-1.6
2,022,903	-		MIT1002_01815	0.16	+0.4
2,022,903	-		MIT1002_01815	0.16	+1.0
2,022,971	-		MIT1002_01815	0.25	-1.6
2,023,010	+		MIT1002_01815	0.30	-0.4
2,023,010	+		MIT1002_01815	0.30	-1.0
2,023,010	+		MIT1002_01815	0.30	-0.4
2,023,010	+		MIT1002_01815	0.30	-1.9
2,023,015	+		MIT1002_01815	0.30	+1.6
2,023,018	-		MIT1002_01815	0.31	-1.1
2,023,018	-		MIT1002_01815	0.31	-0.8
2,023,027	+		MIT1002_01815	0.32	-2.4
2,023,062	+		MIT1002_01815	0.36	-1.7
2,023,062	+		MIT1002_01815	0.36	-1.2
2,023,130	+		MIT1002_01815	0.44	-1.0
2,023,196	-		MIT1002_01815	0.52	-2.6
2,023,534	+				-0.8
2,023,542	-				-0.9
2,023,542	-				+0.4
2,023,550	-				-0.8
2,023,565	+				+0.4
2,023,582	+				+0.3
2,023,628	+				+0.1
2,023,691	-				+0.4
2,023,735	-				-0.7
2,023,749	+				+2.6
2,023,844	+				+0.5
2,023,844	+				-0.1
2,023,844	+				-2.0
2,023,844	+				+0.3
2,023,844	+				-0.5
2,023,844	+				+1.1
2,023,844	+				+0.5
2,023,844	+				-0.3
2,023,844	+				-0.3
2,023,844	+				+1.7
2,023,844	+				+0.1
2,023,852	-				-1.3
2,023,852	-				+0.1
2,023,852	-				-0.0
2,023,852	-				-0.9
2,023,852	-				+0.3
2,023,852	-				-0.2
2,023,852	-				-1.1
2,023,852	-				-0.7
2,023,852	-				+1.7
2,023,852	-				+1.4
2,023,852	-				+0.1
2,023,862	-				+2.1
2,023,884	-				+1.9
2,023,891	+				-0.2
2,023,981	+				-0.6
2,024,029	+				-0.5
2,024,029	+				+0.3
2,024,052	+				+0.6
2,024,052	+				-0.8
2,024,052	+				-0.9
2,024,052	+				+0.9
2,024,052	+				+1.2
2,024,052	+				-1.0
2,024,060	-				-0.5
2,024,060	-				+0.8
2,024,060	-				-2.2
2,024,060	-				+2.0
2,024,060	-				+0.3
2,024,060	-				-1.1
2,024,070	-				+0.9
2,024,181	+		MIT1002_01816	0.14	-0.9
2,024,181	+		MIT1002_01816	0.14	+1.0
2,024,181	+		MIT1002_01816	0.14	-1.2
2,024,209	+		MIT1002_01816	0.15	-0.5
2,024,227	-		MIT1002_01816	0.16	-0.8
2,024,322	+		MIT1002_01816	0.20	+0.1
2,024,366	-		MIT1002_01816	0.22	+0.7
2,024,373	+		MIT1002_01816	0.22	-0.9
2,024,373	+		MIT1002_01816	0.22	+0.6
2,024,381	-		MIT1002_01816	0.22	-0.2
2,024,387	-		MIT1002_01816	0.22	+0.0
2,024,387	-		MIT1002_01816	0.22	-0.7
2,024,402	-		MIT1002_01816	0.23	-1.8
2,024,405	+		MIT1002_01816	0.23	-0.5
2,024,451	+		MIT1002_01816	0.25	+0.1
2,024,451	+		MIT1002_01816	0.25	-0.7
2,024,482	+		MIT1002_01816	0.26	-1.2
2,024,483	-		MIT1002_01816	0.27	+0.6
2,024,523	+		MIT1002_01816	0.28	-1.3
2,024,540	+		MIT1002_01816	0.29	-0.3
2,024,540	+		MIT1002_01816	0.29	-1.2
2,024,542	-		MIT1002_01816	0.29	-0.2
2,024,546	+		MIT1002_01816	0.29	+0.0
2,024,554	-		MIT1002_01816	0.29	-0.9