Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01622

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 1
1,786,728	-		MIT1002_01621	0.30	-2.3
1,786,827	-		MIT1002_01621	0.38	-1.1
1,786,854	-		MIT1002_01621	0.40	+0.6
1,786,934	+		MIT1002_01621	0.46	+0.0
1,786,971	-		MIT1002_01621	0.49	-1.5
1,787,044	-		MIT1002_01621	0.54	-1.8
1,787,101	+		MIT1002_01621	0.58	-1.0
1,787,209	-		MIT1002_01621	0.66	-1.2
1,787,308	+		MIT1002_01621	0.74	-0.9
1,787,311	-		MIT1002_01621	0.74	+0.1
1,787,359	-		MIT1002_01621	0.78	+0.9
1,787,434	+		MIT1002_01621	0.83	+0.6
1,787,460	+		MIT1002_01621	0.85	-3.6
1,787,536	+				+0.5
1,787,554	+				+0.2
1,787,678	-				-0.8
1,787,701	+				+0.4
1,787,761	+				-0.6
1,787,763	+				+1.4
1,787,776	+		MIT1002_01622	0.11	+0.5
1,787,776	+		MIT1002_01622	0.11	-0.4
1,787,776	+		MIT1002_01622	0.11	-0.4
1,787,776	+		MIT1002_01622	0.11	+0.2
1,787,784	-		MIT1002_01622	0.12	-1.2
1,787,909	+		MIT1002_01622	0.23	+0.2
1,787,956	-		MIT1002_01622	0.27	-0.9
1,787,963	-		MIT1002_01622	0.28	-1.7
1,787,963	-		MIT1002_01622	0.28	-0.7
1,787,963	-		MIT1002_01622	0.28	-1.8
1,788,023	-		MIT1002_01622	0.33	+0.0
1,788,055	-		MIT1002_01622	0.36	-0.1
1,788,101	+		MIT1002_01622	0.40	+0.1
1,788,109	-		MIT1002_01622	0.41	-1.7
1,788,179	-		MIT1002_01622	0.47	-2.4
1,788,296	+		MIT1002_01622	0.58	+0.6
1,788,304	-		MIT1002_01622	0.59	+0.3
1,788,304	-		MIT1002_01622	0.59	-2.7
1,788,304	-		MIT1002_01622	0.59	-1.2
1,788,315	+		MIT1002_01622	0.60	-0.6
1,788,323	-		MIT1002_01622	0.60	+1.0
1,788,376	+		MIT1002_01622	0.65	-0.6
1,788,376	+		MIT1002_01622	0.65	+0.4
1,788,440	+		MIT1002_01622	0.71	+1.0
1,788,440	+		MIT1002_01622	0.71	-0.2
1,788,440	+		MIT1002_01622	0.71	-1.6
1,788,448	-		MIT1002_01622	0.72	-1.2
1,788,474	+		MIT1002_01622	0.74	-0.9
1,788,482	-		MIT1002_01622	0.75	+1.0
1,788,490	-		MIT1002_01622	0.75	-0.8
1,788,490	-		MIT1002_01622	0.75	+0.3
1,788,500	+		MIT1002_01622	0.76	+0.5
1,788,500	+		MIT1002_01622	0.76	+1.0
1,788,500	+		MIT1002_01622	0.76	-0.5
1,788,503	-		MIT1002_01622	0.76	-0.7
1,788,508	-		MIT1002_01622	0.77	+1.6
1,788,508	-		MIT1002_01622	0.77	-0.2
1,788,512	-		MIT1002_01622	0.77	+1.9
1,788,569	+		MIT1002_01622	0.82	-1.4
1,788,582	+		MIT1002_01622	0.84	+0.4
1,788,582	+		MIT1002_01622	0.84	-0.4
1,788,587	+		MIT1002_01622	0.84	-0.7
1,788,590	-		MIT1002_01622	0.84	+0.7
1,788,590	-		MIT1002_01622	0.84	+0.3
1,788,613	+		MIT1002_01622	0.86	-1.4
1,788,639	+		MIT1002_01622	0.89	+0.2
1,788,697	-				-0.2
1,788,698	+				+0.9
1,788,749	-				-1.6
1,788,790	-				+0.1
1,788,847	-				-0.3
1,788,890	-		MIT1002_01623	0.15	-0.1
1,788,918	-		MIT1002_01623	0.18	+0.4
1,788,940	-		MIT1002_01623	0.21	-0.5
1,788,940	-		MIT1002_01623	0.21	-0.0
1,789,054	+		MIT1002_01623	0.34	+0.3
1,789,081	+		MIT1002_01623	0.37	+0.8
1,789,086	+		MIT1002_01623	0.37	-0.2
1,789,094	-		MIT1002_01623	0.38	+1.6
1,789,150	+		MIT1002_01623	0.45	+0.6
1,789,205	+		MIT1002_01623	0.51	-0.5
1,789,253	-		MIT1002_01623	0.57	+1.0
1,789,275	+		MIT1002_01623	0.59	+0.7
1,789,276	-		MIT1002_01623	0.59	-0.1
1,789,418	-		MIT1002_01623	0.76	-0.3
1,789,424	-		MIT1002_01623	0.76	+0.6
1,789,471	+		MIT1002_01623	0.82	-0.7
1,789,594	+				-0.8
1,789,594	+				-0.9
1,789,602	-				-0.4
1,789,609	-				-0.0
1,789,609	-				+0.6
1,789,609	-				+0.3
1,789,625	-				-0.7