Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01556

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 1
1,708,001	+				-0.6
1,708,001	+				-2.7
1,708,087	+				-0.6
1,708,087	+				+0.6
1,708,087	+				+0.6
1,708,087	+				+0.4
1,708,087	+				-1.8
1,708,087	+				-0.9
1,708,087	+				+0.2
1,708,095	-				+0.2
1,708,095	-				-0.0
1,708,095	-				-2.6
1,708,095	-				+0.2
1,708,095	-				+0.6
1,708,099	+				+0.2
1,708,128	+				-2.3
1,708,136	+				-0.7
1,708,136	-				-0.3
1,708,215	+				+1.4
1,708,264	+				+0.6
1,708,273	-				-0.0
1,708,338	+				-0.8
1,708,338	+				+2.1
1,708,346	-				+0.1
1,708,346	-				+0.4
1,708,346	-				-0.1
1,708,346	-				-0.5
1,708,456	-		MIT1002_01555	0.21	-0.5
1,708,486	+		MIT1002_01555	0.28	-0.3
1,708,622	-		MIT1002_01555	0.60	-1.0
1,708,742	+		MIT1002_01555	0.88	+0.2
1,708,789	-				-2.4
1,708,817	+				-0.6
1,708,832	+				-0.7
1,708,958	+				-1.3
1,708,958	+				-0.0
1,708,958	+				+0.1
1,709,025	+				+0.1
1,709,127	+		MIT1002_01556	0.12	-0.7
1,709,127	+		MIT1002_01556	0.12	+0.3
1,709,135	-		MIT1002_01556	0.12	+1.1
1,709,135	-		MIT1002_01556	0.12	-0.6
1,709,135	-		MIT1002_01556	0.12	-0.9
1,709,139	+		MIT1002_01556	0.13	+0.6
1,709,226	+		MIT1002_01556	0.21	-0.8
1,709,234	-		MIT1002_01556	0.22	-1.4
1,709,308	-		MIT1002_01556	0.29	-0.7
1,709,328	+		MIT1002_01556	0.30	-0.1
1,709,381	+		MIT1002_01556	0.35	-0.4
1,709,494	-		MIT1002_01556	0.46	-0.6
1,709,494	-		MIT1002_01556	0.46	+1.5
1,709,494	-		MIT1002_01556	0.46	-0.1
1,709,597	-		MIT1002_01556	0.55	+0.3
1,709,609	-		MIT1002_01556	0.56	+0.8
1,709,668	-		MIT1002_01556	0.62	-0.8
1,709,727	-		MIT1002_01556	0.67	-0.3
1,709,754	+		MIT1002_01556	0.70	+0.3
1,709,757	-		MIT1002_01556	0.70	-2.3
1,709,760	+		MIT1002_01556	0.70	-3.0
1,709,766	+		MIT1002_01556	0.71	-0.1
1,709,817	+		MIT1002_01556	0.76	-2.6
1,709,817	+		MIT1002_01556	0.76	+1.7
1,709,817	+		MIT1002_01556	0.76	-0.7
1,709,825	-		MIT1002_01556	0.77	+0.2
1,709,825	-		MIT1002_01556	0.77	-2.4
1,709,851	+		MIT1002_01556	0.79	+0.8
1,709,942	-		MIT1002_01556	0.87	+0.1
1,710,008	-				-0.2
1,710,034	+				-0.1
1,710,048	+				+0.4
1,710,056	-				-0.6
1,710,159	+				+0.3
1,710,209	+				-2.6
1,710,352	+				-0.6
1,710,364	+				+0.3
1,710,372	-				+0.9
1,710,488	+				+0.5
1,710,488	+				-1.8
1,710,510	-				+0.7
1,710,609	+				-1.8
1,710,614	+				+0.4
1,710,616	+				-1.4
1,710,616	+				-0.5
1,710,622	-				-0.6
1,710,623	-				-0.3
1,710,681	-				-0.1
1,710,690	+		MIT1002_01558	0.10	+0.4
1,710,691	-		MIT1002_01558	0.11	+0.5
1,710,771	+		MIT1002_01558	0.15	-2.6
1,710,790	-		MIT1002_01558	0.16	-2.1
1,710,837	-		MIT1002_01558	0.19	+1.0
1,710,868	+		MIT1002_01558	0.21	-1.2
1,710,917	+		MIT1002_01558	0.24	-0.7