Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01355

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 1
1,498,743	+		MIT1002_01354	0.39	-0.3
1,498,822	+		MIT1002_01354	0.44	-1.0
1,498,856	+		MIT1002_01354	0.47	+2.5
1,498,882	+		MIT1002_01354	0.48	+0.1
1,498,894	+		MIT1002_01354	0.49	-0.2
1,498,966	-		MIT1002_01354	0.53	-0.6
1,498,968	+		MIT1002_01354	0.54	-0.2
1,499,120	+		MIT1002_01354	0.63	-0.0
1,499,163	+		MIT1002_01354	0.66	+1.9
1,499,175	+		MIT1002_01354	0.66	+3.4
1,499,191	+		MIT1002_01354	0.67	-0.7
1,499,191	+		MIT1002_01354	0.67	+1.3
1,499,197	-		MIT1002_01354	0.68	+0.2
1,499,199	-		MIT1002_01354	0.68	+0.3
1,499,225	-		MIT1002_01354	0.70	+0.4
1,499,328	+		MIT1002_01354	0.76	+1.0
1,499,336	-		MIT1002_01354	0.77	+0.1
1,499,358	-		MIT1002_01354	0.78	+0.7
1,499,368	-		MIT1002_01354	0.79	+0.6
1,499,694	-				-0.8
1,499,708	-				-2.6
1,499,715	+				+0.9
1,499,723	-				-0.8
1,499,724	-				-2.9
1,499,758	-		MIT1002_01355	0.12	-0.6
1,499,760	+		MIT1002_01355	0.13	+0.1
1,499,760	+		MIT1002_01355	0.13	-0.7
1,499,760	+		MIT1002_01355	0.13	+0.5
1,499,760	+		MIT1002_01355	0.13	-0.4
1,499,760	+		MIT1002_01355	0.13	-1.2
1,499,760	+		MIT1002_01355	0.13	-0.5
1,499,760	+		MIT1002_01355	0.13	-1.1
1,499,768	-		MIT1002_01355	0.15	-1.1
1,499,768	-		MIT1002_01355	0.15	-1.2
1,499,768	-		MIT1002_01355	0.15	-0.1
1,499,768	-		MIT1002_01355	0.15	-0.1
1,499,768	-		MIT1002_01355	0.15	-0.7
1,499,768	-		MIT1002_01355	0.15	-0.5
1,499,768	-		MIT1002_01355	0.15	+0.6
1,499,768	-		MIT1002_01355	0.15	-0.6
1,499,768	-		MIT1002_01355	0.15	-0.2
1,499,768	-		MIT1002_01355	0.15	+1.5
1,499,768	-		MIT1002_01355	0.15	-0.2
1,499,835	-		MIT1002_01355	0.30	+0.9
1,499,890	-		MIT1002_01355	0.42	-0.2
1,499,947	+		MIT1002_01355	0.55	+0.2
1,499,974	+		MIT1002_01355	0.61	-0.2
1,499,994	-		MIT1002_01355	0.66	-1.3
1,500,031	-		MIT1002_01355	0.74	-0.7
1,500,096	-		MIT1002_01355	0.89	+0.0
1,500,102	+				-0.2
1,500,122	-				+0.4
1,500,129	-				-1.0
1,500,234	+				-0.5
1,500,234	-				+0.2
1,500,316	-		MIT1002_01356	0.13	-0.0
1,500,352	-		MIT1002_01356	0.16	-1.8
1,500,391	+		MIT1002_01356	0.19	+0.2
1,500,457	-		MIT1002_01356	0.24	+1.5
1,500,484	+		MIT1002_01356	0.26	-0.3
1,500,492	-		MIT1002_01356	0.27	+0.3
1,500,493	-		MIT1002_01356	0.27	-2.0
1,500,558	-		MIT1002_01356	0.32	+0.2
1,500,558	-		MIT1002_01356	0.32	+0.4
1,500,654	+		MIT1002_01356	0.40	-0.5
1,500,662	-		MIT1002_01356	0.41	+0.0
1,500,676	+		MIT1002_01356	0.42	-0.6
1,500,684	-		MIT1002_01356	0.42	-0.1
1,500,755	+		MIT1002_01356	0.48	+0.4
1,500,899	+		MIT1002_01356	0.60	+0.5
1,500,907	-		MIT1002_01356	0.60	-0.6
1,500,917	-		MIT1002_01356	0.61	+0.4
1,500,941	+		MIT1002_01356	0.63	+0.5
1,500,974	+		MIT1002_01356	0.66	+0.5
1,501,036	+		MIT1002_01356	0.71	-1.7
1,501,069	-		MIT1002_01356	0.73	-0.9