Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01710

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 1
1,899,240	-				-0.1
1,899,320	+		MIT1002_01709	0.20	-1.0
1,899,351	+		MIT1002_01709	0.24	+0.5
1,899,356	+		MIT1002_01709	0.24	-3.6
1,899,356	+		MIT1002_01709	0.24	+1.0
1,899,364	-		MIT1002_01709	0.25	-0.2
1,899,364	-		MIT1002_01709	0.25	-1.1
1,899,381	+		MIT1002_01709	0.28	-2.2
1,899,434	+		MIT1002_01709	0.34	+1.3
1,899,491	+		MIT1002_01709	0.42	-1.3
1,899,572	+		MIT1002_01709	0.52	-0.4
1,899,572	+		MIT1002_01709	0.52	+0.3
1,899,579	+		MIT1002_01709	0.53	-0.2
1,899,580	-		MIT1002_01709	0.53	-0.1
1,899,585	-		MIT1002_01709	0.54	-0.6
1,899,587	-		MIT1002_01709	0.54	+0.8
1,899,689	+		MIT1002_01709	0.67	-0.5
1,899,697	-		MIT1002_01709	0.68	+0.4
1,899,718	+		MIT1002_01709	0.71	+0.3
1,899,767	+		MIT1002_01709	0.77	+0.1
1,899,770	+		MIT1002_01709	0.77	+0.5
1,899,775	-		MIT1002_01709	0.78	+0.9
1,899,814	-		MIT1002_01709	0.83	+0.8
1,899,814	-		MIT1002_01709	0.83	-1.2
1,899,890	+				+0.8
1,899,940	+				-1.2
1,899,948	+				-2.2
1,899,948	+				+0.2
1,899,985	+				-1.4
1,899,988	-				-0.6
1,900,142	+				-1.3
1,900,183	+				+0.3
1,900,228	+				+1.5
1,900,231	-				+1.3
1,900,236	-				-0.4
1,900,236	-				-2.2
1,900,238	+				-0.4
1,900,318	+		MIT1002_01710	0.18	-2.4
1,900,411	-		MIT1002_01710	0.28	+0.8
1,900,411	-		MIT1002_01710	0.28	+0.8
1,900,411	-		MIT1002_01710	0.28	+0.3
1,900,496	+		MIT1002_01710	0.38	-1.9
1,900,499	-		MIT1002_01710	0.38	+0.9
1,900,501	+		MIT1002_01710	0.38	+0.1
1,900,504	-		MIT1002_01710	0.39	-1.3
1,900,511	-		MIT1002_01710	0.39	-1.4
1,900,575	-		MIT1002_01710	0.46	+0.6
1,900,616	-		MIT1002_01710	0.51	+0.4
1,900,628	+		MIT1002_01710	0.52	-2.7
1,900,641	+		MIT1002_01710	0.54	-0.3
1,900,655	+		MIT1002_01710	0.55	+0.7
1,900,669	-		MIT1002_01710	0.57	+0.3
1,900,680	+		MIT1002_01710	0.58	+1.9
1,900,684	+		MIT1002_01710	0.58	+1.0
1,900,689	+		MIT1002_01710	0.59	+0.5
1,900,690	+		MIT1002_01710	0.59	+1.3
1,900,765	-		MIT1002_01710	0.67	-2.2
1,900,773	-		MIT1002_01710	0.68	+0.5
1,900,785	+		MIT1002_01710	0.69	+0.8
1,900,869	+		MIT1002_01710	0.79	-1.5
1,900,897	-		MIT1002_01710	0.82	+0.8
1,900,982	-				-1.9
1,901,010	-				-1.3
1,901,010	-				-0.7
1,901,040	+				+0.4
1,901,101	+				+0.2
1,901,132	-		MIT1002_01711	0.12	-0.4
1,901,206	+		MIT1002_01711	0.23	+0.2
1,901,206	-		MIT1002_01711	0.23	+0.7
1,901,214	-		MIT1002_01711	0.25	+0.3
1,901,292	-		MIT1002_01711	0.37	-1.5
1,901,308	+		MIT1002_01711	0.39	-0.1
1,901,464	+		MIT1002_01711	0.64	+0.1
1,901,467	-		MIT1002_01711	0.64	-1.2
1,901,474	+		MIT1002_01711	0.65	-1.3
1,901,480	-		MIT1002_01711	0.66	+1.0
1,901,641	+				-0.2
1,901,645	-				-0.8
1,901,649	-				-0.5
1,901,659	-				-0.4
1,901,735	+				+0.7
1,901,741	-				+1.2
1,901,807	-		MIT1002_01712	0.16	-0.6
1,901,892	-		MIT1002_01712	0.27	-0.0
1,901,915	+		MIT1002_01712	0.30	+0.2
1,901,915	+		MIT1002_01712	0.30	-0.5
1,901,993	-		MIT1002_01712	0.39	-0.2
1,902,000	+		MIT1002_01712	0.40	+0.5
1,902,017	+		MIT1002_01712	0.43	+0.3
1,902,023	-		MIT1002_01712	0.43	-1.0
1,902,025	-		MIT1002_01712	0.44	+1.0
1,902,025	-		MIT1002_01712	0.44	+1.2