Strain Fitness in Rhodanobacter sp000427505 FW510-R12 around LRK53_RS04555

Experiment: planktonic; Day2; NLDM; Aluminum chloride 1mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	planktonic; Day2; NLDM; Aluminum chloride 1mM
1,057,367	+				-0.2
1,057,367	+				+0.2
1,057,367	+				-3.7
1,057,367	+				-0.4
1,057,368	-				-0.2
1,057,368	-				-0.8
1,057,429	+				-0.2
1,057,498	+				-1.5
1,057,499	-				+0.8
1,057,499	-				-0.7
1,057,499	-				-0.0
1,057,499	-				-1.4
1,057,558	+		LRK53_RS04550	0.13	-0.9
1,057,559	-		LRK53_RS04550	0.13	-1.7
1,057,660	+		LRK53_RS04550	0.27	-2.0
1,057,660	+		LRK53_RS04550	0.27	-1.6
1,057,660	+		LRK53_RS04550	0.27	+0.3
1,057,660	+		LRK53_RS04550	0.27	-2.0
1,057,660	+		LRK53_RS04550	0.27	-0.0
1,057,660	+		LRK53_RS04550	0.27	+0.3
1,057,660	+		LRK53_RS04550	0.27	-1.7
1,057,660	+		LRK53_RS04550	0.27	-0.3
1,057,660	+		LRK53_RS04550	0.27	-1.0
1,057,661	-		LRK53_RS04550	0.27	+1.2
1,057,661	-		LRK53_RS04550	0.27	+0.9
1,057,661	-		LRK53_RS04550	0.27	+0.4
1,057,661	-		LRK53_RS04550	0.27	-0.2
1,057,661	-		LRK53_RS04550	0.27	-0.6
1,057,661	-		LRK53_RS04550	0.27	-0.9
1,057,661	-		LRK53_RS04550	0.27	-0.9
1,057,661	-		LRK53_RS04550	0.27	-3.2
1,057,661	-		LRK53_RS04550	0.27	-0.5
1,057,661	-		LRK53_RS04550	0.27	-0.2
1,057,661	-		LRK53_RS04550	0.27	+0.8
1,057,661	-		LRK53_RS04550	0.27	+0.1
1,057,661	-		LRK53_RS04550	0.27	-0.2
1,057,661	-		LRK53_RS04550	0.27	-2.1
1,057,687	+		LRK53_RS04550	0.30	-0.7
1,057,720	+		LRK53_RS04550	0.35	-0.5
1,057,720	+		LRK53_RS04550	0.35	-1.4
1,057,720	+		LRK53_RS04550	0.35	+0.5
1,057,720	+		LRK53_RS04550	0.35	+0.9
1,057,720	+		LRK53_RS04550	0.35	-0.8
1,057,720	+		LRK53_RS04550	0.35	+1.6
1,057,720	+		LRK53_RS04550	0.35	-0.5
1,057,720	+		LRK53_RS04550	0.35	-2.0
1,057,720	+		LRK53_RS04550	0.35	+0.3
1,057,720	+		LRK53_RS04550	0.35	-0.9
1,057,720	+		LRK53_RS04550	0.35	-0.2
1,057,720	+		LRK53_RS04550	0.35	+0.8
1,057,720	+		LRK53_RS04550	0.35	-1.5
1,057,720	+		LRK53_RS04550	0.35	-0.6
1,057,720	+		LRK53_RS04550	0.35	-0.5
1,057,720	+		LRK53_RS04550	0.35	-0.1
1,057,720	+		LRK53_RS04550	0.35	+0.7
1,057,720	+		LRK53_RS04550	0.35	-0.2
1,057,721	-		LRK53_RS04550	0.35	-2.6
1,057,721	-		LRK53_RS04550	0.35	-0.9
1,057,721	-		LRK53_RS04550	0.35	-2.1
1,057,721	-		LRK53_RS04550	0.35	-1.9
1,057,721	-		LRK53_RS04550	0.35	-1.8
1,057,721	-		LRK53_RS04550	0.35	-1.7
1,057,721	-		LRK53_RS04550	0.35	-0.4
1,057,721	-		LRK53_RS04550	0.35	-1.2
1,057,721	-		LRK53_RS04550	0.35	-0.9
1,057,721	-		LRK53_RS04550	0.35	-0.4
1,057,721	-		LRK53_RS04550	0.35	-0.6
1,057,721	-		LRK53_RS04550	0.35	-2.3
1,057,721	-		LRK53_RS04550	0.35	-0.8
1,057,721	-		LRK53_RS04550	0.35	-2.2
1,057,721	-		LRK53_RS04550	0.35	-2.6
1,057,721	-		LRK53_RS04550	0.35	-0.9
1,057,721	-		LRK53_RS04550	0.35	+0.7
1,057,721	-		LRK53_RS04550	0.35	-0.4
1,057,721	-		LRK53_RS04550	0.35	-0.5
1,057,721	-		LRK53_RS04550	0.35	-1.4
1,057,721	-		LRK53_RS04550	0.35	-1.3
1,057,721	-		LRK53_RS04550	0.35	-0.7
1,057,774	+		LRK53_RS04550	0.42	-1.4
1,057,774	+		LRK53_RS04550	0.42	-2.0
1,057,774	+		LRK53_RS04550	0.42	+0.7
1,057,774	+		LRK53_RS04550	0.42	-1.2
1,057,774	+		LRK53_RS04550	0.42	-1.3
1,057,774	+		LRK53_RS04550	0.42	-2.2
1,057,774	+		LRK53_RS04550	0.42	+0.5
1,057,774	+		LRK53_RS04550	0.42	-0.4
1,057,774	+		LRK53_RS04550	0.42	-1.6
1,057,774	+		LRK53_RS04550	0.42	+0.5
1,057,774	+		LRK53_RS04550	0.42	-0.8
1,057,774	+		LRK53_RS04550	0.42	-0.2
1,057,775	+		LRK53_RS04550	0.42	-0.2
1,057,775	-		LRK53_RS04550	0.42	-0.0
1,057,775	-		LRK53_RS04550	0.42	-1.2
1,057,775	-		LRK53_RS04550	0.42	-0.9
1,057,775	-		LRK53_RS04550	0.42	-0.8
1,057,775	-		LRK53_RS04550	0.42	-1.1
1,057,775	-		LRK53_RS04550	0.42	-0.8
1,057,775	-		LRK53_RS04550	0.42	-1.5
1,057,775	-		LRK53_RS04550	0.42	-0.8
1,057,775	-		LRK53_RS04550	0.42	-0.9
1,057,775	-		LRK53_RS04550	0.42	+0.2
1,058,230	+				-0.9
1,058,231	-				-0.7
1,058,231	-				+0.2
1,058,231	-				+0.2
1,058,231	-				-2.4
1,058,231	-				+0.4
1,058,231	-				-0.9
1,058,232	+				-1.8
1,058,233	-				+0.1
1,058,233	-				-0.9
1,058,233	-				+0.5
1,058,233	-				-1.0
1,058,233	-				+0.2
1,058,233	-				+3.0
1,058,233	-				-0.0
1,058,233	-				-1.6
1,058,428	-		LRK53_RS04555	0.13	-1.7
1,058,428	-		LRK53_RS04555	0.13	-1.5
1,058,745	+		LRK53_RS04555	0.48	-2.6
1,058,745	+		LRK53_RS04555	0.48	+0.6
1,058,745	+		LRK53_RS04555	0.48	-4.0
1,058,745	+		LRK53_RS04555	0.48	-1.4
1,058,745	+		LRK53_RS04555	0.48	-2.0
1,058,745	+		LRK53_RS04555	0.48	-3.3
1,058,745	+		LRK53_RS04555	0.48	+1.0
1,058,745	+		LRK53_RS04555	0.48	+0.2
1,058,745	+		LRK53_RS04555	0.48	-3.3
1,058,745	+		LRK53_RS04555	0.48	-1.6
1,058,745	+		LRK53_RS04555	0.48	-1.2
1,058,745	+		LRK53_RS04555	0.48	-1.0
1,058,745	+		LRK53_RS04555	0.48	-0.4
1,058,746	-		LRK53_RS04555	0.48	+0.6
1,058,746	-		LRK53_RS04555	0.48	-0.8
1,058,746	-		LRK53_RS04555	0.48	-0.6
1,058,746	-		LRK53_RS04555	0.48	+0.8
1,058,746	-		LRK53_RS04555	0.48	-0.2
1,058,746	-		LRK53_RS04555	0.48	-1.6
1,058,746	-		LRK53_RS04555	0.48	+0.5
1,058,746	-		LRK53_RS04555	0.48	+0.2
1,058,746	-		LRK53_RS04555	0.48	+1.0
1,058,746	-		LRK53_RS04555	0.48	+0.2
1,058,746	-		LRK53_RS04555	0.48	+0.1
1,058,950	-		LRK53_RS04555	0.71	-0.5
1,058,950	-		LRK53_RS04555	0.71	-1.3
1,058,958	+		LRK53_RS04555	0.72	-1.4
1,058,958	+		LRK53_RS04555	0.72	-0.8
1,058,958	+		LRK53_RS04555	0.72	+0.1
1,058,959	-		LRK53_RS04555	0.72	+0.7
1,059,207	+				-2.9
1,059,207	+				-0.0
1,059,208	-				+1.3
1,059,208	-				-0.1
1,059,208	-				-0.8
1,059,496	+				-0.9
1,059,508	+				+0.0
1,059,508	+				-1.1
1,059,508	+				-0.2
1,059,508	+				-1.5
1,059,508	+				-1.6
1,059,509	-				-1.6
1,059,509	-				-1.9
1,059,509	-				-2.3
1,059,509	-				-0.8
1,059,509	-				+1.1
1,059,509	-				+2.4
1,059,509	-				+1.0
1,059,523	+		LRK53_RS04560	0.10	-1.0
1,059,524	-		LRK53_RS04560	0.10	+0.3
1,059,661	+		LRK53_RS04560	0.15	-0.5
1,059,661	+		LRK53_RS04560	0.15	-1.1
1,059,661	+		LRK53_RS04560	0.15	-0.3
1,059,661	+		LRK53_RS04560	0.15	-0.9
1,059,661	+		LRK53_RS04560	0.15	-2.0
1,059,661	+		LRK53_RS04560	0.15	-0.9
1,059,662	-		LRK53_RS04560	0.15	-0.0
1,059,662	-		LRK53_RS04560	0.15	+1.1
1,059,662	-		LRK53_RS04560	0.15	+0.6
1,059,662	-		LRK53_RS04560	0.15	-0.6
1,059,662	-		LRK53_RS04560	0.15	-0.7
1,059,940	+		LRK53_RS04560	0.25	+1.2
1,059,940	+		LRK53_RS04560	0.25	-1.6
1,059,940	+		LRK53_RS04560	0.25	-1.0
1,059,940	+		LRK53_RS04560	0.25	+0.3
1,059,940	+		LRK53_RS04560	0.25	-1.0
1,059,941	-		LRK53_RS04560	0.25	-2.4
1,060,072	+		LRK53_RS04560	0.29	+0.6
1,060,072	+		LRK53_RS04560	0.29	+0.8
1,060,072	+		LRK53_RS04560	0.29	+0.6
1,060,072	+		LRK53_RS04560	0.29	-0.0
1,060,072	+		LRK53_RS04560	0.29	+0.2
1,060,072	+		LRK53_RS04560	0.29	-1.2
1,060,072	+		LRK53_RS04560	0.29	+0.7
1,060,072	+		LRK53_RS04560	0.29	-0.7
1,060,072	+		LRK53_RS04560	0.29	-0.1
1,060,072	+		LRK53_RS04560	0.29	+1.0
1,060,072	+		LRK53_RS04560	0.29	+0.2
1,060,072	+		LRK53_RS04560	0.29	+0.5
1,060,073	-		LRK53_RS04560	0.29	-1.3
1,060,073	-		LRK53_RS04560	0.29	-0.3
1,060,073	-		LRK53_RS04560	0.29	-1.4
1,060,073	-		LRK53_RS04560	0.29	-2.3
1,060,073	-		LRK53_RS04560	0.29	-0.6
1,060,073	-		LRK53_RS04560	0.29	-0.6
1,060,073	-		LRK53_RS04560	0.29	-1.3
1,060,073	-		LRK53_RS04560	0.29	+0.6
1,060,073	-		LRK53_RS04560	0.29	-1.6
1,060,073	-		LRK53_RS04560	0.29	-0.9