Experiment: Motility_outer_sample_with_outgrowth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS28110 and QEN71_RS28115 are separated by 247 nucleotides QEN71_RS28115 and QEN71_RS28120 are separated by 126 nucleotides
QEN71_RS28110: QEN71_RS28110 - ribosome biogenesis GTP-binding protein YihA/YsxC, at 6,252,199 to 6,252,864
_RS28110
QEN71_RS28115: QEN71_RS28115 - porphobilinogen synthase, at 6,253,112 to 6,254,110
_RS28115
QEN71_RS28120: QEN71_RS28120 - protein-disulfide reductase DsbD, at 6,254,237 to 6,256,090
_RS28120
Position (kb)
6253
6254
6255 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 6252.862 kb on + strand at 6252.862 kb on + strand at 6252.862 kb on + strand at 6252.862 kb on + strand at 6252.863 kb on - strand at 6252.863 kb on - strand at 6252.863 kb on - strand at 6252.863 kb on - strand at 6252.873 kb on + strand at 6252.873 kb on + strand at 6252.873 kb on + strand at 6252.874 kb on - strand at 6252.874 kb on - strand at 6252.955 kb on + strand at 6252.964 kb on + strand at 6252.964 kb on + strand at 6252.965 kb on - strand at 6253.019 kb on - strand at 6253.019 kb on - strand at 6253.038 kb on + strand at 6253.039 kb on - strand at 6253.039 kb on - strand at 6253.039 kb on - strand at 6253.039 kb on - strand at 6253.043 kb on + strand at 6253.043 kb on + strand at 6253.043 kb on + strand at 6253.043 kb on + strand at 6253.043 kb on + strand at 6253.043 kb on + strand at 6253.043 kb on + strand at 6253.043 kb on + strand at 6253.043 kb on + strand at 6253.043 kb on + strand at 6253.043 kb on + strand at 6253.043 kb on + strand at 6253.043 kb on + strand at 6253.043 kb on + strand at 6253.043 kb on + strand at 6253.043 kb on + strand at 6253.044 kb on - strand at 6253.044 kb on - strand at 6253.044 kb on - strand at 6253.044 kb on - strand at 6253.044 kb on - strand at 6253.044 kb on - strand at 6253.044 kb on - strand at 6253.044 kb on - strand at 6253.044 kb on - strand at 6253.044 kb on - strand at 6253.044 kb on - strand at 6253.044 kb on - strand at 6253.044 kb on - strand at 6253.044 kb on - strand at 6253.045 kb on + strand at 6253.045 kb on + strand at 6253.045 kb on + strand at 6253.045 kb on + strand at 6253.045 kb on + strand at 6253.045 kb on + strand at 6253.045 kb on + strand at 6253.045 kb on + strand at 6253.045 kb on + strand at 6253.045 kb on + strand at 6253.045 kb on + strand at 6253.045 kb on + strand at 6253.045 kb on + strand at 6253.045 kb on + strand at 6253.045 kb on + strand at 6253.045 kb on + strand at 6253.045 kb on + strand at 6253.045 kb on + strand at 6253.045 kb on + strand at 6253.045 kb on + strand at 6253.045 kb on + strand at 6253.045 kb on + strand at 6253.045 kb on + strand at 6253.045 kb on + strand at 6253.045 kb on + strand at 6253.045 kb on + strand at 6253.046 kb on - strand at 6253.046 kb on - strand at 6253.046 kb on - strand at 6253.046 kb on - strand at 6253.046 kb on - strand at 6253.046 kb on - strand at 6253.046 kb on - strand at 6253.046 kb on - strand at 6253.046 kb on - strand at 6253.046 kb on - strand at 6253.046 kb on - strand at 6253.046 kb on - strand at 6253.046 kb on - strand at 6253.046 kb on - strand at 6253.046 kb on - strand at 6253.046 kb on - strand at 6253.046 kb on - strand at 6253.046 kb on - strand at 6253.046 kb on - strand at 6253.046 kb on - strand at 6253.046 kb on - strand at 6253.046 kb on - strand at 6253.046 kb on - strand at 6253.046 kb on - strand at 6253.103 kb on + strand at 6253.103 kb on + strand at 6253.103 kb on + strand at 6254.149 kb on + strand at 6254.149 kb on + strand at 6254.150 kb on - strand at 6254.150 kb on - strand at 6254.150 kb on - strand at 6254.150 kb on - strand at 6254.150 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Motility_outer_sample_with_outgrowth remove 6,252,862 + +0.2 6,252,862 + +0.2 6,252,862 + -1.6 6,252,862 + +0.5 6,252,863 - +1.1 6,252,863 - +0.4 6,252,863 - -0.6 6,252,863 - +1.1 6,252,873 + +0.4 6,252,873 + +0.6 6,252,873 + -0.4 6,252,874 - +0.6 6,252,874 - -0.1 6,252,955 + -0.5 6,252,964 + +0.0 6,252,964 + -1.3 6,252,965 - +0.2 6,253,019 - -1.4 6,253,019 - +1.3 6,253,038 + -0.1 6,253,039 - -0.4 6,253,039 - -0.7 6,253,039 - -0.9 6,253,039 - -0.2 6,253,043 + +1.6 6,253,043 + +0.5 6,253,043 + -0.3 6,253,043 + +0.8 6,253,043 + +0.3 6,253,043 + +1.1 6,253,043 + -0.1 6,253,043 + -0.1 6,253,043 + -0.4 6,253,043 + -0.8 6,253,043 + -0.4 6,253,043 + +0.1 6,253,043 + +0.1 6,253,043 + +2.5 6,253,043 + +0.7 6,253,043 + +0.4 6,253,044 - -1.3 6,253,044 - -0.9 6,253,044 - +0.7 6,253,044 - +1.1 6,253,044 - -0.8 6,253,044 - -1.3 6,253,044 - +0.3 6,253,044 - +0.5 6,253,044 - -1.2 6,253,044 - +0.2 6,253,044 - +1.1 6,253,044 - -0.5 6,253,044 - -1.0 6,253,044 - +0.2 6,253,045 + +0.3 6,253,045 + -0.4 6,253,045 + -2.0 6,253,045 + +0.4 6,253,045 + -0.0 6,253,045 + +0.3 6,253,045 + -0.8 6,253,045 + -0.1 6,253,045 + -0.4 6,253,045 + +0.7 6,253,045 + -0.1 6,253,045 + -0.7 6,253,045 + -2.9 6,253,045 + -0.9 6,253,045 + -0.2 6,253,045 + -1.6 6,253,045 + +0.2 6,253,045 + +0.5 6,253,045 + -0.8 6,253,045 + +0.2 6,253,045 + +0.1 6,253,045 + +0.2 6,253,045 + +1.4 6,253,045 + -0.8 6,253,045 + +0.4 6,253,045 + -0.2 6,253,046 - +0.7 6,253,046 - -0.9 6,253,046 - +0.1 6,253,046 - +0.0 6,253,046 - -0.9 6,253,046 - -0.5 6,253,046 - -0.4 6,253,046 - -1.3 6,253,046 - -0.1 6,253,046 - +0.1 6,253,046 - -0.0 6,253,046 - -2.3 6,253,046 - +0.3 6,253,046 - -1.7 6,253,046 - +0.4 6,253,046 - +0.5 6,253,046 - -0.3 6,253,046 - -1.9 6,253,046 - -0.3 6,253,046 - -1.4 6,253,046 - -0.0 6,253,046 - -0.3 6,253,046 - +0.5 6,253,046 - -0.5 6,253,103 + +1.3 6,253,103 + -1.0 6,253,103 + +0.5 6,254,149 + -0.8 6,254,149 + -0.8 6,254,150 - -0.4 6,254,150 - -0.0 6,254,150 - -0.2 6,254,150 - -0.4 6,254,150 - -1.6
Or see this region's nucleotide sequence