Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS10580

Experiment: planktonic; Day2; NLDM; Aluminum chloride 1mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day2; NLDM; Aluminum chloride 1mM
2,363,138	-		LRK53_RS10575	0.54	-1.6
2,363,138	-		LRK53_RS10575	0.54	-1.0
2,363,138	-		LRK53_RS10575	0.54	-0.7
2,363,138	-		LRK53_RS10575	0.54	-1.0
2,363,180	+		LRK53_RS10575	0.56	+0.7
2,363,180	+		LRK53_RS10575	0.56	-2.1
2,363,180	+		LRK53_RS10575	0.56	-0.8
2,363,180	+		LRK53_RS10575	0.56	-0.2
2,363,180	+		LRK53_RS10575	0.56	+0.2
2,363,180	+		LRK53_RS10575	0.56	-0.6
2,363,180	+		LRK53_RS10575	0.56	-0.4
2,363,180	+		LRK53_RS10575	0.56	-1.7
2,363,180	+		LRK53_RS10575	0.56	-1.1
2,363,180	+		LRK53_RS10575	0.56	-1.6
2,363,180	+		LRK53_RS10575	0.56	-1.0
2,363,180	+		LRK53_RS10575	0.56	-1.4
2,363,180	+		LRK53_RS10575	0.56	-2.5
2,363,180	+		LRK53_RS10575	0.56	+0.0
2,363,180	+		LRK53_RS10575	0.56	+0.9
2,363,180	+		LRK53_RS10575	0.56	-1.0
2,363,180	+		LRK53_RS10575	0.56	+0.3
2,363,180	+		LRK53_RS10575	0.56	-1.1
2,363,180	+		LRK53_RS10575	0.56	+0.1
2,363,180	+		LRK53_RS10575	0.56	+1.1
2,363,180	+		LRK53_RS10575	0.56	-3.3
2,363,180	+		LRK53_RS10575	0.56	-2.5
2,363,180	+		LRK53_RS10575	0.56	+0.2
2,363,180	+		LRK53_RS10575	0.56	+1.6
2,363,180	+		LRK53_RS10575	0.56	+0.6
2,363,180	+		LRK53_RS10575	0.56	-1.1
2,363,180	+		LRK53_RS10575	0.56	-1.2
2,363,180	+		LRK53_RS10575	0.56	-1.4
2,363,180	+		LRK53_RS10575	0.56	-0.2
2,363,180	+		LRK53_RS10575	0.56	-1.8
2,363,180	+		LRK53_RS10575	0.56	+0.8
2,363,180	+		LRK53_RS10575	0.56	-3.2
2,363,181	-		LRK53_RS10575	0.56	-1.0
2,363,181	-		LRK53_RS10575	0.56	-0.6
2,363,181	-		LRK53_RS10575	0.56	-1.7
2,363,181	-		LRK53_RS10575	0.56	-1.4
2,363,181	-		LRK53_RS10575	0.56	+0.5
2,363,181	-		LRK53_RS10575	0.56	-0.1
2,363,181	-		LRK53_RS10575	0.56	-1.3
2,363,181	-		LRK53_RS10575	0.56	-1.4
2,363,181	-		LRK53_RS10575	0.56	-1.1
2,363,181	-		LRK53_RS10575	0.56	-0.4
2,363,181	-		LRK53_RS10575	0.56	-0.7
2,363,181	-		LRK53_RS10575	0.56	-1.5
2,363,181	-		LRK53_RS10575	0.56	-3.6
2,363,181	-		LRK53_RS10575	0.56	-0.3
2,363,181	-		LRK53_RS10575	0.56	-1.2
2,363,181	-		LRK53_RS10575	0.56	+0.6
2,363,181	-		LRK53_RS10575	0.56	-2.7
2,363,181	-		LRK53_RS10575	0.56	-1.1
2,363,181	-		LRK53_RS10575	0.56	+0.1
2,363,181	-		LRK53_RS10575	0.56	-1.7
2,363,181	-		LRK53_RS10575	0.56	-0.0
2,363,181	-		LRK53_RS10575	0.56	-2.0
2,363,181	-		LRK53_RS10575	0.56	-0.8
2,363,181	-		LRK53_RS10575	0.56	-0.5
2,363,181	-		LRK53_RS10575	0.56	-1.2
2,363,296	+		LRK53_RS10575	0.63	-2.3
2,363,296	+		LRK53_RS10575	0.63	+0.2
2,363,296	+		LRK53_RS10575	0.63	-1.2
2,363,296	+		LRK53_RS10575	0.63	-0.2
2,363,296	+		LRK53_RS10575	0.63	+1.2
2,363,296	+		LRK53_RS10575	0.63	+0.6
2,363,296	+		LRK53_RS10575	0.63	+0.0
2,363,296	+		LRK53_RS10575	0.63	+0.4
2,363,296	+		LRK53_RS10575	0.63	-2.4
2,363,297	-		LRK53_RS10575	0.63	-1.1
2,363,297	-		LRK53_RS10575	0.63	-1.4
2,363,297	-		LRK53_RS10575	0.63	+2.4
2,363,297	-		LRK53_RS10575	0.63	-0.2
2,363,297	-		LRK53_RS10575	0.63	-1.5
2,363,297	-		LRK53_RS10575	0.63	-1.8
2,363,298	+		LRK53_RS10575	0.63	-0.3
2,363,298	+		LRK53_RS10575	0.63	+0.8
2,363,298	+		LRK53_RS10575	0.63	-0.9
2,363,298	+		LRK53_RS10575	0.63	-1.6
2,363,298	+		LRK53_RS10575	0.63	+2.9
2,363,298	+		LRK53_RS10575	0.63	-1.1
2,363,298	+		LRK53_RS10575	0.63	+0.8
2,363,298	+		LRK53_RS10575	0.63	-0.7
2,363,298	+		LRK53_RS10575	0.63	+1.4
2,363,298	+		LRK53_RS10575	0.63	-2.9
2,363,299	-		LRK53_RS10575	0.63	-0.4
2,363,299	-		LRK53_RS10575	0.63	-1.2
2,363,299	-		LRK53_RS10575	0.63	-2.0
2,363,299	-		LRK53_RS10575	0.63	+0.5
2,363,299	-		LRK53_RS10575	0.63	+0.7
2,363,299	-		LRK53_RS10575	0.63	-0.8
2,363,299	-		LRK53_RS10575	0.63	-1.2
2,363,299	-		LRK53_RS10575	0.63	+2.1
2,363,299	-		LRK53_RS10575	0.63	-0.8
2,363,451	+		LRK53_RS10575	0.73	+0.6
2,363,451	+		LRK53_RS10575	0.73	-1.1
2,363,451	+		LRK53_RS10575	0.73	-2.1
2,363,460	+		LRK53_RS10575	0.73	-0.3
2,363,460	+		LRK53_RS10575	0.73	-1.1
2,363,460	+		LRK53_RS10575	0.73	+0.6
2,363,460	+		LRK53_RS10575	0.73	-0.1
2,363,460	+		LRK53_RS10575	0.73	-0.6
2,363,460	+		LRK53_RS10575	0.73	-2.1
2,363,460	+		LRK53_RS10575	0.73	-0.9
2,363,461	-		LRK53_RS10575	0.73	-2.7
2,363,461	-		LRK53_RS10575	0.73	-0.6
2,363,461	-		LRK53_RS10575	0.73	-1.0
2,363,461	-		LRK53_RS10575	0.73	-0.8
2,363,461	-		LRK53_RS10575	0.73	-0.6
2,363,461	-		LRK53_RS10575	0.73	-0.1
2,363,643	+		LRK53_RS10575	0.84	+0.3
2,363,644	-		LRK53_RS10575	0.84	-1.2
2,363,676	+		LRK53_RS10575	0.86	-0.4
2,363,676	+		LRK53_RS10575	0.86	-1.9
2,363,676	+		LRK53_RS10575	0.86	+2.2
2,363,676	+		LRK53_RS10575	0.86	-1.7
2,363,676	+		LRK53_RS10575	0.86	-1.3
2,363,677	-		LRK53_RS10575	0.86	-0.8
2,363,760	+				+0.5
2,363,760	+				-0.4
2,363,760	+				+1.6
2,363,760	+				-0.2
2,363,760	+				+1.1
2,363,761	-				-1.1
2,363,761	-				+0.4
2,363,761	-				-2.2
2,363,761	-				+0.4
2,363,761	-				+0.4
2,363,761	-				-0.8
2,363,761	-				-0.6
2,363,761	-				-1.1
2,363,778	+				+0.2
2,363,778	+				-0.1
2,363,778	+				+0.0
2,363,778	+				+0.3
2,363,778	+				-2.2
2,363,778	+				+2.4
2,363,778	+				-0.2
2,363,778	+				-0.8
2,363,779	-				-1.7
2,363,779	-				-2.8
2,363,779	-				-0.7
2,363,779	-				-0.7
2,363,779	-				-1.4
2,363,779	-				-1.3
2,363,781	+				-0.1
2,363,781	+				-1.0
2,363,781	+				+2.9
2,363,781	+				+0.1
2,363,832	+				-1.8
2,363,832	+				-0.5
2,363,832	+				-1.5
2,363,832	+				-1.8
2,363,832	+				-0.0
2,363,832	+				-0.5
2,363,832	+				-0.6
2,363,832	+				-2.6
2,363,832	+				+0.4
2,363,832	+				-2.2
2,363,832	+				-0.2
2,363,833	-				+0.0
2,363,833	-				-1.6
2,363,833	-				-1.3
2,363,833	-				+1.0
2,363,833	-				-0.9
2,363,833	-				+0.6
2,363,833	-				-1.8
2,363,833	-				-1.2
2,363,833	-				-2.0
2,363,833	-				-1.6
2,363,833	-				-0.4
2,363,833	-				+0.6
2,363,833	-				+1.0
2,363,835	+				+0.7
2,363,835	+				-1.1
2,363,835	+				-1.1
2,363,836	-				+1.9
2,363,836	-				+1.4
2,363,836	-				-0.1
2,363,836	-				-0.6
2,363,836	-				-1.1
2,363,836	-				-0.6
2,363,836	-				-0.4
2,363,836	-				+1.8
2,363,836	-				-2.0
2,363,836	-				-3.2
2,363,836	-				+0.9
2,363,953	-				-0.8
2,364,093	+		LRK53_RS10580	0.20	-0.2
2,364,093	+		LRK53_RS10580	0.20	-0.7
2,364,093	+		LRK53_RS10580	0.20	-1.0
2,364,093	+		LRK53_RS10580	0.20	-1.2
2,364,093	+		LRK53_RS10580	0.20	-1.4
2,364,094	-		LRK53_RS10580	0.20	-0.6
2,364,094	-		LRK53_RS10580	0.20	-0.9
2,364,094	-		LRK53_RS10580	0.20	-1.0
2,364,094	-		LRK53_RS10580	0.20	-3.3
2,364,094	-		LRK53_RS10580	0.20	-1.1
2,364,094	-		LRK53_RS10580	0.20	+0.2
2,364,094	-		LRK53_RS10580	0.20	+1.0
2,364,135	+		LRK53_RS10580	0.25	+1.4
2,364,135	+		LRK53_RS10580	0.25	-0.3
2,364,135	+		LRK53_RS10580	0.25	+1.7
2,364,135	+		LRK53_RS10580	0.25	-1.0
2,364,135	+		LRK53_RS10580	0.25	-0.6
2,364,135	+		LRK53_RS10580	0.25	-1.2
2,364,135	+		LRK53_RS10580	0.25	-1.0
2,364,135	+		LRK53_RS10580	0.25	-0.9
2,364,136	-		LRK53_RS10580	0.26	-0.4
2,364,136	-		LRK53_RS10580	0.26	+0.0
2,364,136	-		LRK53_RS10580	0.26	-0.2
2,364,136	-		LRK53_RS10580	0.26	-1.1
2,364,136	-		LRK53_RS10580	0.26	-0.4
2,364,136	-		LRK53_RS10580	0.26	-0.8
2,364,136	-		LRK53_RS10580	0.26	-1.0
2,364,136	-		LRK53_RS10580	0.26	-0.5
2,364,144	+		LRK53_RS10580	0.26	-1.4
2,364,145	-		LRK53_RS10580	0.27	+0.4
2,364,145	-		LRK53_RS10580	0.27	-0.8
2,364,145	-		LRK53_RS10580	0.27	-2.0
2,364,145	-		LRK53_RS10580	0.27	-0.1
2,364,145	-		LRK53_RS10580	0.27	-2.0
2,364,145	-		LRK53_RS10580	0.27	+0.2
2,364,145	-		LRK53_RS10580	0.27	-0.0
2,364,145	-		LRK53_RS10580	0.27	-0.1
2,364,145	-		LRK53_RS10580	0.27	-0.8
2,364,344	+		LRK53_RS10580	0.51	+0.2
2,364,345	-		LRK53_RS10580	0.51	-0.2
2,364,345	-		LRK53_RS10580	0.51	+0.8
2,364,345	-		LRK53_RS10580	0.51	-2.6
2,364,345	-		LRK53_RS10580	0.51	+0.0
2,364,345	-		LRK53_RS10580	0.51	-1.5
2,364,350	+		LRK53_RS10580	0.52	-1.4
2,364,350	+		LRK53_RS10580	0.52	-1.3
2,364,350	+		LRK53_RS10580	0.52	+0.9
2,364,350	+		LRK53_RS10580	0.52	+0.6
2,364,350	+		LRK53_RS10580	0.52	+1.4
2,364,350	+		LRK53_RS10580	0.52	-0.6
2,364,350	+		LRK53_RS10580	0.52	+0.0
2,364,350	+		LRK53_RS10580	0.52	-1.2
2,364,350	+		LRK53_RS10580	0.52	-1.0
2,364,350	+		LRK53_RS10580	0.52	+0.9
2,364,351	-		LRK53_RS10580	0.52	-1.3
2,364,351	-		LRK53_RS10580	0.52	-1.4
2,364,351	-		LRK53_RS10580	0.52	+0.6
2,364,351	-		LRK53_RS10580	0.52	+0.3
2,364,351	-		LRK53_RS10580	0.52	+0.7
2,364,351	-		LRK53_RS10580	0.52	-2.3
2,364,351	-		LRK53_RS10580	0.52	-1.3
2,364,351	-		LRK53_RS10580	0.52	-1.0
2,364,351	-		LRK53_RS10580	0.52	-2.0
2,364,351	-		LRK53_RS10580	0.52	-1.7
2,364,351	-		LRK53_RS10580	0.52	-0.6
2,364,351	-		LRK53_RS10580	0.52	-0.1
2,364,351	-		LRK53_RS10580	0.52	-1.0
2,364,405	+		LRK53_RS10580	0.58	-0.7
2,364,405	+		LRK53_RS10580	0.58	-0.9
2,364,405	+		LRK53_RS10580	0.58	+0.2
2,364,405	+		LRK53_RS10580	0.58	-2.3
2,364,405	+		LRK53_RS10580	0.58	-0.4
2,364,406	-		LRK53_RS10580	0.58	-1.2
2,364,406	-		LRK53_RS10580	0.58	-0.5
2,364,406	-		LRK53_RS10580	0.58	-1.2
2,364,406	-		LRK53_RS10580	0.58	-0.3
2,364,406	-		LRK53_RS10580	0.58	-0.4
2,364,406	-		LRK53_RS10580	0.58	-2.0
2,364,406	-		LRK53_RS10580	0.58	-1.6
2,364,406	-		LRK53_RS10580	0.58	-0.2
2,364,406	-		LRK53_RS10580	0.58	-0.5
2,364,505	-		LRK53_RS10580	0.71	-2.1
2,364,505	-		LRK53_RS10580	0.71	-1.2
2,364,526	-		LRK53_RS10580	0.73	+0.4
2,364,526	-		LRK53_RS10580	0.73	-2.0
2,364,534	+		LRK53_RS10580	0.74	-1.8
2,364,592	+		LRK53_RS10580	0.81	+0.4
2,364,592	+		LRK53_RS10580	0.81	-0.4
2,364,592	+		LRK53_RS10580	0.81	-1.3
2,364,593	-		LRK53_RS10580	0.81	-1.1
2,364,593	-		LRK53_RS10580	0.81	-0.4
2,364,621	+		LRK53_RS10580	0.85	-1.2
2,364,621	+		LRK53_RS10580	0.85	+0.8
2,364,621	+		LRK53_RS10580	0.85	+0.5
2,364,621	+		LRK53_RS10580	0.85	-1.8
2,364,621	+		LRK53_RS10580	0.85	-0.2
2,364,621	+		LRK53_RS10580	0.85	-0.6
2,364,621	+		LRK53_RS10580	0.85	-2.8
2,364,622	-		LRK53_RS10580	0.85	-0.3
2,364,622	-		LRK53_RS10580	0.85	-0.4
2,364,622	-		LRK53_RS10580	0.85	-0.5
2,364,622	-		LRK53_RS10580	0.85	-0.9
2,364,622	-		LRK53_RS10580	0.85	-2.6
2,364,740	-				-0.4
2,364,791	+				-0.7
2,364,791	+				-1.9
2,364,791	+				+0.2
2,364,791	+				+1.1
2,364,791	+				+0.3
2,364,792	-				-2.1
2,364,792	-				-1.4
2,364,792	-				-0.2
2,364,792	-				-1.2
2,364,876	-		LRK53_RS10585	0.25	-0.6
2,364,876	-		LRK53_RS10585	0.25	-0.6
2,364,876	-		LRK53_RS10585	0.25	+0.6
2,364,876	-		LRK53_RS10585	0.25	-0.2
2,364,876	-		LRK53_RS10585	0.25	-2.1
2,364,876	-		LRK53_RS10585	0.25	-1.2
2,364,876	-		LRK53_RS10585	0.25	+2.0
2,364,876	-		LRK53_RS10585	0.25	-0.4
2,364,876	-		LRK53_RS10585	0.25	-0.4
2,364,876	-		LRK53_RS10585	0.25	-1.3
2,364,876	-		LRK53_RS10585	0.25	-1.2
2,364,876	-		LRK53_RS10585	0.25	-1.2
2,364,876	-		LRK53_RS10585	0.25	-0.3
2,364,876	-		LRK53_RS10585	0.25	-0.4
2,364,876	-		LRK53_RS10585	0.25	+1.4
2,364,876	-		LRK53_RS10585	0.25	-1.5
2,364,940	+		LRK53_RS10585	0.39	-1.1
2,364,940	+		LRK53_RS10585	0.39	+1.4
2,364,940	+		LRK53_RS10585	0.39	-1.5
2,364,940	+		LRK53_RS10585	0.39	-0.2
2,364,940	+		LRK53_RS10585	0.39	-0.5
2,364,941	-		LRK53_RS10585	0.40	-1.2
2,364,941	-		LRK53_RS10585	0.40	-2.5
2,364,941	-		LRK53_RS10585	0.40	-1.5
2,364,941	-		LRK53_RS10585	0.40	-1.1
2,364,941	-		LRK53_RS10585	0.40	-0.5
2,364,941	-		LRK53_RS10585	0.40	-1.5
2,364,941	-		LRK53_RS10585	0.40	-1.5
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2,365,024	+		LRK53_RS10585	0.58	-2.1
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2,365,563	-		LRK53_RS10590	0.29	-2.3
2,365,627	-		LRK53_RS10590	0.39	-2.9