Experiment: Motility_outer_sample_with_outgrowth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS28090 and QEN71_RS28095 are separated by 174 nucleotides QEN71_RS28095 and QEN71_RS28100 are separated by 4 nucleotides
QEN71_RS28090: QEN71_RS28090 - protein-methionine-sulfoxide reductase catalytic subunit MsrP, at 6,246,522 to 6,247,517
_RS28090
QEN71_RS28095: QEN71_RS28095 - c-type cytochrome biogenesis protein CcsB, at 6,247,692 to 6,248,909
_RS28095
QEN71_RS28100: QEN71_RS28100 - cytochrome c biogenesis protein ResB, at 6,248,914 to 6,251,139
_RS28100
Position (kb)
6247
6248
6249 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2 at 6246.692 kb on - strand, within QEN71_RS28090 at 6246.692 kb on - strand, within QEN71_RS28090 at 6246.692 kb on - strand, within QEN71_RS28090 at 6246.692 kb on - strand, within QEN71_RS28090 at 6246.692 kb on - strand, within QEN71_RS28090 at 6246.700 kb on + strand, within QEN71_RS28090 at 6246.700 kb on + strand, within QEN71_RS28090 at 6246.700 kb on + strand, within QEN71_RS28090 at 6246.700 kb on + strand, within QEN71_RS28090 at 6246.701 kb on - strand, within QEN71_RS28090 at 6246.701 kb on - strand, within QEN71_RS28090 at 6246.701 kb on - strand, within QEN71_RS28090 at 6246.701 kb on - strand, within QEN71_RS28090 at 6246.715 kb on + strand, within QEN71_RS28090 at 6246.715 kb on + strand, within QEN71_RS28090 at 6246.716 kb on - strand, within QEN71_RS28090 at 6246.716 kb on - strand, within QEN71_RS28090 at 6246.716 kb on - strand, within QEN71_RS28090 at 6246.790 kb on + strand, within QEN71_RS28090 at 6246.790 kb on + strand, within QEN71_RS28090 at 6246.790 kb on + strand, within QEN71_RS28090 at 6246.791 kb on - strand, within QEN71_RS28090 at 6246.791 kb on - strand, within QEN71_RS28090 at 6246.791 kb on - strand, within QEN71_RS28090 at 6246.791 kb on - strand, within QEN71_RS28090 at 6246.791 kb on - strand, within QEN71_RS28090 at 6246.791 kb on - strand, within QEN71_RS28090 at 6246.791 kb on - strand, within QEN71_RS28090 at 6246.913 kb on + strand, within QEN71_RS28090 at 6246.913 kb on + strand, within QEN71_RS28090 at 6246.914 kb on - strand, within QEN71_RS28090 at 6246.914 kb on - strand, within QEN71_RS28090 at 6246.914 kb on - strand, within QEN71_RS28090 at 6246.985 kb on + strand, within QEN71_RS28090 at 6246.985 kb on + strand, within QEN71_RS28090 at 6246.985 kb on + strand, within QEN71_RS28090 at 6246.985 kb on + strand, within QEN71_RS28090 at 6246.985 kb on + strand, within QEN71_RS28090 at 6246.985 kb on + strand, within QEN71_RS28090 at 6246.985 kb on + strand, within QEN71_RS28090 at 6246.985 kb on + strand, within QEN71_RS28090 at 6246.985 kb on + strand, within QEN71_RS28090 at 6246.985 kb on + strand, within QEN71_RS28090 at 6246.986 kb on - strand, within QEN71_RS28090 at 6246.986 kb on - strand, within QEN71_RS28090 at 6246.986 kb on - strand, within QEN71_RS28090 at 6246.986 kb on - strand, within QEN71_RS28090 at 6246.986 kb on - strand, within QEN71_RS28090 at 6246.986 kb on - strand, within QEN71_RS28090 at 6246.986 kb on - strand, within QEN71_RS28090 at 6246.986 kb on - strand, within QEN71_RS28090 at 6246.986 kb on - strand, within QEN71_RS28090 at 6246.986 kb on - strand, within QEN71_RS28090 at 6246.986 kb on - strand, within QEN71_RS28090 at 6246.986 kb on - strand, within QEN71_RS28090 at 6246.986 kb on - strand, within QEN71_RS28090 at 6246.986 kb on - strand, within QEN71_RS28090 at 6247.087 kb on + strand, within QEN71_RS28090 at 6247.087 kb on + strand, within QEN71_RS28090 at 6247.088 kb on - strand, within QEN71_RS28090 at 6247.088 kb on - strand, within QEN71_RS28090 at 6247.088 kb on - strand, within QEN71_RS28090 at 6247.088 kb on - strand, within QEN71_RS28090 at 6247.088 kb on - strand, within QEN71_RS28090 at 6247.135 kb on + strand, within QEN71_RS28090 at 6247.135 kb on + strand, within QEN71_RS28090 at 6247.135 kb on + strand, within QEN71_RS28090 at 6247.135 kb on + strand, within QEN71_RS28090 at 6247.136 kb on - strand, within QEN71_RS28090 at 6247.136 kb on - strand, within QEN71_RS28090 at 6247.136 kb on - strand, within QEN71_RS28090 at 6247.136 kb on - strand, within QEN71_RS28090 at 6247.240 kb on + strand, within QEN71_RS28090 at 6247.240 kb on + strand, within QEN71_RS28090 at 6247.240 kb on + strand, within QEN71_RS28090 at 6247.241 kb on - strand, within QEN71_RS28090 at 6247.243 kb on + strand, within QEN71_RS28090 at 6247.243 kb on + strand, within QEN71_RS28090 at 6247.243 kb on + strand, within QEN71_RS28090 at 6247.243 kb on + strand, within QEN71_RS28090 at 6247.243 kb on + strand, within QEN71_RS28090 at 6247.243 kb on + strand, within QEN71_RS28090 at 6247.243 kb on + strand, within QEN71_RS28090 at 6247.243 kb on + strand, within QEN71_RS28090 at 6247.243 kb on + strand, within QEN71_RS28090 at 6247.244 kb on - strand, within QEN71_RS28090 at 6247.244 kb on - strand, within QEN71_RS28090 at 6247.244 kb on - strand, within QEN71_RS28090 at 6247.244 kb on - strand, within QEN71_RS28090 at 6247.244 kb on - strand, within QEN71_RS28090 at 6247.244 kb on - strand, within QEN71_RS28090 at 6247.244 kb on - strand, within QEN71_RS28090 at 6247.244 kb on - strand, within QEN71_RS28090 at 6247.244 kb on - strand, within QEN71_RS28090 at 6247.244 kb on - strand, within QEN71_RS28090 at 6247.252 kb on + strand, within QEN71_RS28090 at 6247.252 kb on + strand, within QEN71_RS28090 at 6247.252 kb on + strand, within QEN71_RS28090 at 6247.252 kb on + strand, within QEN71_RS28090 at 6247.252 kb on + strand, within QEN71_RS28090 at 6247.252 kb on + strand, within QEN71_RS28090 at 6247.252 kb on + strand, within QEN71_RS28090 at 6247.252 kb on + strand, within QEN71_RS28090 at 6247.253 kb on - strand, within QEN71_RS28090 at 6247.253 kb on - strand, within QEN71_RS28090 at 6247.253 kb on - strand, within QEN71_RS28090 at 6247.253 kb on - strand, within QEN71_RS28090 at 6247.253 kb on - strand, within QEN71_RS28090 at 6247.253 kb on - strand, within QEN71_RS28090 at 6247.253 kb on - strand, within QEN71_RS28090 at 6247.253 kb on - strand, within QEN71_RS28090 at 6247.270 kb on + strand, within QEN71_RS28090 at 6247.270 kb on + strand, within QEN71_RS28090 at 6247.271 kb on - strand, within QEN71_RS28090 at 6247.271 kb on - strand, within QEN71_RS28090 at 6247.454 kb on + strand at 6247.454 kb on + strand at 6247.483 kb on + strand at 6247.484 kb on - strand at 6247.484 kb on - strand at 6247.484 kb on - strand at 6247.484 kb on - strand at 6247.484 kb on - strand at 6247.626 kb on - strand at 6247.634 kb on - strand at 6247.693 kb on + strand at 6247.693 kb on + strand at 6247.693 kb on + strand at 6247.693 kb on + strand at 6247.693 kb on + strand at 6247.693 kb on + strand at 6247.693 kb on + strand at 6247.693 kb on + strand at 6247.694 kb on - strand at 6247.694 kb on - strand at 6248.714 kb on - strand, within QEN71_RS28095 at 6248.714 kb on - strand, within QEN71_RS28095 at 6248.714 kb on - strand, within QEN71_RS28095 at 6248.714 kb on - strand, within QEN71_RS28095 at 6248.714 kb on - strand, within QEN71_RS28095 at 6248.714 kb on - strand, within QEN71_RS28095 at 6248.714 kb on - strand, within QEN71_RS28095 at 6248.714 kb on - strand, within QEN71_RS28095 at 6248.714 kb on - strand, within QEN71_RS28095 at 6248.916 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Motility_outer_sample_with_outgrowth remove 6,246,692 - QEN71_RS28090 0.17 +0.2 6,246,692 - QEN71_RS28090 0.17 -0.7 6,246,692 - QEN71_RS28090 0.17 -0.2 6,246,692 - QEN71_RS28090 0.17 +0.6 6,246,692 - QEN71_RS28090 0.17 +1.0 6,246,700 + QEN71_RS28090 0.18 +0.2 6,246,700 + QEN71_RS28090 0.18 -0.1 6,246,700 + QEN71_RS28090 0.18 +0.0 6,246,700 + QEN71_RS28090 0.18 -0.5 6,246,701 - QEN71_RS28090 0.18 +1.4 6,246,701 - QEN71_RS28090 0.18 -0.5 6,246,701 - QEN71_RS28090 0.18 +0.7 6,246,701 - QEN71_RS28090 0.18 +0.6 6,246,715 + QEN71_RS28090 0.19 -0.3 6,246,715 + QEN71_RS28090 0.19 +2.2 6,246,716 - QEN71_RS28090 0.19 -0.0 6,246,716 - QEN71_RS28090 0.19 -0.5 6,246,716 - QEN71_RS28090 0.19 +0.7 6,246,790 + QEN71_RS28090 0.27 +1.2 6,246,790 + QEN71_RS28090 0.27 -1.1 6,246,790 + QEN71_RS28090 0.27 -0.3 6,246,791 - QEN71_RS28090 0.27 -1.6 6,246,791 - QEN71_RS28090 0.27 -1.4 6,246,791 - QEN71_RS28090 0.27 +0.1 6,246,791 - QEN71_RS28090 0.27 +0.5 6,246,791 - QEN71_RS28090 0.27 -0.4 6,246,791 - QEN71_RS28090 0.27 -1.2 6,246,791 - QEN71_RS28090 0.27 +0.1 6,246,913 + QEN71_RS28090 0.39 -0.5 6,246,913 + QEN71_RS28090 0.39 +0.9 6,246,914 - QEN71_RS28090 0.39 +1.2 6,246,914 - QEN71_RS28090 0.39 -0.3 6,246,914 - QEN71_RS28090 0.39 +0.7 6,246,985 + QEN71_RS28090 0.46 -1.3 6,246,985 + QEN71_RS28090 0.46 +0.1 6,246,985 + QEN71_RS28090 0.46 -0.9 6,246,985 + QEN71_RS28090 0.46 -1.0 6,246,985 + QEN71_RS28090 0.46 -0.5 6,246,985 + QEN71_RS28090 0.46 +0.2 6,246,985 + QEN71_RS28090 0.46 -0.5 6,246,985 + QEN71_RS28090 0.46 -1.8 6,246,985 + QEN71_RS28090 0.46 +1.4 6,246,985 + QEN71_RS28090 0.46 -0.5 6,246,986 - QEN71_RS28090 0.47 +0.6 6,246,986 - QEN71_RS28090 0.47 +0.2 6,246,986 - QEN71_RS28090 0.47 -0.2 6,246,986 - QEN71_RS28090 0.47 +1.7 6,246,986 - QEN71_RS28090 0.47 -0.9 6,246,986 - QEN71_RS28090 0.47 +0.6 6,246,986 - QEN71_RS28090 0.47 -0.5 6,246,986 - QEN71_RS28090 0.47 +0.6 6,246,986 - QEN71_RS28090 0.47 -0.2 6,246,986 - QEN71_RS28090 0.47 +0.1 6,246,986 - QEN71_RS28090 0.47 -0.1 6,246,986 - QEN71_RS28090 0.47 +0.6 6,246,986 - QEN71_RS28090 0.47 -0.8 6,246,986 - QEN71_RS28090 0.47 +1.1 6,247,087 + QEN71_RS28090 0.57 +0.2 6,247,087 + QEN71_RS28090 0.57 -0.8 6,247,088 - QEN71_RS28090 0.57 +0.4 6,247,088 - QEN71_RS28090 0.57 +1.1 6,247,088 - QEN71_RS28090 0.57 +1.4 6,247,088 - QEN71_RS28090 0.57 +0.4 6,247,088 - QEN71_RS28090 0.57 -0.7 6,247,135 + QEN71_RS28090 0.62 -0.3 6,247,135 + QEN71_RS28090 0.62 +0.5 6,247,135 + QEN71_RS28090 0.62 +0.7 6,247,135 + QEN71_RS28090 0.62 +0.6 6,247,136 - QEN71_RS28090 0.62 -0.1 6,247,136 - QEN71_RS28090 0.62 -1.1 6,247,136 - QEN71_RS28090 0.62 -0.4 6,247,136 - QEN71_RS28090 0.62 +0.5 6,247,240 + QEN71_RS28090 0.72 +0.8 6,247,240 + QEN71_RS28090 0.72 +2.3 6,247,240 + QEN71_RS28090 0.72 -0.0 6,247,241 - QEN71_RS28090 0.72 -0.0 6,247,243 + QEN71_RS28090 0.72 -0.4 6,247,243 + QEN71_RS28090 0.72 +0.4 6,247,243 + QEN71_RS28090 0.72 -0.1 6,247,243 + QEN71_RS28090 0.72 -0.4 6,247,243 + QEN71_RS28090 0.72 -0.9 6,247,243 + QEN71_RS28090 0.72 +0.1 6,247,243 + QEN71_RS28090 0.72 +0.8 6,247,243 + QEN71_RS28090 0.72 -0.8 6,247,243 + QEN71_RS28090 0.72 -0.1 6,247,244 - QEN71_RS28090 0.72 -1.2 6,247,244 - QEN71_RS28090 0.72 +0.5 6,247,244 - QEN71_RS28090 0.72 +0.9 6,247,244 - QEN71_RS28090 0.72 -0.6 6,247,244 - QEN71_RS28090 0.72 +0.2 6,247,244 - QEN71_RS28090 0.72 +1.1 6,247,244 - QEN71_RS28090 0.72 -0.5 6,247,244 - QEN71_RS28090 0.72 -1.4 6,247,244 - QEN71_RS28090 0.72 +1.5 6,247,244 - QEN71_RS28090 0.72 -0.6 6,247,252 + QEN71_RS28090 0.73 +0.1 6,247,252 + QEN71_RS28090 0.73 -0.3 6,247,252 + QEN71_RS28090 0.73 +0.0 6,247,252 + QEN71_RS28090 0.73 +0.8 6,247,252 + QEN71_RS28090 0.73 -1.6 6,247,252 + QEN71_RS28090 0.73 -0.2 6,247,252 + QEN71_RS28090 0.73 -0.0 6,247,252 + QEN71_RS28090 0.73 +0.9 6,247,253 - QEN71_RS28090 0.73 -0.3 6,247,253 - QEN71_RS28090 0.73 -1.8 6,247,253 - QEN71_RS28090 0.73 +0.6 6,247,253 - QEN71_RS28090 0.73 +0.2 6,247,253 - QEN71_RS28090 0.73 -0.3 6,247,253 - QEN71_RS28090 0.73 +1.4 6,247,253 - QEN71_RS28090 0.73 +0.2 6,247,253 - QEN71_RS28090 0.73 -0.5 6,247,270 + QEN71_RS28090 0.75 -0.1 6,247,270 + QEN71_RS28090 0.75 +1.3 6,247,271 - QEN71_RS28090 0.75 +1.1 6,247,271 - QEN71_RS28090 0.75 -0.1 6,247,454 + +1.1 6,247,454 + -0.4 6,247,483 + +0.0 6,247,484 - -1.5 6,247,484 - +0.7 6,247,484 - -0.1 6,247,484 - +1.8 6,247,484 - -1.6 6,247,626 - -0.8 6,247,634 - -0.4 6,247,693 + +0.0 6,247,693 + +0.2 6,247,693 + -0.1 6,247,693 + -0.5 6,247,693 + +0.1 6,247,693 + +1.1 6,247,693 + +0.8 6,247,693 + +0.8 6,247,694 - +0.5 6,247,694 - -0.3 6,248,714 - QEN71_RS28095 0.84 -3.4 6,248,714 - QEN71_RS28095 0.84 -4.9 6,248,714 - QEN71_RS28095 0.84 -3.8 6,248,714 - QEN71_RS28095 0.84 -3.3 6,248,714 - QEN71_RS28095 0.84 -2.2 6,248,714 - QEN71_RS28095 0.84 -2.1 6,248,714 - QEN71_RS28095 0.84 -4.6 6,248,714 - QEN71_RS28095 0.84 -0.8 6,248,714 - QEN71_RS28095 0.84 -3.6 6,248,916 - -0.3
Or see this region's nucleotide sequence