Experiment: Motility_outer_sample_with_outgrowth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS28775 and QEN71_RS28780 are separated by 68 nucleotides QEN71_RS28780 and QEN71_RS28785 overlap by 4 nucleotides QEN71_RS28785 and QEN71_RS28790 are separated by 346 nucleotides QEN71_RS28790 and QEN71_RS28795 are separated by 237 nucleotides
QEN71_RS28775: QEN71_RS28775 - flagellar hook-length control protein FliK, at 6,382,097 to 6,383,479
_RS28775
QEN71_RS28780: QEN71_RS28780 - flagellar protein FliT, at 6,383,548 to 6,383,877
_RS28780
QEN71_RS28785: QEN71_RS28785 - flagellar export chaperone FliS, at 6,383,874 to 6,384,308
_RS28785
QEN71_RS28790: QEN71_RS28790 - flagellar hook-basal body complex protein FliE, at 6,384,655 to 6,384,990
_RS28790
QEN71_RS28795: QEN71_RS28795 - flagellar basal-body MS-ring/collar protein FliF, at 6,385,228 to 6,387,012
_RS28795
Position (kb)
6383
6384
6385 Strain fitness (log2 ratio)
-6
-5
-4
-3
-2
-1
0
1
2
3
4
5 at 6382.993 kb on - strand, within QEN71_RS28775 at 6382.993 kb on - strand, within QEN71_RS28775 at 6382.993 kb on - strand, within QEN71_RS28775 at 6383.069 kb on - strand, within QEN71_RS28775 at 6383.527 kb on + strand at 6383.527 kb on + strand at 6383.527 kb on + strand at 6383.527 kb on + strand at 6383.527 kb on + strand at 6383.527 kb on + strand at 6383.527 kb on + strand at 6383.528 kb on - strand at 6383.528 kb on - strand at 6383.528 kb on - strand at 6383.528 kb on - strand at 6383.528 kb on - strand at 6383.528 kb on - strand at 6383.528 kb on - strand at 6383.528 kb on - strand at 6383.528 kb on - strand at 6383.528 kb on - strand at 6383.528 kb on - strand at 6383.528 kb on - strand at 6383.528 kb on - strand at 6383.528 kb on - strand at 6383.528 kb on - strand at 6383.561 kb on + strand at 6383.561 kb on + strand at 6383.561 kb on + strand at 6383.562 kb on - strand at 6383.562 kb on - strand at 6383.562 kb on - strand at 6383.859 kb on - strand at 6384.030 kb on - strand, within QEN71_RS28785 at 6384.030 kb on - strand, within QEN71_RS28785 at 6384.030 kb on - strand, within QEN71_RS28785 at 6384.030 kb on - strand, within QEN71_RS28785 at 6384.030 kb on - strand, within QEN71_RS28785 at 6384.030 kb on - strand, within QEN71_RS28785 at 6384.030 kb on - strand, within QEN71_RS28785 at 6384.030 kb on - strand, within QEN71_RS28785 at 6384.030 kb on - strand, within QEN71_RS28785 at 6384.030 kb on - strand, within QEN71_RS28785 at 6384.030 kb on - strand, within QEN71_RS28785 at 6384.030 kb on - strand, within QEN71_RS28785 at 6384.030 kb on - strand, within QEN71_RS28785 at 6384.030 kb on - strand, within QEN71_RS28785 at 6384.031 kb on + strand, within QEN71_RS28785 at 6384.031 kb on + strand, within QEN71_RS28785 at 6384.031 kb on + strand, within QEN71_RS28785 at 6384.031 kb on + strand, within QEN71_RS28785 at 6384.032 kb on - strand, within QEN71_RS28785 at 6384.032 kb on - strand, within QEN71_RS28785 at 6384.032 kb on - strand, within QEN71_RS28785 at 6384.032 kb on - strand, within QEN71_RS28785 at 6384.032 kb on - strand, within QEN71_RS28785 at 6384.032 kb on - strand, within QEN71_RS28785 at 6384.032 kb on - strand, within QEN71_RS28785 at 6384.032 kb on - strand, within QEN71_RS28785 at 6384.032 kb on - strand, within QEN71_RS28785 at 6384.032 kb on - strand, within QEN71_RS28785 at 6384.032 kb on - strand, within QEN71_RS28785 at 6384.032 kb on - strand, within QEN71_RS28785 at 6384.032 kb on - strand, within QEN71_RS28785 at 6384.032 kb on - strand, within QEN71_RS28785 at 6384.032 kb on - strand, within QEN71_RS28785 at 6384.032 kb on - strand, within QEN71_RS28785 at 6384.032 kb on - strand, within QEN71_RS28785 at 6384.032 kb on - strand, within QEN71_RS28785 at 6384.032 kb on - strand, within QEN71_RS28785 at 6384.032 kb on - strand, within QEN71_RS28785 at 6384.032 kb on - strand, within QEN71_RS28785 at 6384.032 kb on - strand, within QEN71_RS28785 at 6384.032 kb on - strand, within QEN71_RS28785 at 6384.032 kb on - strand, within QEN71_RS28785 at 6384.032 kb on - strand, within QEN71_RS28785 at 6384.032 kb on - strand, within QEN71_RS28785 at 6384.032 kb on - strand, within QEN71_RS28785 at 6384.032 kb on - strand, within QEN71_RS28785 at 6384.032 kb on - strand, within QEN71_RS28785 at 6384.035 kb on + strand, within QEN71_RS28785 at 6384.035 kb on + strand, within QEN71_RS28785 at 6384.035 kb on + strand, within QEN71_RS28785 at 6384.036 kb on - strand, within QEN71_RS28785 at 6384.036 kb on - strand, within QEN71_RS28785 at 6384.036 kb on - strand, within QEN71_RS28785 at 6384.036 kb on - strand, within QEN71_RS28785 at 6384.036 kb on - strand, within QEN71_RS28785 at 6384.036 kb on - strand, within QEN71_RS28785 at 6384.036 kb on - strand, within QEN71_RS28785 at 6384.036 kb on - strand, within QEN71_RS28785 at 6384.036 kb on - strand, within QEN71_RS28785 at 6384.036 kb on - strand, within QEN71_RS28785 at 6384.036 kb on - strand, within QEN71_RS28785 at 6384.036 kb on - strand, within QEN71_RS28785 at 6384.036 kb on - strand, within QEN71_RS28785 at 6384.036 kb on - strand, within QEN71_RS28785 at 6384.036 kb on - strand, within QEN71_RS28785 at 6384.036 kb on - strand, within QEN71_RS28785 at 6384.036 kb on - strand, within QEN71_RS28785 at 6384.036 kb on - strand, within QEN71_RS28785 at 6384.036 kb on - strand, within QEN71_RS28785 at 6384.036 kb on - strand, within QEN71_RS28785 at 6384.036 kb on - strand, within QEN71_RS28785 at 6384.036 kb on - strand, within QEN71_RS28785 at 6384.036 kb on - strand, within QEN71_RS28785 at 6384.036 kb on - strand, within QEN71_RS28785 at 6384.036 kb on - strand, within QEN71_RS28785 at 6384.036 kb on - strand, within QEN71_RS28785 at 6384.036 kb on - strand, within QEN71_RS28785 at 6384.036 kb on - strand, within QEN71_RS28785 at 6384.036 kb on - strand, within QEN71_RS28785 at 6384.036 kb on - strand, within QEN71_RS28785 at 6384.036 kb on - strand, within QEN71_RS28785 at 6384.036 kb on - strand, within QEN71_RS28785 at 6384.036 kb on - strand, within QEN71_RS28785 at 6384.038 kb on - strand, within QEN71_RS28785 at 6384.038 kb on - strand, within QEN71_RS28785 at 6384.038 kb on - strand, within QEN71_RS28785 at 6384.038 kb on - strand, within QEN71_RS28785 at 6384.038 kb on - strand, within QEN71_RS28785 at 6384.038 kb on - strand, within QEN71_RS28785 at 6384.038 kb on - strand, within QEN71_RS28785 at 6384.038 kb on - strand, within QEN71_RS28785 at 6384.038 kb on - strand, within QEN71_RS28785 at 6384.038 kb on - strand, within QEN71_RS28785 at 6384.038 kb on - strand, within QEN71_RS28785 at 6384.153 kb on - strand, within QEN71_RS28785 at 6384.173 kb on + strand, within QEN71_RS28785 at 6384.174 kb on - strand, within QEN71_RS28785 at 6384.174 kb on - strand, within QEN71_RS28785 at 6384.174 kb on - strand, within QEN71_RS28785 at 6384.209 kb on - strand, within QEN71_RS28785 at 6384.209 kb on - strand, within QEN71_RS28785 at 6384.209 kb on - strand, within QEN71_RS28785 at 6384.209 kb on - strand, within QEN71_RS28785 at 6384.209 kb on - strand, within QEN71_RS28785 at 6384.209 kb on - strand, within QEN71_RS28785 at 6384.209 kb on - strand, within QEN71_RS28785 at 6384.209 kb on - strand, within QEN71_RS28785 at 6384.274 kb on + strand at 6384.275 kb on - strand at 6384.275 kb on - strand at 6384.275 kb on - strand at 6384.323 kb on + strand at 6384.323 kb on + strand at 6384.324 kb on - strand at 6384.324 kb on - strand at 6384.324 kb on - strand at 6384.324 kb on - strand at 6384.409 kb on + strand at 6384.409 kb on + strand at 6384.409 kb on + strand at 6384.410 kb on - strand at 6384.410 kb on - strand at 6384.410 kb on - strand at 6384.410 kb on - strand at 6384.410 kb on - strand at 6384.410 kb on - strand at 6384.410 kb on - strand at 6384.410 kb on - strand at 6384.410 kb on - strand at 6384.410 kb on - strand at 6384.410 kb on - strand at 6384.410 kb on - strand at 6384.410 kb on - strand at 6384.429 kb on - strand at 6384.429 kb on - strand at 6384.429 kb on - strand at 6384.429 kb on - strand at 6384.434 kb on + strand at 6384.434 kb on + strand at 6384.435 kb on - strand at 6384.442 kb on + strand at 6384.651 kb on + strand at 6384.651 kb on + strand at 6384.652 kb on - strand at 6384.683 kb on + strand at 6384.683 kb on + strand at 6384.684 kb on - strand at 6385.052 kb on + strand at 6385.052 kb on + strand at 6385.052 kb on + strand at 6385.052 kb on + strand at 6385.052 kb on + strand at 6385.052 kb on + strand at 6385.052 kb on + strand at 6385.084 kb on + strand at 6385.084 kb on + strand at 6385.084 kb on + strand at 6385.084 kb on + strand at 6385.085 kb on - strand at 6385.085 kb on - strand at 6385.104 kb on - strand at 6385.104 kb on - strand at 6385.177 kb on + strand at 6385.177 kb on + strand at 6385.178 kb on - strand at 6385.187 kb on + strand at 6385.188 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Motility_outer_sample_with_outgrowth remove 6,382,993 - QEN71_RS28775 0.65 -0.3 6,382,993 - QEN71_RS28775 0.65 -2.3 6,382,993 - QEN71_RS28775 0.65 -1.5 6,383,069 - QEN71_RS28775 0.70 -2.2 6,383,527 + +0.0 6,383,527 + +1.5 6,383,527 + +0.1 6,383,527 + +1.1 6,383,527 + +0.9 6,383,527 + -0.7 6,383,527 + +0.2 6,383,528 - -0.1 6,383,528 - -0.5 6,383,528 - -0.7 6,383,528 - -0.1 6,383,528 - +1.6 6,383,528 - +0.4 6,383,528 - -0.1 6,383,528 - -0.0 6,383,528 - +1.9 6,383,528 - +0.9 6,383,528 - +0.4 6,383,528 - +0.5 6,383,528 - -0.7 6,383,528 - +0.3 6,383,528 - +0.6 6,383,561 + -2.9 6,383,561 + -2.0 6,383,561 + -0.6 6,383,562 - -6.1 6,383,562 - -3.6 6,383,562 - -0.7 6,383,859 - +5.1 6,384,030 - QEN71_RS28785 0.36 -3.3 6,384,030 - QEN71_RS28785 0.36 -5.4 6,384,030 - QEN71_RS28785 0.36 -3.3 6,384,030 - QEN71_RS28785 0.36 -1.1 6,384,030 - QEN71_RS28785 0.36 -0.7 6,384,030 - QEN71_RS28785 0.36 -5.9 6,384,030 - QEN71_RS28785 0.36 -4.1 6,384,030 - QEN71_RS28785 0.36 -0.7 6,384,030 - QEN71_RS28785 0.36 -2.1 6,384,030 - QEN71_RS28785 0.36 -3.2 6,384,030 - QEN71_RS28785 0.36 -4.4 6,384,030 - QEN71_RS28785 0.36 -5.5 6,384,030 - QEN71_RS28785 0.36 -5.3 6,384,030 - QEN71_RS28785 0.36 -4.2 6,384,031 + QEN71_RS28785 0.36 +0.1 6,384,031 + QEN71_RS28785 0.36 -0.2 6,384,031 + QEN71_RS28785 0.36 -1.5 6,384,031 + QEN71_RS28785 0.36 -2.8 6,384,032 - QEN71_RS28785 0.36 -5.3 6,384,032 - QEN71_RS28785 0.36 -1.1 6,384,032 - QEN71_RS28785 0.36 -5.3 6,384,032 - QEN71_RS28785 0.36 -1.6 6,384,032 - QEN71_RS28785 0.36 -2.2 6,384,032 - QEN71_RS28785 0.36 -4.0 6,384,032 - QEN71_RS28785 0.36 -4.8 6,384,032 - QEN71_RS28785 0.36 -4.1 6,384,032 - QEN71_RS28785 0.36 -2.1 6,384,032 - QEN71_RS28785 0.36 -6.0 6,384,032 - QEN71_RS28785 0.36 -4.4 6,384,032 - QEN71_RS28785 0.36 -3.3 6,384,032 - QEN71_RS28785 0.36 -1.1 6,384,032 - QEN71_RS28785 0.36 -4.0 6,384,032 - QEN71_RS28785 0.36 -4.2 6,384,032 - QEN71_RS28785 0.36 -1.2 6,384,032 - QEN71_RS28785 0.36 -3.5 6,384,032 - QEN71_RS28785 0.36 -4.2 6,384,032 - QEN71_RS28785 0.36 -4.8 6,384,032 - QEN71_RS28785 0.36 -0.7 6,384,032 - QEN71_RS28785 0.36 -6.4 6,384,032 - QEN71_RS28785 0.36 -5.1 6,384,032 - QEN71_RS28785 0.36 -3.7 6,384,032 - QEN71_RS28785 0.36 -2.6 6,384,032 - QEN71_RS28785 0.36 -3.8 6,384,032 - QEN71_RS28785 0.36 -1.5 6,384,032 - QEN71_RS28785 0.36 -3.6 6,384,032 - QEN71_RS28785 0.36 -3.8 6,384,032 - QEN71_RS28785 0.36 -3.0 6,384,035 + QEN71_RS28785 0.37 -0.9 6,384,035 + QEN71_RS28785 0.37 +0.1 6,384,035 + QEN71_RS28785 0.37 -1.4 6,384,036 - QEN71_RS28785 0.37 -3.3 6,384,036 - QEN71_RS28785 0.37 -4.1 6,384,036 - QEN71_RS28785 0.37 -4.3 6,384,036 - QEN71_RS28785 0.37 -3.1 6,384,036 - QEN71_RS28785 0.37 -4.6 6,384,036 - QEN71_RS28785 0.37 -3.4 6,384,036 - QEN71_RS28785 0.37 -4.2 6,384,036 - QEN71_RS28785 0.37 -2.8 6,384,036 - QEN71_RS28785 0.37 -2.0 6,384,036 - QEN71_RS28785 0.37 -3.6 6,384,036 - QEN71_RS28785 0.37 -3.1 6,384,036 - QEN71_RS28785 0.37 -4.9 6,384,036 - QEN71_RS28785 0.37 -3.1 6,384,036 - QEN71_RS28785 0.37 -0.2 6,384,036 - QEN71_RS28785 0.37 -1.1 6,384,036 - QEN71_RS28785 0.37 -6.0 6,384,036 - QEN71_RS28785 0.37 -4.9 6,384,036 - QEN71_RS28785 0.37 -5.0 6,384,036 - QEN71_RS28785 0.37 -4.8 6,384,036 - QEN71_RS28785 0.37 -5.4 6,384,036 - QEN71_RS28785 0.37 -1.5 6,384,036 - QEN71_RS28785 0.37 +0.1 6,384,036 - QEN71_RS28785 0.37 -5.5 6,384,036 - QEN71_RS28785 0.37 -0.2 6,384,036 - QEN71_RS28785 0.37 -4.2 6,384,036 - QEN71_RS28785 0.37 -4.0 6,384,036 - QEN71_RS28785 0.37 -4.1 6,384,036 - QEN71_RS28785 0.37 -4.6 6,384,036 - QEN71_RS28785 0.37 -1.5 6,384,036 - QEN71_RS28785 0.37 -1.2 6,384,036 - QEN71_RS28785 0.37 -3.3 6,384,036 - QEN71_RS28785 0.37 -3.9 6,384,036 - QEN71_RS28785 0.37 -0.9 6,384,038 - QEN71_RS28785 0.38 -2.6 6,384,038 - QEN71_RS28785 0.38 -2.2 6,384,038 - QEN71_RS28785 0.38 -3.1 6,384,038 - QEN71_RS28785 0.38 -1.5 6,384,038 - QEN71_RS28785 0.38 -5.2 6,384,038 - QEN71_RS28785 0.38 -4.3 6,384,038 - QEN71_RS28785 0.38 -1.4 6,384,038 - QEN71_RS28785 0.38 -5.1 6,384,038 - QEN71_RS28785 0.38 -0.7 6,384,038 - QEN71_RS28785 0.38 -4.1 6,384,038 - QEN71_RS28785 0.38 -3.8 6,384,153 - QEN71_RS28785 0.64 -3.0 6,384,173 + QEN71_RS28785 0.69 +0.1 6,384,174 - QEN71_RS28785 0.69 -4.4 6,384,174 - QEN71_RS28785 0.69 -2.2 6,384,174 - QEN71_RS28785 0.69 -1.6 6,384,209 - QEN71_RS28785 0.77 -3.3 6,384,209 - QEN71_RS28785 0.77 -2.4 6,384,209 - QEN71_RS28785 0.77 -4.5 6,384,209 - QEN71_RS28785 0.77 -4.4 6,384,209 - QEN71_RS28785 0.77 -0.5 6,384,209 - QEN71_RS28785 0.77 -1.6 6,384,209 - QEN71_RS28785 0.77 -2.8 6,384,209 - QEN71_RS28785 0.77 -2.6 6,384,274 + -1.2 6,384,275 - -4.3 6,384,275 - -2.9 6,384,275 - -1.8 6,384,323 + +0.1 6,384,323 + -0.2 6,384,324 - -3.3 6,384,324 - -3.8 6,384,324 - +1.1 6,384,324 - -3.2 6,384,409 + -0.5 6,384,409 + -0.2 6,384,409 + -0.5 6,384,410 - -1.9 6,384,410 - -2.2 6,384,410 - -3.2 6,384,410 - +0.2 6,384,410 - -1.7 6,384,410 - -2.4 6,384,410 - -4.7 6,384,410 - -3.8 6,384,410 - -2.3 6,384,410 - -2.8 6,384,410 - -4.2 6,384,410 - -3.7 6,384,410 - -2.5 6,384,429 - +0.6 6,384,429 - +0.5 6,384,429 - -1.8 6,384,429 - -2.2 6,384,434 + +1.1 6,384,434 + -0.5 6,384,435 - -1.9 6,384,442 + +3.9 6,384,651 + +1.1 6,384,651 + +0.7 6,384,652 - -2.9 6,384,683 + -3.0 6,384,683 + -0.7 6,384,684 - -3.8 6,385,052 + +0.9 6,385,052 + -0.4 6,385,052 + +0.1 6,385,052 + +1.7 6,385,052 + -0.0 6,385,052 + +0.9 6,385,052 + +0.8 6,385,084 + -2.7 6,385,084 + -1.9 6,385,084 + -3.5 6,385,084 + -0.5 6,385,085 - -1.4 6,385,085 - -3.4 6,385,104 - -5.2 6,385,104 - -0.5 6,385,177 + +0.4 6,385,177 + +0.7 6,385,178 - -4.6 6,385,187 + -1.8 6,385,188 - -0.5
Or see this region's nucleotide sequence