Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01375

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 1
1,525,154	+		MIT1002_01374	0.37	+0.8
1,525,172	-		MIT1002_01374	0.39	+0.4
1,525,172	-		MIT1002_01374	0.39	+0.7
1,525,208	-		MIT1002_01374	0.41	-0.5
1,525,220	+		MIT1002_01374	0.42	-0.2
1,525,220	+		MIT1002_01374	0.42	+0.2
1,525,220	+		MIT1002_01374	0.42	-3.7
1,525,220	+		MIT1002_01374	0.42	+0.7
1,525,220	+		MIT1002_01374	0.42	-0.6
1,525,220	+		MIT1002_01374	0.42	-2.2
1,525,228	-		MIT1002_01374	0.42	+0.0
1,525,228	-		MIT1002_01374	0.42	+0.7
1,525,228	-		MIT1002_01374	0.42	+0.4
1,525,228	-		MIT1002_01374	0.42	+1.6
1,525,228	-		MIT1002_01374	0.42	-1.1
1,525,228	-		MIT1002_01374	0.42	-0.9
1,525,228	-		MIT1002_01374	0.42	-0.2
1,525,228	-		MIT1002_01374	0.42	-0.4
1,525,228	-		MIT1002_01374	0.42	-0.5
1,525,228	-		MIT1002_01374	0.42	-0.4
1,525,228	-		MIT1002_01374	0.42	+1.0
1,525,239	+		MIT1002_01374	0.43	-0.9
1,525,239	+		MIT1002_01374	0.43	+1.2
1,525,266	-		MIT1002_01374	0.45	+0.9
1,525,301	-		MIT1002_01374	0.47	-0.0
1,525,303	+		MIT1002_01374	0.47	+0.1
1,525,303	+		MIT1002_01374	0.47	+1.7
1,525,303	+		MIT1002_01374	0.47	+1.6
1,525,303	+		MIT1002_01374	0.47	+0.5
1,525,303	+		MIT1002_01374	0.47	-0.8
1,525,303	+		MIT1002_01374	0.47	+0.7
1,525,303	+		MIT1002_01374	0.47	+0.2
1,525,311	-		MIT1002_01374	0.48	-0.1
1,525,311	-		MIT1002_01374	0.48	+1.1
1,525,311	-		MIT1002_01374	0.48	-1.4
1,525,311	-		MIT1002_01374	0.48	+0.7
1,525,321	-		MIT1002_01374	0.49	+0.1
1,525,336	+		MIT1002_01374	0.50	+0.6
1,525,356	-		MIT1002_01374	0.51	-1.3
1,525,411	-		MIT1002_01374	0.55	-0.6
1,525,626	+		MIT1002_01374	0.69	-1.3
1,525,674	-		MIT1002_01374	0.72	-2.5
1,525,775	+		MIT1002_01374	0.79	+0.2
1,525,775	+		MIT1002_01374	0.79	-1.4
1,525,775	+		MIT1002_01374	0.79	+0.8
1,525,775	+		MIT1002_01374	0.79	-0.7
1,525,775	+		MIT1002_01374	0.79	+0.6
1,525,783	-		MIT1002_01374	0.80	+0.7
1,525,809	+		MIT1002_01374	0.81	+2.0
1,525,856	+		MIT1002_01374	0.85	-0.9
1,525,991	-				+0.1
1,526,125	+				-0.3
1,526,163	-				-0.2
1,526,179	-				-2.8
1,526,216	+		MIT1002_01375	0.11	-3.5
1,526,216	+		MIT1002_01375	0.11	+0.5
1,526,216	+		MIT1002_01375	0.11	-0.2
1,526,221	+		MIT1002_01375	0.11	+0.9
1,526,221	+		MIT1002_01375	0.11	-0.9
1,526,224	-		MIT1002_01375	0.11	+0.8
1,526,224	-		MIT1002_01375	0.11	+0.6
1,526,224	-		MIT1002_01375	0.11	-0.2
1,526,224	-		MIT1002_01375	0.11	+1.2
1,526,226	+		MIT1002_01375	0.11	+0.9
1,526,262	+		MIT1002_01375	0.14	-0.1
1,526,270	-		MIT1002_01375	0.15	+0.2
1,526,370	-		MIT1002_01375	0.23	-0.6
1,526,370	-		MIT1002_01375	0.23	+1.0
1,526,391	-		MIT1002_01375	0.24	+0.8
1,526,460	-		MIT1002_01375	0.30	+0.5
1,526,495	-		MIT1002_01375	0.32	-0.1
1,526,536	+		MIT1002_01375	0.36	+0.8
1,526,536	+		MIT1002_01375	0.36	-0.9
1,526,544	-		MIT1002_01375	0.36	-0.2
1,526,544	-		MIT1002_01375	0.36	-0.5
1,526,669	+		MIT1002_01375	0.46	+1.3
1,526,683	-		MIT1002_01375	0.47	-0.7
1,526,725	+		MIT1002_01375	0.50	+1.4
1,526,725	+		MIT1002_01375	0.50	+1.0
1,526,733	-		MIT1002_01375	0.51	-1.5
1,526,781	+		MIT1002_01375	0.55	+0.8
1,526,789	-		MIT1002_01375	0.55	+0.9
1,526,833	+		MIT1002_01375	0.59	-0.5
1,526,916	-		MIT1002_01375	0.65	+2.0
1,527,035	+		MIT1002_01375	0.75	-0.7
1,527,129	+		MIT1002_01375	0.82	-1.4
1,527,129	+		MIT1002_01375	0.82	+0.0
1,527,137	-		MIT1002_01375	0.83	+0.2
1,527,181	+		MIT1002_01375	0.86	-0.1
1,527,226	+		MIT1002_01375	0.90	-1.6
1,527,234	-				-0.1
1,527,234	-				-0.2
1,527,250	+				+0.5
1,527,297	-				+0.9
1,527,373	+				+0.6
1,527,373	+				-0.8
1,527,373	+				-2.4
1,527,381	-				+0.6
1,527,400	-				+0.6
1,527,509	-				-0.0
1,527,667	-		MIT1002_01376	0.66	+0.4
1,527,685	+		MIT1002_01376	0.72	+1.0
1,527,857	+				-0.3
1,527,857	+				+0.8
1,527,859	+				+0.2
1,527,918	+				-0.0
1,527,918	+				-0.5
1,527,936	-				+0.7
1,527,946	-				+0.6
1,527,985	-				-2.5
1,528,066	-				+0.7
1,528,099	-				+0.2
1,528,154	-				+1.4
1,528,154	-				-2.9
1,528,167	-				+0.4
1,528,217	+				+0.9
1,528,262	-				-0.6
1,528,356	+		MIT1002_01377	0.24	+0.3