Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01198

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment C, time point 1
1,314,442	-		MIT1002_01197	0.61	+0.0
1,314,457	+		MIT1002_01197	0.61	+0.6
1,314,470	+		MIT1002_01197	0.62	+0.0
1,314,592	-		MIT1002_01197	0.69	-0.1
1,314,628	+		MIT1002_01197	0.71	-0.2
1,314,640	-		MIT1002_01197	0.71	-0.4
1,314,642	+		MIT1002_01197	0.71	-0.5
1,314,650	-		MIT1002_01197	0.72	+0.8
1,314,705	-		MIT1002_01197	0.75	+1.5
1,314,777	-		MIT1002_01197	0.79	-4.1
1,314,789	-		MIT1002_01197	0.79	-0.7
1,314,789	-		MIT1002_01197	0.79	-1.4
1,314,880	+		MIT1002_01197	0.84	+1.2
1,314,885	-		MIT1002_01197	0.84	+0.4
1,314,890	+		MIT1002_01197	0.85	+1.2
1,314,895	+		MIT1002_01197	0.85	+0.0
1,314,908	+		MIT1002_01197	0.86	-0.3
1,315,031	+				+0.1
1,315,151	-				-0.5
1,315,193	-				-0.1
1,315,210	+				-0.8
1,315,218	-				-2.8
1,315,402	-				-0.5
1,315,407	-				+0.1
1,315,441	+				-0.8
1,315,449	-				-2.0
1,315,643	+		MIT1002_01198	0.36	+1.0
1,315,769	-		MIT1002_01198	0.56	-0.1
1,315,776	+		MIT1002_01198	0.57	+2.2
1,315,787	+		MIT1002_01198	0.58	+0.5
1,315,838	+		MIT1002_01198	0.67	-1.8
1,315,846	-		MIT1002_01198	0.68	-0.1
1,315,851	-		MIT1002_01198	0.69	+0.0
1,315,853	-		MIT1002_01198	0.69	-0.6
1,315,868	-		MIT1002_01198	0.71	-2.2
1,315,935	-		MIT1002_01198	0.82	+2.2
1,315,961	+		MIT1002_01198	0.86	+0.7
1,315,961	+		MIT1002_01198	0.86	-0.8
1,315,969	-		MIT1002_01198	0.87	+1.2
1,315,969	-		MIT1002_01198	0.87	+0.7
1,315,986	+		MIT1002_01198	0.90	+0.4
1,316,175	+				-0.1
1,316,198	+				-1.0
1,316,341	-				+0.3
1,316,452	-				+0.1
1,316,499	-				-0.6
1,316,596	-				+0.5
1,316,601	-				-0.1
1,316,718	+				-0.5
1,316,839	+				-0.5
1,316,985	+		MIT1002_01199	0.13	-1.0
1,316,985	-		MIT1002_01199	0.13	-2.5
1,316,988	+		MIT1002_01199	0.13	+0.3
1,317,036	-		MIT1002_01199	0.14	+0.2
1,317,036	-		MIT1002_01199	0.14	+0.7
1,317,041	-		MIT1002_01199	0.14	+0.7