Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS08280

Experiment: planktonic; Day2; NLDM; Aluminum chloride 1mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day2; NLDM; Aluminum chloride 1mM
1,860,764	+		LRK53_RS08275	0.52	-1.8
1,860,764	+		LRK53_RS08275	0.52	-1.8
1,860,764	+		LRK53_RS08275	0.52	-1.4
1,860,764	+		LRK53_RS08275	0.52	-1.5
1,860,764	+		LRK53_RS08275	0.52	+0.4
1,860,764	+		LRK53_RS08275	0.52	-1.6
1,860,764	+		LRK53_RS08275	0.52	-1.0
1,860,765	-		LRK53_RS08275	0.52	-0.5
1,860,765	-		LRK53_RS08275	0.52	-1.0
1,860,765	-		LRK53_RS08275	0.52	-0.8
1,860,765	-		LRK53_RS08275	0.52	-0.2
1,860,765	-		LRK53_RS08275	0.52	-2.2
1,860,765	-		LRK53_RS08275	0.52	-0.5
1,860,765	-		LRK53_RS08275	0.52	-1.0
1,860,765	-		LRK53_RS08275	0.52	-0.0
1,860,765	-		LRK53_RS08275	0.52	-0.6
1,860,765	-		LRK53_RS08275	0.52	+0.8
1,860,770	+		LRK53_RS08275	0.53	-1.8
1,860,770	+		LRK53_RS08275	0.53	-1.4
1,860,771	-		LRK53_RS08275	0.53	+0.8
1,860,771	-		LRK53_RS08275	0.53	-1.6
1,860,771	-		LRK53_RS08275	0.53	-0.7
1,860,881	+		LRK53_RS08275	0.62	+2.2
1,860,881	+		LRK53_RS08275	0.62	-0.8
1,860,881	+		LRK53_RS08275	0.62	-1.3
1,860,881	+		LRK53_RS08275	0.62	+1.5
1,860,881	+		LRK53_RS08275	0.62	-1.5
1,860,882	-		LRK53_RS08275	0.62	+0.0
1,860,882	-		LRK53_RS08275	0.62	-0.1
1,860,882	-		LRK53_RS08275	0.62	-1.3
1,860,882	-		LRK53_RS08275	0.62	+0.4
1,860,882	-		LRK53_RS08275	0.62	-1.5
1,860,882	-		LRK53_RS08275	0.62	-0.8
1,860,882	-		LRK53_RS08275	0.62	-1.2
1,860,882	-		LRK53_RS08275	0.62	-0.4
1,861,238	+				-0.5
1,861,238	+				-1.0
1,861,238	+				-1.1
1,861,239	-				+0.3
1,861,239	-				+1.4
1,861,239	-				-0.7
1,861,239	-				-2.5
1,861,239	-				+0.7
1,861,411	+				-0.5
1,861,411	+				-0.6
1,861,411	+				-0.4
1,861,604	+				-0.5
1,861,604	+				-0.3
1,861,605	-				-0.3
1,861,903	+		LRK53_RS08280	0.18	-1.3
1,861,903	+		LRK53_RS08280	0.18	-1.0
1,861,903	+		LRK53_RS08280	0.18	-2.2
1,861,903	+		LRK53_RS08280	0.18	-0.9
1,861,903	+		LRK53_RS08280	0.18	-1.9
1,861,904	-		LRK53_RS08280	0.18	-1.5
1,861,904	-		LRK53_RS08280	0.18	-0.3
1,861,904	-		LRK53_RS08280	0.18	-0.5
1,861,904	-		LRK53_RS08280	0.18	-0.1
1,861,904	-		LRK53_RS08280	0.18	-0.7
1,862,014	-		LRK53_RS08280	0.26	-1.3
1,862,014	-		LRK53_RS08280	0.26	-0.5
1,862,034	-		LRK53_RS08280	0.27	-1.0
1,862,233	+		LRK53_RS08280	0.40	-2.3
1,862,233	+		LRK53_RS08280	0.40	-1.0
1,862,233	+		LRK53_RS08280	0.40	-0.4
1,862,233	+		LRK53_RS08280	0.40	-0.8
1,862,233	+		LRK53_RS08280	0.40	-0.6
1,862,233	+		LRK53_RS08280	0.40	+0.1
1,862,233	+		LRK53_RS08280	0.40	-1.3
1,862,234	-		LRK53_RS08280	0.40	-3.4
1,862,234	-		LRK53_RS08280	0.40	+0.2
1,862,234	-		LRK53_RS08280	0.40	-0.8
1,862,234	-		LRK53_RS08280	0.40	-2.3
1,862,234	-		LRK53_RS08280	0.40	-0.6
1,862,234	-		LRK53_RS08280	0.40	-1.7
1,862,234	-		LRK53_RS08280	0.40	-1.4
1,862,422	+		LRK53_RS08280	0.53	-0.4
1,862,422	+		LRK53_RS08280	0.53	-0.4
1,862,422	+		LRK53_RS08280	0.53	+0.7
1,862,422	+		LRK53_RS08280	0.53	+1.3
1,862,422	+		LRK53_RS08280	0.53	-2.0
1,862,423	-		LRK53_RS08280	0.53	-0.9
1,862,423	-		LRK53_RS08280	0.53	-0.5
1,862,423	-		LRK53_RS08280	0.53	-1.3
1,862,423	-		LRK53_RS08280	0.53	+0.2
1,862,423	-		LRK53_RS08280	0.53	-1.4
1,862,423	-		LRK53_RS08280	0.53	-1.3
1,862,611	+		LRK53_RS08280	0.66	-1.0
1,862,611	+		LRK53_RS08280	0.66	-0.8
1,862,611	+		LRK53_RS08280	0.66	-1.0
1,862,611	+		LRK53_RS08280	0.66	+0.1
1,862,611	+		LRK53_RS08280	0.66	-1.3
1,862,611	+		LRK53_RS08280	0.66	-2.3
1,862,611	+		LRK53_RS08280	0.66	-1.2
1,862,611	+		LRK53_RS08280	0.66	-0.9
1,862,611	+		LRK53_RS08280	0.66	-1.9
1,862,612	-		LRK53_RS08280	0.66	-2.7
1,862,612	-		LRK53_RS08280	0.66	-1.1
1,862,612	-		LRK53_RS08280	0.66	-3.0
1,862,612	-		LRK53_RS08280	0.66	-2.0
1,862,612	-		LRK53_RS08280	0.66	-1.5
1,862,612	-		LRK53_RS08280	0.66	-0.5
1,862,612	-		LRK53_RS08280	0.66	+0.5
1,862,612	-		LRK53_RS08280	0.66	-0.6
1,862,612	-		LRK53_RS08280	0.66	+1.5
1,862,612	-		LRK53_RS08280	0.66	+1.7
1,862,612	-		LRK53_RS08280	0.66	+1.4
1,862,612	-		LRK53_RS08280	0.66	+2.5
1,862,612	-		LRK53_RS08280	0.66	+0.1
1,862,612	-		LRK53_RS08280	0.66	+0.6
1,862,824	+		LRK53_RS08280	0.80	-0.3
1,862,824	+		LRK53_RS08280	0.80	-0.6
1,862,824	+		LRK53_RS08280	0.80	-0.9
1,862,824	+		LRK53_RS08280	0.80	-1.5
1,862,824	+		LRK53_RS08280	0.80	-0.8
1,862,824	+		LRK53_RS08280	0.80	+0.8
1,862,825	-		LRK53_RS08280	0.80	-0.8
1,862,825	-		LRK53_RS08280	0.80	+1.4
1,862,825	-		LRK53_RS08280	0.80	-1.2
1,862,825	-		LRK53_RS08280	0.80	+0.8
1,862,825	-		LRK53_RS08280	0.80	+0.7
1,863,067	+				-1.0
1,863,067	+				-2.4
1,863,157	+				-1.4
1,863,157	+				-0.8
1,863,157	+				+1.3
1,863,158	-				-1.9
1,863,158	-				+0.5
1,863,158	-				-1.5
1,863,158	-				-1.0
1,863,211	-				-1.3
1,863,266	+				-1.6
1,863,363	+				-1.5
1,863,363	+				-1.2
1,863,363	+				-1.3
1,863,363	+				-1.2
1,863,363	+				-0.4
1,863,363	+				+1.7
1,863,363	+				-1.0
1,863,363	+				-1.9
1,863,364	-				+0.4
1,863,364	-				-1.8
1,863,364	-				-0.3
1,863,393	+		LRK53_RS08285	0.10	-0.5
1,863,792	+		LRK53_RS08285	0.37	+0.1
1,863,792	+		LRK53_RS08285	0.37	+0.1
1,863,792	+		LRK53_RS08285	0.37	-1.6
1,863,792	+		LRK53_RS08285	0.37	+0.2
1,863,792	+		LRK53_RS08285	0.37	-0.6
1,863,792	+		LRK53_RS08285	0.37	-1.7
1,863,792	+		LRK53_RS08285	0.37	+2.0
1,863,792	+		LRK53_RS08285	0.37	-1.7
1,863,792	+		LRK53_RS08285	0.37	-1.6
1,863,792	+		LRK53_RS08285	0.37	-1.8
1,863,792	+		LRK53_RS08285	0.37	-0.8
1,863,792	+		LRK53_RS08285	0.37	-0.5
1,863,792	+		LRK53_RS08285	0.37	-1.9
1,863,793	-		LRK53_RS08285	0.37	-1.3
1,863,793	-		LRK53_RS08285	0.37	-0.5
1,863,793	-		LRK53_RS08285	0.37	+1.5
1,863,793	-		LRK53_RS08285	0.37	+0.0
1,863,793	-		LRK53_RS08285	0.37	-1.7
1,863,793	-		LRK53_RS08285	0.37	-0.8
1,863,793	-		LRK53_RS08285	0.37	-2.1
1,863,793	-		LRK53_RS08285	0.37	-0.8
1,863,793	-		LRK53_RS08285	0.37	-1.4
1,863,793	-		LRK53_RS08285	0.37	-1.0
1,863,793	-		LRK53_RS08285	0.37	-3.0
1,863,793	-		LRK53_RS08285	0.37	-1.0
1,863,793	-		LRK53_RS08285	0.37	-0.9
1,863,793	-		LRK53_RS08285	0.37	-1.3
1,863,793	-		LRK53_RS08285	0.37	-0.9
1,863,798	+		LRK53_RS08285	0.37	+0.9
1,863,798	+		LRK53_RS08285	0.37	+1.2
1,863,798	+		LRK53_RS08285	0.37	-0.4
1,863,798	+		LRK53_RS08285	0.37	-2.7
1,863,799	-		LRK53_RS08285	0.37	-1.0
1,863,799	-		LRK53_RS08285	0.37	-1.2
1,863,799	-		LRK53_RS08285	0.37	-0.8
1,863,799	-		LRK53_RS08285	0.37	+0.8
1,863,799	-		LRK53_RS08285	0.37	-2.0
1,863,799	-		LRK53_RS08285	0.37	-0.3
1,863,799	-		LRK53_RS08285	0.37	-2.4
1,863,799	-		LRK53_RS08285	0.37	-2.0
1,863,799	-		LRK53_RS08285	0.37	-1.8
1,863,799	-		LRK53_RS08285	0.37	-2.5
1,863,799	-		LRK53_RS08285	0.37	-1.1
1,863,799	-		LRK53_RS08285	0.37	-1.9
1,863,825	+		LRK53_RS08285	0.39	-3.0
1,863,826	-		LRK53_RS08285	0.39	-0.8
1,863,826	-		LRK53_RS08285	0.39	-0.5
1,863,826	-		LRK53_RS08285	0.39	-0.8
1,863,939	+		LRK53_RS08285	0.47	-1.5
1,863,939	+		LRK53_RS08285	0.47	+1.5
1,863,939	+		LRK53_RS08285	0.47	-0.8
1,863,939	+		LRK53_RS08285	0.47	+0.5
1,863,939	+		LRK53_RS08285	0.47	-1.9
1,863,939	+		LRK53_RS08285	0.47	-2.9
1,863,939	+		LRK53_RS08285	0.47	+0.9
1,863,939	+		LRK53_RS08285	0.47	-0.8
1,863,939	+		LRK53_RS08285	0.47	-1.2
1,863,939	+		LRK53_RS08285	0.47	+1.5
1,863,939	+		LRK53_RS08285	0.47	-0.5
1,863,939	+		LRK53_RS08285	0.47	-0.5
1,863,939	+		LRK53_RS08285	0.47	-1.0
1,863,939	+		LRK53_RS08285	0.47	+1.7
1,863,939	+		LRK53_RS08285	0.47	-1.4
1,863,939	+		LRK53_RS08285	0.47	-3.0
1,863,939	+		LRK53_RS08285	0.47	-1.8
1,863,939	+		LRK53_RS08285	0.47	-2.5
1,863,939	+		LRK53_RS08285	0.47	-2.0
1,863,939	+		LRK53_RS08285	0.47	+0.1
1,863,939	+		LRK53_RS08285	0.47	-2.4
1,863,939	+		LRK53_RS08285	0.47	-0.3
1,863,939	+		LRK53_RS08285	0.47	-0.8
1,863,940	-		LRK53_RS08285	0.47	-1.3
1,863,940	-		LRK53_RS08285	0.47	-0.5
1,863,940	-		LRK53_RS08285	0.47	-0.7
1,863,940	-		LRK53_RS08285	0.47	-1.0
1,863,940	-		LRK53_RS08285	0.47	+0.7
1,863,940	-		LRK53_RS08285	0.47	-1.2
1,863,940	-		LRK53_RS08285	0.47	-0.8
1,863,940	-		LRK53_RS08285	0.47	-0.8
1,863,940	-		LRK53_RS08285	0.47	-1.4
1,864,029	+		LRK53_RS08285	0.53	-0.3
1,864,029	+		LRK53_RS08285	0.53	-2.5
1,864,029	+		LRK53_RS08285	0.53	+0.4
1,864,029	+		LRK53_RS08285	0.53	+0.1
1,864,029	+		LRK53_RS08285	0.53	-1.0
1,864,029	+		LRK53_RS08285	0.53	+1.4
1,864,029	+		LRK53_RS08285	0.53	+0.3
1,864,029	+		LRK53_RS08285	0.53	+0.7
1,864,030	-		LRK53_RS08285	0.53	-0.3
1,864,030	-		LRK53_RS08285	0.53	+1.4
1,864,030	-		LRK53_RS08285	0.53	-1.3
1,864,030	-		LRK53_RS08285	0.53	-0.9
1,864,030	-		LRK53_RS08285	0.53	-1.0
1,864,030	-		LRK53_RS08285	0.53	-0.2
1,864,030	-		LRK53_RS08285	0.53	-0.4
1,864,030	-		LRK53_RS08285	0.53	-0.8
1,864,030	-		LRK53_RS08285	0.53	-1.3
1,864,086	+		LRK53_RS08285	0.57	-0.7
1,864,086	+		LRK53_RS08285	0.57	-1.1
1,864,086	+		LRK53_RS08285	0.57	-1.3
1,864,087	-		LRK53_RS08285	0.57	+0.7
1,864,087	-		LRK53_RS08285	0.57	-1.1
1,864,087	-		LRK53_RS08285	0.57	+0.3
1,864,087	-		LRK53_RS08285	0.57	-0.4