Experiment: Motility_outer_sample_with_outgrowth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS21905 and QEN71_RS21910 are separated by 1 nucleotides QEN71_RS21910 and QEN71_RS21915 are separated by 10 nucleotides QEN71_RS21915 and QEN71_RS21920 are separated by 662 nucleotides
QEN71_RS21905: QEN71_RS21905 - septation protein A, at 4,857,741 to 4,858,271
_RS21905
QEN71_RS21910: QEN71_RS21910 - BolA family protein, at 4,858,273 to 4,858,587
_RS21910
QEN71_RS21915: QEN71_RS21915 - peptidylprolyl isomerase, at 4,858,598 to 4,859,377
_RS21915
QEN71_RS21920: QEN71_RS21920 - phosphoribosylformylglycinamidine synthase, at 4,860,040 to 4,864,119
_RS21920
Position (kb) 4858
4859
4860 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 4858.254 kb on + strand at 4858.254 kb on + strand at 4858.255 kb on - strand at 4858.255 kb on - strand at 4858.255 kb on - strand at 4858.255 kb on - strand at 4858.429 kb on + strand, within QEN71_RS21910 at 4858.430 kb on - strand, within QEN71_RS21910 at 4858.495 kb on + strand, within QEN71_RS21910 at 4858.495 kb on + strand, within QEN71_RS21910 at 4858.495 kb on + strand, within QEN71_RS21910 at 4858.495 kb on + strand, within QEN71_RS21910 at 4858.495 kb on + strand, within QEN71_RS21910 at 4858.495 kb on + strand, within QEN71_RS21910 at 4858.495 kb on + strand, within QEN71_RS21910 at 4858.495 kb on + strand, within QEN71_RS21910 at 4858.495 kb on + strand, within QEN71_RS21910 at 4858.495 kb on + strand, within QEN71_RS21910 at 4858.495 kb on + strand, within QEN71_RS21910 at 4858.495 kb on + strand, within QEN71_RS21910 at 4858.495 kb on + strand, within QEN71_RS21910 at 4858.496 kb on - strand, within QEN71_RS21910 at 4858.496 kb on - strand, within QEN71_RS21910 at 4858.496 kb on - strand, within QEN71_RS21910 at 4858.496 kb on - strand, within QEN71_RS21910 at 4858.496 kb on - strand, within QEN71_RS21910 at 4858.496 kb on - strand, within QEN71_RS21910 at 4858.496 kb on - strand, within QEN71_RS21910 at 4858.496 kb on - strand, within QEN71_RS21910 at 4858.496 kb on - strand, within QEN71_RS21910 at 4858.552 kb on + strand, within QEN71_RS21910 at 4858.552 kb on + strand, within QEN71_RS21910 at 4858.553 kb on - strand, within QEN71_RS21910 at 4858.553 kb on - strand, within QEN71_RS21910 at 4858.553 kb on - strand, within QEN71_RS21910 at 4858.585 kb on + strand at 4858.910 kb on + strand, within QEN71_RS21915 at 4858.911 kb on - strand, within QEN71_RS21915 at 4858.955 kb on + strand, within QEN71_RS21915 at 4858.991 kb on + strand, within QEN71_RS21915 at 4858.991 kb on + strand, within QEN71_RS21915 at 4858.991 kb on + strand, within QEN71_RS21915 at 4858.992 kb on - strand, within QEN71_RS21915 at 4858.992 kb on - strand, within QEN71_RS21915 at 4859.153 kb on + strand, within QEN71_RS21915 at 4859.153 kb on + strand, within QEN71_RS21915 at 4859.153 kb on + strand, within QEN71_RS21915 at 4859.153 kb on + strand, within QEN71_RS21915 at 4859.153 kb on + strand, within QEN71_RS21915 at 4859.154 kb on - strand, within QEN71_RS21915 at 4859.154 kb on - strand, within QEN71_RS21915 at 4859.154 kb on - strand, within QEN71_RS21915 at 4859.154 kb on - strand, within QEN71_RS21915 at 4859.154 kb on - strand, within QEN71_RS21915 at 4859.154 kb on - strand, within QEN71_RS21915 at 4859.154 kb on - strand, within QEN71_RS21915 at 4859.221 kb on + strand, within QEN71_RS21915 at 4859.221 kb on + strand, within QEN71_RS21915 at 4859.222 kb on - strand, within QEN71_RS21915 at 4859.222 kb on - strand, within QEN71_RS21915 at 4859.222 kb on - strand, within QEN71_RS21915 at 4859.359 kb on + strand at 4859.359 kb on + strand at 4859.360 kb on - strand at 4859.365 kb on + strand at 4859.365 kb on + strand at 4859.365 kb on + strand at 4859.366 kb on - strand at 4859.751 kb on + strand at 4859.751 kb on + strand at 4859.751 kb on + strand at 4859.751 kb on + strand at 4859.751 kb on + strand at 4859.751 kb on + strand at 4859.752 kb on - strand at 4859.752 kb on - strand at 4859.752 kb on - strand at 4859.752 kb on - strand at 4859.752 kb on - strand at 4859.752 kb on - strand at 4859.752 kb on - strand at 4859.832 kb on + strand at 4860.035 kb on - strand at 4860.035 kb on - strand at 4860.035 kb on - strand at 4860.035 kb on - strand at 4860.035 kb on - strand at 4860.041 kb on + strand at 4860.141 kb on + strand at 4860.141 kb on + strand at 4860.141 kb on + strand at 4860.141 kb on + strand at 4860.141 kb on + strand at 4860.141 kb on + strand at 4860.142 kb on - strand at 4860.142 kb on - strand at 4860.142 kb on - strand at 4860.142 kb on - strand at 4860.142 kb on - strand at 4860.142 kb on - strand at 4860.142 kb on - strand at 4860.148 kb on + strand at 4860.148 kb on + strand at 4860.148 kb on + strand at 4860.149 kb on - strand at 4860.177 kb on + strand at 4860.177 kb on + strand at 4860.178 kb on - strand at 4860.178 kb on - strand at 4860.178 kb on - strand at 4860.178 kb on - strand at 4860.178 kb on - strand at 4860.195 kb on + strand at 4860.196 kb on - strand at 4860.196 kb on - strand at 4860.207 kb on + strand at 4860.207 kb on + strand at 4860.207 kb on + strand at 4860.208 kb on - strand at 4860.208 kb on - strand at 4860.208 kb on - strand at 4860.208 kb on - strand at 4860.208 kb on - strand at 4860.208 kb on - strand at 4860.228 kb on + strand at 4860.228 kb on + strand at 4860.275 kb on + strand at 4860.275 kb on + strand at 4860.275 kb on + strand at 4860.275 kb on + strand at 4860.275 kb on + strand at 4860.275 kb on + strand at 4860.275 kb on + strand at 4860.276 kb on - strand at 4860.276 kb on - strand at 4860.276 kb on - strand at 4860.276 kb on - strand at 4860.276 kb on - strand at 4860.276 kb on - strand at 4860.276 kb on - strand at 4860.276 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Motility_outer_sample_with_outgrowth remove 4,858,254 + -1.1 4,858,254 + +1.6 4,858,255 - -0.6 4,858,255 - -0.0 4,858,255 - -0.3 4,858,255 - -1.3 4,858,429 + QEN71_RS21910 0.50 -1.6 4,858,430 - QEN71_RS21910 0.50 +0.6 4,858,495 + QEN71_RS21910 0.70 +1.0 4,858,495 + QEN71_RS21910 0.70 +0.5 4,858,495 + QEN71_RS21910 0.70 -0.7 4,858,495 + QEN71_RS21910 0.70 +0.1 4,858,495 + QEN71_RS21910 0.70 -2.3 4,858,495 + QEN71_RS21910 0.70 -0.9 4,858,495 + QEN71_RS21910 0.70 -2.6 4,858,495 + QEN71_RS21910 0.70 +0.6 4,858,495 + QEN71_RS21910 0.70 -1.6 4,858,495 + QEN71_RS21910 0.70 +0.4 4,858,495 + QEN71_RS21910 0.70 +0.5 4,858,495 + QEN71_RS21910 0.70 +2.1 4,858,495 + QEN71_RS21910 0.70 -1.6 4,858,496 - QEN71_RS21910 0.71 +0.1 4,858,496 - QEN71_RS21910 0.71 -0.4 4,858,496 - QEN71_RS21910 0.71 -0.3 4,858,496 - QEN71_RS21910 0.71 -0.1 4,858,496 - QEN71_RS21910 0.71 +0.0 4,858,496 - QEN71_RS21910 0.71 +1.1 4,858,496 - QEN71_RS21910 0.71 -0.7 4,858,496 - QEN71_RS21910 0.71 -1.0 4,858,496 - QEN71_RS21910 0.71 -0.8 4,858,552 + QEN71_RS21910 0.89 +0.4 4,858,552 + QEN71_RS21910 0.89 -2.1 4,858,553 - QEN71_RS21910 0.89 -1.0 4,858,553 - QEN71_RS21910 0.89 -0.9 4,858,553 - QEN71_RS21910 0.89 -2.1 4,858,585 + +0.9 4,858,910 + QEN71_RS21915 0.40 -1.2 4,858,911 - QEN71_RS21915 0.40 -1.6 4,858,955 + QEN71_RS21915 0.46 -1.6 4,858,991 + QEN71_RS21915 0.50 -3.1 4,858,991 + QEN71_RS21915 0.50 -1.2 4,858,991 + QEN71_RS21915 0.50 -1.2 4,858,992 - QEN71_RS21915 0.51 -2.0 4,858,992 - QEN71_RS21915 0.51 -0.3 4,859,153 + QEN71_RS21915 0.71 -2.6 4,859,153 + QEN71_RS21915 0.71 -2.5 4,859,153 + QEN71_RS21915 0.71 -2.0 4,859,153 + QEN71_RS21915 0.71 -1.3 4,859,153 + QEN71_RS21915 0.71 -2.0 4,859,154 - QEN71_RS21915 0.71 -2.0 4,859,154 - QEN71_RS21915 0.71 -1.0 4,859,154 - QEN71_RS21915 0.71 +1.6 4,859,154 - QEN71_RS21915 0.71 -3.0 4,859,154 - QEN71_RS21915 0.71 -1.4 4,859,154 - QEN71_RS21915 0.71 -1.0 4,859,154 - QEN71_RS21915 0.71 -0.0 4,859,221 + QEN71_RS21915 0.80 -2.8 4,859,221 + QEN71_RS21915 0.80 -1.6 4,859,222 - QEN71_RS21915 0.80 -1.9 4,859,222 - QEN71_RS21915 0.80 -1.3 4,859,222 - QEN71_RS21915 0.80 +1.0 4,859,359 + +0.3 4,859,359 + -2.1 4,859,360 - -1.4 4,859,365 + -1.0 4,859,365 + -2.1 4,859,365 + -0.8 4,859,366 - -2.0 4,859,751 + +1.1 4,859,751 + -0.8 4,859,751 + -1.1 4,859,751 + +0.3 4,859,751 + -0.2 4,859,751 + +0.6 4,859,752 - -0.6 4,859,752 - +0.9 4,859,752 - -0.2 4,859,752 - +0.4 4,859,752 - +0.1 4,859,752 - -1.0 4,859,752 - -0.1 4,859,832 + +0.1 4,860,035 - +0.7 4,860,035 - -0.8 4,860,035 - +1.1 4,860,035 - -0.5 4,860,035 - +0.4 4,860,041 + +1.1 4,860,141 + -0.4 4,860,141 + -0.6 4,860,141 + -0.3 4,860,141 + -0.0 4,860,141 + +1.4 4,860,141 + +0.9 4,860,142 - +1.5 4,860,142 - +0.4 4,860,142 - +1.3 4,860,142 - +0.5 4,860,142 - +0.4 4,860,142 - -0.7 4,860,142 - +1.2 4,860,148 + -0.9 4,860,148 + -0.6 4,860,148 + +0.5 4,860,149 - -0.4 4,860,177 + +1.7 4,860,177 + -0.7 4,860,178 - -0.3 4,860,178 - -0.8 4,860,178 - -1.0 4,860,178 - +1.2 4,860,178 - -0.1 4,860,195 + +0.4 4,860,196 - +0.4 4,860,196 - +1.4 4,860,207 + +0.4 4,860,207 + +0.5 4,860,207 + -0.8 4,860,208 - +1.0 4,860,208 - +1.0 4,860,208 - -0.2 4,860,208 - +1.1 4,860,208 - +1.4 4,860,208 - -0.9 4,860,228 + +0.7 4,860,228 + -0.7 4,860,275 + -0.0 4,860,275 + -0.0 4,860,275 + +0.0 4,860,275 + +0.6 4,860,275 + -0.2 4,860,275 + -0.6 4,860,275 + +1.4 4,860,276 - -0.2 4,860,276 - +0.7 4,860,276 - -0.2 4,860,276 - -0.5 4,860,276 - -1.3 4,860,276 - +0.1 4,860,276 - -0.9 4,860,276 - +0.0
Or see this region's nucleotide sequence