Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01651

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 1
1,824,317	+				-2.5
1,824,382	-				-0.0
1,824,418	-				-0.7
1,824,466	-				-0.8
1,824,592	-				+0.2
1,824,763	-		MIT1002_01650	0.58	+0.9
1,824,798	+		MIT1002_01650	0.74	-0.0
1,824,868	+				+1.2
1,824,868	+				-1.8
1,824,899	+				-0.1
1,824,960	+				-0.6
1,825,067	-				-0.9
1,825,100	-				+1.2
1,825,185	+		MIT1002_01651	0.13	-1.2
1,825,193	-		MIT1002_01651	0.14	-1.2
1,825,193	-		MIT1002_01651	0.14	+1.8
1,825,206	+		MIT1002_01651	0.16	-1.0
1,825,264	+		MIT1002_01651	0.25	-1.6
1,825,307	-		MIT1002_01651	0.32	-0.6
1,825,307	-		MIT1002_01651	0.32	+0.3
1,825,381	-		MIT1002_01651	0.43	-0.5
1,825,413	+		MIT1002_01651	0.48	-0.8
1,825,413	+		MIT1002_01651	0.48	-0.1
1,825,415	+		MIT1002_01651	0.48	-0.6
1,825,421	-		MIT1002_01651	0.49	-1.4
1,825,421	-		MIT1002_01651	0.49	+1.0
1,825,423	+		MIT1002_01651	0.50	-1.8
1,825,431	-		MIT1002_01651	0.51	+0.5
1,825,488	-		MIT1002_01651	0.60	-0.5
1,825,630	+		MIT1002_01651	0.82	-0.6
1,825,649	+		MIT1002_01651	0.85	-0.2
1,825,684	-				-1.2
1,825,730	+				+1.1
1,825,736	-				-1.4
1,825,738	-				+0.4
1,825,745	+				-0.7
1,825,778	-				+0.9
1,825,785	-				+0.2
1,825,787	+				-0.1
1,825,805	+				+0.8
1,825,813	-				-0.2
1,825,841	+				+0.4
1,825,921	-		MIT1002_01652	0.16	-0.9
1,825,941	+		MIT1002_01652	0.19	-0.2
1,826,020	+		MIT1002_01652	0.29	+0.5
1,826,116	+		MIT1002_01652	0.40	+0.2
1,826,116	+		MIT1002_01652	0.40	+0.5
1,826,166	+		MIT1002_01652	0.47	+0.7
1,826,172	-		MIT1002_01652	0.47	-0.3
1,826,172	-		MIT1002_01652	0.47	+1.6
1,826,203	-		MIT1002_01652	0.51	+1.9
1,826,298	-		MIT1002_01652	0.63	-0.1
1,826,312	-		MIT1002_01652	0.65	-0.2
1,826,424	-		MIT1002_01652	0.78	+0.1
1,826,455	-		MIT1002_01652	0.82	+1.2
1,826,460	-		MIT1002_01652	0.83	+1.6
1,826,513	-		MIT1002_01652	0.89	-0.6
1,826,651	-				-0.8
1,826,674	+				+0.2
1,826,682	-				+0.5
1,826,736	-				-0.3