Experiment: Motility_outer_sample_with_outgrowth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS23940 and QEN71_RS23945 are separated by 469 nucleotides QEN71_RS23945 and QEN71_RS23950 are separated by 206 nucleotides
QEN71_RS23940: QEN71_RS23940 - translesion DNA synthesis-associated protein ImuA, at 5,330,313 to 5,331,020
_RS23940
QEN71_RS23945: QEN71_RS23945 - 5S ribosomal RNA, at 5,331,490 to 5,331,603
_RS23945
QEN71_RS23950: QEN71_RS23950 - 23S ribosomal RNA, at 5,331,810 to 5,334,690
_RS23950
Position (kb) 5331
5332 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 5330.494 kb on - strand, within QEN71_RS23940 at 5330.509 kb on - strand, within QEN71_RS23940 at 5330.509 kb on - strand, within QEN71_RS23940 at 5330.740 kb on + strand, within QEN71_RS23940 at 5330.740 kb on + strand, within QEN71_RS23940 at 5330.741 kb on - strand, within QEN71_RS23940 at 5330.741 kb on - strand, within QEN71_RS23940 at 5330.741 kb on - strand, within QEN71_RS23940 at 5330.741 kb on - strand, within QEN71_RS23940 at 5330.741 kb on - strand, within QEN71_RS23940 at 5330.741 kb on - strand, within QEN71_RS23940 at 5330.741 kb on - strand, within QEN71_RS23940 at 5330.841 kb on + strand, within QEN71_RS23940 at 5330.977 kb on - strand at 5331.027 kb on - strand at 5331.035 kb on - strand at 5331.043 kb on - strand at 5331.048 kb on + strand at 5331.136 kb on + strand at 5331.137 kb on - strand at 5331.190 kb on - strand at 5331.206 kb on + strand at 5331.207 kb on - strand at 5331.230 kb on + strand at 5331.230 kb on + strand at 5331.230 kb on + strand at 5331.230 kb on + strand at 5331.230 kb on + strand at 5331.230 kb on + strand at 5331.230 kb on + strand at 5331.230 kb on + strand at 5331.230 kb on + strand at 5331.231 kb on - strand at 5331.231 kb on - strand at 5331.231 kb on - strand at 5331.231 kb on - strand at 5331.231 kb on - strand at 5331.231 kb on - strand at 5331.231 kb on - strand at 5331.236 kb on + strand at 5331.236 kb on + strand at 5331.236 kb on + strand at 5331.236 kb on + strand at 5331.237 kb on - strand at 5331.237 kb on - strand at 5331.237 kb on - strand at 5331.237 kb on - strand at 5331.237 kb on - strand at 5331.237 kb on - strand at 5331.320 kb on + strand at 5331.321 kb on - strand at 5331.321 kb on - strand at 5331.338 kb on - strand at 5331.429 kb on - strand at 5331.501 kb on - strand at 5331.501 kb on - strand at 5331.505 kb on - strand, within QEN71_RS23945 at 5331.505 kb on - strand, within QEN71_RS23945 at 5331.505 kb on - strand, within QEN71_RS23945 at 5331.505 kb on - strand, within QEN71_RS23945
Per-strain Table
Position Strand Gene LocusTag Fraction Motility_outer_sample_with_outgrowth remove 5,330,494 - QEN71_RS23940 0.26 -1.0 5,330,509 - QEN71_RS23940 0.28 -0.5 5,330,509 - QEN71_RS23940 0.28 +1.1 5,330,740 + QEN71_RS23940 0.60 -0.3 5,330,740 + QEN71_RS23940 0.60 -1.2 5,330,741 - QEN71_RS23940 0.60 -0.4 5,330,741 - QEN71_RS23940 0.60 +0.7 5,330,741 - QEN71_RS23940 0.60 +0.7 5,330,741 - QEN71_RS23940 0.60 -1.2 5,330,741 - QEN71_RS23940 0.60 +0.2 5,330,741 - QEN71_RS23940 0.60 -0.7 5,330,741 - QEN71_RS23940 0.60 -0.2 5,330,841 + QEN71_RS23940 0.75 +0.2 5,330,977 - -2.2 5,331,027 - +0.2 5,331,035 - +0.6 5,331,043 - +1.6 5,331,048 + -2.0 5,331,136 + +0.4 5,331,137 - -0.8 5,331,190 - -1.0 5,331,206 + -0.2 5,331,207 - -0.9 5,331,230 + -0.8 5,331,230 + -1.6 5,331,230 + -0.6 5,331,230 + +0.1 5,331,230 + -0.7 5,331,230 + +0.7 5,331,230 + +0.6 5,331,230 + -0.9 5,331,230 + +0.2 5,331,231 - +0.1 5,331,231 - +0.1 5,331,231 - +0.1 5,331,231 - +1.1 5,331,231 - +0.1 5,331,231 - +0.0 5,331,231 - -1.4 5,331,236 + +0.1 5,331,236 + -0.3 5,331,236 + -0.3 5,331,236 + +0.4 5,331,237 - -0.1 5,331,237 - -0.1 5,331,237 - +0.3 5,331,237 - -0.2 5,331,237 - -0.4 5,331,237 - -1.3 5,331,320 + +1.2 5,331,321 - -0.2 5,331,321 - -0.3 5,331,338 - -0.9 5,331,429 - -0.8 5,331,501 - +0.8 5,331,501 - -1.5 5,331,505 - QEN71_RS23945 0.13 -2.8 5,331,505 - QEN71_RS23945 0.13 -2.2 5,331,505 - QEN71_RS23945 0.13 -1.4 5,331,505 - QEN71_RS23945 0.13 -0.7
Or see this region's nucleotide sequence