Experiment: Motility_outer_sample_with_outgrowth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS26975 and QEN71_RS26980 are separated by 111 nucleotides QEN71_RS26980 and QEN71_RS26985 are separated by 115 nucleotides QEN71_RS26985 and QEN71_RS26990 are separated by 30 nucleotides
QEN71_RS26975: QEN71_RS26975 - outer membrane protein assembly factor BamE, at 6,016,573 to 6,017,454
_RS26975
QEN71_RS26980: QEN71_RS26980 - ferric iron uptake transcriptional regulator, at 6,017,566 to 6,017,994
_RS26980
QEN71_RS26985: QEN71_RS26985 - ureidoglycolate lyase, at 6,018,110 to 6,018,622
_RS26985
QEN71_RS26990: QEN71_RS26990 - allantoicase, at 6,018,653 to 6,019,663
_RS26990
Position (kb)
6018
6019 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 6017.499 kb on - strand at 6017.499 kb on - strand at 6017.499 kb on - strand at 6017.499 kb on - strand at 6017.499 kb on - strand at 6017.499 kb on - strand at 6017.546 kb on + strand at 6017.546 kb on + strand at 6017.546 kb on + strand at 6018.021 kb on + strand at 6018.079 kb on + strand at 6018.079 kb on + strand at 6018.079 kb on + strand at 6018.079 kb on + strand at 6018.079 kb on + strand at 6018.079 kb on + strand at 6018.079 kb on + strand at 6018.079 kb on + strand at 6018.079 kb on + strand at 6018.079 kb on + strand at 6018.079 kb on + strand at 6018.079 kb on + strand at 6018.079 kb on + strand at 6018.079 kb on + strand at 6018.079 kb on + strand at 6018.079 kb on + strand at 6018.079 kb on + strand at 6018.079 kb on + strand at 6018.079 kb on + strand at 6018.080 kb on - strand at 6018.080 kb on - strand at 6018.080 kb on - strand at 6018.080 kb on - strand at 6018.080 kb on - strand at 6018.080 kb on - strand at 6018.080 kb on - strand at 6018.080 kb on - strand at 6018.080 kb on - strand at 6018.080 kb on - strand at 6018.080 kb on - strand at 6018.080 kb on - strand at 6018.080 kb on - strand at 6018.080 kb on - strand at 6018.080 kb on - strand at 6018.080 kb on - strand at 6018.080 kb on - strand at 6018.080 kb on - strand at 6018.080 kb on - strand at 6018.080 kb on - strand at 6018.080 kb on - strand at 6018.080 kb on - strand at 6018.080 kb on - strand at 6018.080 kb on - strand at 6018.313 kb on + strand, within QEN71_RS26985 at 6018.313 kb on + strand, within QEN71_RS26985 at 6018.313 kb on + strand, within QEN71_RS26985 at 6018.313 kb on + strand, within QEN71_RS26985 at 6018.314 kb on - strand, within QEN71_RS26985 at 6018.314 kb on - strand, within QEN71_RS26985 at 6018.314 kb on - strand, within QEN71_RS26985 at 6018.351 kb on + strand, within QEN71_RS26985 at 6018.351 kb on + strand, within QEN71_RS26985 at 6018.351 kb on + strand, within QEN71_RS26985 at 6018.352 kb on - strand, within QEN71_RS26985 at 6018.352 kb on - strand, within QEN71_RS26985 at 6018.371 kb on + strand, within QEN71_RS26985 at 6018.372 kb on - strand, within QEN71_RS26985 at 6018.372 kb on - strand, within QEN71_RS26985 at 6018.538 kb on - strand, within QEN71_RS26985 at 6018.647 kb on + strand at 6018.647 kb on + strand at 6018.648 kb on - strand at 6018.648 kb on - strand at 6018.648 kb on - strand at 6018.648 kb on - strand at 6018.655 kb on - strand at 6018.702 kb on + strand at 6018.702 kb on + strand at 6018.702 kb on + strand at 6018.703 kb on - strand at 6018.703 kb on - strand at 6019.080 kb on + strand, within QEN71_RS26990 at 6019.080 kb on + strand, within QEN71_RS26990 at 6019.081 kb on - strand, within QEN71_RS26990 at 6019.081 kb on - strand, within QEN71_RS26990 at 6019.081 kb on - strand, within QEN71_RS26990 at 6019.081 kb on - strand, within QEN71_RS26990 at 6019.081 kb on - strand, within QEN71_RS26990 at 6019.081 kb on - strand, within QEN71_RS26990 at 6019.081 kb on - strand, within QEN71_RS26990 at 6019.081 kb on - strand, within QEN71_RS26990 at 6019.081 kb on - strand, within QEN71_RS26990 at 6019.158 kb on + strand, within QEN71_RS26990 at 6019.191 kb on + strand, within QEN71_RS26990 at 6019.242 kb on + strand, within QEN71_RS26990 at 6019.242 kb on + strand, within QEN71_RS26990 at 6019.242 kb on + strand, within QEN71_RS26990 at 6019.242 kb on + strand, within QEN71_RS26990 at 6019.242 kb on + strand, within QEN71_RS26990 at 6019.242 kb on + strand, within QEN71_RS26990 at 6019.242 kb on + strand, within QEN71_RS26990 at 6019.243 kb on - strand, within QEN71_RS26990 at 6019.243 kb on - strand, within QEN71_RS26990 at 6019.243 kb on - strand, within QEN71_RS26990 at 6019.243 kb on - strand, within QEN71_RS26990 at 6019.243 kb on - strand, within QEN71_RS26990 at 6019.243 kb on - strand, within QEN71_RS26990 at 6019.243 kb on - strand, within QEN71_RS26990 at 6019.326 kb on + strand, within QEN71_RS26990 at 6019.326 kb on + strand, within QEN71_RS26990 at 6019.327 kb on - strand, within QEN71_RS26990 at 6019.327 kb on - strand, within QEN71_RS26990 at 6019.327 kb on - strand, within QEN71_RS26990 at 6019.378 kb on + strand, within QEN71_RS26990 at 6019.379 kb on - strand, within QEN71_RS26990 at 6019.431 kb on + strand, within QEN71_RS26990 at 6019.432 kb on - strand, within QEN71_RS26990 at 6019.432 kb on - strand, within QEN71_RS26990 at 6019.448 kb on - strand, within QEN71_RS26990 at 6019.448 kb on - strand, within QEN71_RS26990 at 6019.448 kb on - strand, within QEN71_RS26990 at 6019.497 kb on + strand, within QEN71_RS26990 at 6019.497 kb on + strand, within QEN71_RS26990 at 6019.497 kb on + strand, within QEN71_RS26990 at 6019.498 kb on - strand, within QEN71_RS26990 at 6019.498 kb on - strand, within QEN71_RS26990 at 6019.498 kb on - strand, within QEN71_RS26990 at 6019.498 kb on - strand, within QEN71_RS26990 at 6019.498 kb on - strand, within QEN71_RS26990 at 6019.498 kb on - strand, within QEN71_RS26990 at 6019.614 kb on + strand at 6019.614 kb on + strand at 6019.614 kb on + strand at 6019.615 kb on - strand at 6019.615 kb on - strand at 6019.615 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Motility_outer_sample_with_outgrowth remove 6,017,499 - +0.0 6,017,499 - +0.5 6,017,499 - -0.6 6,017,499 - -0.9 6,017,499 - +0.0 6,017,499 - -1.4 6,017,546 + +0.0 6,017,546 + -4.5 6,017,546 + -2.1 6,018,021 + +0.4 6,018,079 + +0.1 6,018,079 + -1.7 6,018,079 + -1.7 6,018,079 + +0.4 6,018,079 + -0.4 6,018,079 + -0.1 6,018,079 + -0.8 6,018,079 + +0.7 6,018,079 + +0.4 6,018,079 + -0.8 6,018,079 + -0.7 6,018,079 + +0.2 6,018,079 + -0.3 6,018,079 + +0.1 6,018,079 + -0.5 6,018,079 + -1.3 6,018,079 + -0.8 6,018,079 + -2.1 6,018,079 + -0.6 6,018,080 - +0.1 6,018,080 - -1.6 6,018,080 - -0.3 6,018,080 - -1.6 6,018,080 - +1.0 6,018,080 - +0.0 6,018,080 - -2.1 6,018,080 - +0.4 6,018,080 - -1.0 6,018,080 - -0.5 6,018,080 - -0.2 6,018,080 - +0.3 6,018,080 - +0.4 6,018,080 - -2.1 6,018,080 - -0.7 6,018,080 - -0.3 6,018,080 - -2.5 6,018,080 - -0.3 6,018,080 - -0.2 6,018,080 - +0.4 6,018,080 - +0.8 6,018,080 - -0.1 6,018,080 - +1.5 6,018,080 - +0.1 6,018,313 + QEN71_RS26985 0.40 -0.0 6,018,313 + QEN71_RS26985 0.40 -0.2 6,018,313 + QEN71_RS26985 0.40 -0.8 6,018,313 + QEN71_RS26985 0.40 -0.7 6,018,314 - QEN71_RS26985 0.40 -0.9 6,018,314 - QEN71_RS26985 0.40 -2.0 6,018,314 - QEN71_RS26985 0.40 -0.8 6,018,351 + QEN71_RS26985 0.47 -0.5 6,018,351 + QEN71_RS26985 0.47 -0.1 6,018,351 + QEN71_RS26985 0.47 +0.1 6,018,352 - QEN71_RS26985 0.47 +0.0 6,018,352 - QEN71_RS26985 0.47 -0.2 6,018,371 + QEN71_RS26985 0.51 +0.4 6,018,372 - QEN71_RS26985 0.51 -0.1 6,018,372 - QEN71_RS26985 0.51 +0.1 6,018,538 - QEN71_RS26985 0.83 -2.4 6,018,647 + -0.4 6,018,647 + +0.9 6,018,648 - +0.2 6,018,648 - -1.3 6,018,648 - -0.7 6,018,648 - +0.4 6,018,655 - +0.0 6,018,702 + -2.9 6,018,702 + +1.4 6,018,702 + +0.1 6,018,703 - -0.1 6,018,703 - -1.0 6,019,080 + QEN71_RS26990 0.42 -0.3 6,019,080 + QEN71_RS26990 0.42 +0.3 6,019,081 - QEN71_RS26990 0.42 -0.3 6,019,081 - QEN71_RS26990 0.42 +0.0 6,019,081 - QEN71_RS26990 0.42 -0.2 6,019,081 - QEN71_RS26990 0.42 -0.2 6,019,081 - QEN71_RS26990 0.42 +0.3 6,019,081 - QEN71_RS26990 0.42 +0.9 6,019,081 - QEN71_RS26990 0.42 +1.6 6,019,081 - QEN71_RS26990 0.42 -0.1 6,019,081 - QEN71_RS26990 0.42 +0.7 6,019,158 + QEN71_RS26990 0.50 +0.1 6,019,191 + QEN71_RS26990 0.53 -0.3 6,019,242 + QEN71_RS26990 0.58 -1.0 6,019,242 + QEN71_RS26990 0.58 -1.1 6,019,242 + QEN71_RS26990 0.58 +0.3 6,019,242 + QEN71_RS26990 0.58 -0.8 6,019,242 + QEN71_RS26990 0.58 -0.4 6,019,242 + QEN71_RS26990 0.58 -0.2 6,019,242 + QEN71_RS26990 0.58 -1.1 6,019,243 - QEN71_RS26990 0.58 +0.1 6,019,243 - QEN71_RS26990 0.58 +0.8 6,019,243 - QEN71_RS26990 0.58 -0.6 6,019,243 - QEN71_RS26990 0.58 +0.0 6,019,243 - QEN71_RS26990 0.58 +0.1 6,019,243 - QEN71_RS26990 0.58 -2.4 6,019,243 - QEN71_RS26990 0.58 -0.4 6,019,326 + QEN71_RS26990 0.67 +0.5 6,019,326 + QEN71_RS26990 0.67 +1.5 6,019,327 - QEN71_RS26990 0.67 -1.3 6,019,327 - QEN71_RS26990 0.67 -1.1 6,019,327 - QEN71_RS26990 0.67 -0.2 6,019,378 + QEN71_RS26990 0.72 -0.6 6,019,379 - QEN71_RS26990 0.72 -1.3 6,019,431 + QEN71_RS26990 0.77 +0.2 6,019,432 - QEN71_RS26990 0.77 +0.2 6,019,432 - QEN71_RS26990 0.77 +0.8 6,019,448 - QEN71_RS26990 0.79 -1.1 6,019,448 - QEN71_RS26990 0.79 +0.6 6,019,448 - QEN71_RS26990 0.79 -0.1 6,019,497 + QEN71_RS26990 0.83 -3.4 6,019,497 + QEN71_RS26990 0.83 +0.4 6,019,497 + QEN71_RS26990 0.83 -0.4 6,019,498 - QEN71_RS26990 0.84 +0.5 6,019,498 - QEN71_RS26990 0.84 +0.5 6,019,498 - QEN71_RS26990 0.84 +2.0 6,019,498 - QEN71_RS26990 0.84 -0.6 6,019,498 - QEN71_RS26990 0.84 -0.4 6,019,498 - QEN71_RS26990 0.84 -2.1 6,019,614 + -0.4 6,019,614 + +1.1 6,019,614 + -0.9 6,019,615 - +1.8 6,019,615 - +0.1 6,019,615 - +0.0
Or see this region's nucleotide sequence