Experiment: Motility_outer_sample_with_outgrowth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS21530 and QEN71_RS21535 overlap by 4 nucleotides QEN71_RS21535 and QEN71_RS21540 are separated by 552 nucleotides
QEN71_RS21530: QEN71_RS21530 - aspartate aminotransferase family protein, at 4,769,290 to 4,770,549
_RS21530
QEN71_RS21535: QEN71_RS21535 - EamA family transporter RarD, at 4,770,546 to 4,771,640
_RS21535
QEN71_RS21540: QEN71_RS21540 - TerB N-terminal domain-containing protein, at 4,772,193 to 4,774,484
_RS21540
Position (kb) 4770
4771
4772 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 4769.983 kb on + strand, within QEN71_RS21530 at 4770.585 kb on + strand at 4770.633 kb on + strand at 4770.633 kb on + strand at 4770.633 kb on + strand at 4770.633 kb on + strand at 4770.633 kb on + strand at 4770.633 kb on + strand at 4770.633 kb on + strand at 4770.634 kb on - strand at 4770.634 kb on - strand at 4770.634 kb on - strand at 4770.634 kb on - strand at 4770.634 kb on - strand at 4770.634 kb on - strand at 4770.634 kb on - strand at 4770.634 kb on - strand at 4770.636 kb on + strand at 4770.636 kb on + strand at 4770.637 kb on - strand at 4770.637 kb on - strand at 4770.637 kb on - strand at 4770.816 kb on + strand, within QEN71_RS21535 at 4770.816 kb on + strand, within QEN71_RS21535 at 4770.816 kb on + strand, within QEN71_RS21535 at 4770.816 kb on + strand, within QEN71_RS21535 at 4770.816 kb on + strand, within QEN71_RS21535 at 4770.816 kb on + strand, within QEN71_RS21535 at 4770.816 kb on + strand, within QEN71_RS21535 at 4770.816 kb on + strand, within QEN71_RS21535 at 4770.816 kb on + strand, within QEN71_RS21535 at 4770.816 kb on + strand, within QEN71_RS21535 at 4770.816 kb on + strand, within QEN71_RS21535 at 4770.816 kb on + strand, within QEN71_RS21535 at 4770.816 kb on + strand, within QEN71_RS21535 at 4770.816 kb on + strand, within QEN71_RS21535 at 4770.817 kb on - strand, within QEN71_RS21535 at 4770.817 kb on - strand, within QEN71_RS21535 at 4770.817 kb on - strand, within QEN71_RS21535 at 4770.817 kb on - strand, within QEN71_RS21535 at 4770.817 kb on - strand, within QEN71_RS21535 at 4770.817 kb on - strand, within QEN71_RS21535 at 4770.817 kb on - strand, within QEN71_RS21535 at 4770.817 kb on - strand, within QEN71_RS21535 at 4770.817 kb on - strand, within QEN71_RS21535 at 4770.817 kb on - strand, within QEN71_RS21535 at 4770.817 kb on - strand, within QEN71_RS21535 at 4770.817 kb on - strand, within QEN71_RS21535 at 4770.819 kb on - strand, within QEN71_RS21535 at 4770.819 kb on - strand, within QEN71_RS21535 at 4770.839 kb on + strand, within QEN71_RS21535 at 4771.085 kb on + strand, within QEN71_RS21535 at 4771.085 kb on + strand, within QEN71_RS21535 at 4771.085 kb on + strand, within QEN71_RS21535 at 4771.085 kb on + strand, within QEN71_RS21535 at 4771.085 kb on + strand, within QEN71_RS21535 at 4771.086 kb on - strand, within QEN71_RS21535 at 4771.086 kb on - strand, within QEN71_RS21535 at 4771.086 kb on - strand, within QEN71_RS21535 at 4771.086 kb on - strand, within QEN71_RS21535 at 4771.086 kb on - strand, within QEN71_RS21535 at 4771.086 kb on - strand, within QEN71_RS21535 at 4771.086 kb on - strand, within QEN71_RS21535 at 4771.128 kb on + strand, within QEN71_RS21535 at 4771.129 kb on - strand, within QEN71_RS21535 at 4771.173 kb on + strand, within QEN71_RS21535 at 4771.239 kb on + strand, within QEN71_RS21535 at 4771.240 kb on - strand, within QEN71_RS21535 at 4771.290 kb on + strand, within QEN71_RS21535 at 4771.290 kb on + strand, within QEN71_RS21535 at 4771.290 kb on + strand, within QEN71_RS21535 at 4771.290 kb on + strand, within QEN71_RS21535 at 4771.290 kb on + strand, within QEN71_RS21535 at 4771.290 kb on + strand, within QEN71_RS21535 at 4771.291 kb on - strand, within QEN71_RS21535 at 4771.291 kb on - strand, within QEN71_RS21535 at 4771.291 kb on - strand, within QEN71_RS21535 at 4771.404 kb on + strand, within QEN71_RS21535 at 4771.404 kb on + strand, within QEN71_RS21535 at 4771.405 kb on - strand, within QEN71_RS21535 at 4771.405 kb on - strand, within QEN71_RS21535 at 4771.405 kb on - strand, within QEN71_RS21535 at 4771.577 kb on + strand at 4771.578 kb on - strand at 4771.578 kb on - strand at 4771.578 kb on - strand at 4771.578 kb on - strand at 4771.693 kb on + strand at 4771.693 kb on + strand at 4771.693 kb on + strand at 4771.694 kb on - strand at 4771.694 kb on - strand at 4771.694 kb on - strand at 4771.694 kb on - strand at 4771.712 kb on + strand at 4771.713 kb on - strand at 4771.713 kb on - strand at 4771.713 kb on - strand at 4771.713 kb on - strand at 4771.718 kb on + strand at 4771.718 kb on + strand at 4771.718 kb on + strand at 4771.719 kb on - strand at 4771.719 kb on - strand at 4771.719 kb on - strand at 4771.719 kb on - strand at 4771.719 kb on - strand at 4771.779 kb on + strand at 4771.779 kb on + strand at 4771.779 kb on + strand at 4771.779 kb on + strand at 4771.779 kb on + strand at 4771.779 kb on + strand at 4771.780 kb on - strand at 4771.780 kb on - strand at 4771.793 kb on + strand at 4771.793 kb on + strand at 4771.793 kb on + strand at 4771.794 kb on - strand at 4771.887 kb on + strand at 4771.887 kb on + strand at 4771.887 kb on + strand at 4771.887 kb on + strand at 4771.887 kb on + strand at 4771.887 kb on + strand at 4771.887 kb on + strand at 4771.887 kb on + strand at 4771.887 kb on + strand at 4771.887 kb on + strand at 4771.887 kb on + strand at 4771.887 kb on + strand at 4771.887 kb on + strand at 4771.888 kb on - strand at 4771.888 kb on - strand at 4771.888 kb on - strand at 4771.888 kb on - strand at 4771.888 kb on - strand at 4771.888 kb on - strand at 4771.888 kb on - strand at 4771.888 kb on - strand at 4771.888 kb on - strand at 4771.889 kb on + strand at 4771.889 kb on + strand at 4771.889 kb on + strand at 4771.889 kb on + strand at 4771.889 kb on + strand at 4771.889 kb on + strand at 4771.889 kb on + strand at 4771.889 kb on + strand at 4771.889 kb on + strand at 4771.890 kb on - strand at 4771.890 kb on - strand at 4771.890 kb on - strand at 4771.890 kb on - strand at 4771.890 kb on - strand at 4771.890 kb on - strand at 4771.890 kb on - strand at 4771.890 kb on - strand at 4771.962 kb on + strand at 4771.962 kb on + strand at 4771.962 kb on + strand at 4771.962 kb on + strand at 4771.962 kb on + strand at 4771.963 kb on - strand at 4771.963 kb on - strand at 4771.963 kb on - strand at 4771.963 kb on - strand at 4772.214 kb on + strand at 4772.214 kb on + strand at 4772.306 kb on + strand at 4772.312 kb on + strand at 4772.312 kb on + strand at 4772.312 kb on + strand at 4772.312 kb on + strand at 4772.312 kb on + strand at 4772.312 kb on + strand at 4772.312 kb on + strand at 4772.313 kb on - strand at 4772.313 kb on - strand at 4772.313 kb on - strand at 4772.313 kb on - strand at 4772.313 kb on - strand at 4772.313 kb on - strand at 4772.385 kb on + strand at 4772.385 kb on + strand at 4772.508 kb on + strand, within QEN71_RS21540 at 4772.508 kb on + strand, within QEN71_RS21540 at 4772.508 kb on + strand, within QEN71_RS21540 at 4772.508 kb on + strand, within QEN71_RS21540 at 4772.508 kb on + strand, within QEN71_RS21540 at 4772.508 kb on + strand, within QEN71_RS21540 at 4772.508 kb on + strand, within QEN71_RS21540 at 4772.509 kb on - strand, within QEN71_RS21540 at 4772.509 kb on - strand, within QEN71_RS21540 at 4772.520 kb on - strand, within QEN71_RS21540 at 4772.520 kb on - strand, within QEN71_RS21540 at 4772.520 kb on - strand, within QEN71_RS21540 at 4772.542 kb on - strand, within QEN71_RS21540 at 4772.592 kb on + strand, within QEN71_RS21540 at 4772.593 kb on - strand, within QEN71_RS21540 at 4772.593 kb on - strand, within QEN71_RS21540 at 4772.604 kb on + strand, within QEN71_RS21540 at 4772.604 kb on + strand, within QEN71_RS21540 at 4772.604 kb on + strand, within QEN71_RS21540 at 4772.605 kb on - strand, within QEN71_RS21540 at 4772.610 kb on + strand, within QEN71_RS21540 at 4772.611 kb on - strand, within QEN71_RS21540 at 4772.611 kb on - strand, within QEN71_RS21540 at 4772.611 kb on - strand, within QEN71_RS21540
Per-strain Table
Position Strand Gene LocusTag Fraction Motility_outer_sample_with_outgrowth remove 4,769,983 + QEN71_RS21530 0.55 -1.7 4,770,585 + +0.3 4,770,633 + +0.7 4,770,633 + -1.5 4,770,633 + -0.2 4,770,633 + -0.7 4,770,633 + -0.2 4,770,633 + -0.2 4,770,633 + -0.7 4,770,634 - +1.1 4,770,634 - -0.1 4,770,634 - +1.3 4,770,634 - -1.2 4,770,634 - +1.6 4,770,634 - -1.1 4,770,634 - +0.2 4,770,634 - +0.5 4,770,636 + -0.2 4,770,636 + +0.4 4,770,637 - -2.7 4,770,637 - -0.6 4,770,637 - -1.5 4,770,816 + QEN71_RS21535 0.25 -0.0 4,770,816 + QEN71_RS21535 0.25 -0.6 4,770,816 + QEN71_RS21535 0.25 -0.5 4,770,816 + QEN71_RS21535 0.25 +0.4 4,770,816 + QEN71_RS21535 0.25 -1.6 4,770,816 + QEN71_RS21535 0.25 +1.7 4,770,816 + QEN71_RS21535 0.25 +0.1 4,770,816 + QEN71_RS21535 0.25 +1.3 4,770,816 + QEN71_RS21535 0.25 -0.0 4,770,816 + QEN71_RS21535 0.25 -0.6 4,770,816 + QEN71_RS21535 0.25 +0.3 4,770,816 + QEN71_RS21535 0.25 -0.2 4,770,816 + QEN71_RS21535 0.25 -0.2 4,770,816 + QEN71_RS21535 0.25 +0.1 4,770,817 - QEN71_RS21535 0.25 -0.4 4,770,817 - QEN71_RS21535 0.25 -0.3 4,770,817 - QEN71_RS21535 0.25 +1.7 4,770,817 - QEN71_RS21535 0.25 +0.3 4,770,817 - QEN71_RS21535 0.25 -2.4 4,770,817 - QEN71_RS21535 0.25 -0.4 4,770,817 - QEN71_RS21535 0.25 -0.2 4,770,817 - QEN71_RS21535 0.25 -0.2 4,770,817 - QEN71_RS21535 0.25 -0.7 4,770,817 - QEN71_RS21535 0.25 -0.4 4,770,817 - QEN71_RS21535 0.25 -0.1 4,770,817 - QEN71_RS21535 0.25 +0.1 4,770,819 - QEN71_RS21535 0.25 -0.1 4,770,819 - QEN71_RS21535 0.25 -1.2 4,770,839 + QEN71_RS21535 0.27 -1.2 4,771,085 + QEN71_RS21535 0.49 -1.4 4,771,085 + QEN71_RS21535 0.49 -0.1 4,771,085 + QEN71_RS21535 0.49 -0.9 4,771,085 + QEN71_RS21535 0.49 -0.1 4,771,085 + QEN71_RS21535 0.49 +0.2 4,771,086 - QEN71_RS21535 0.49 +0.1 4,771,086 - QEN71_RS21535 0.49 +1.7 4,771,086 - QEN71_RS21535 0.49 -0.9 4,771,086 - QEN71_RS21535 0.49 -1.6 4,771,086 - QEN71_RS21535 0.49 -0.9 4,771,086 - QEN71_RS21535 0.49 -0.1 4,771,086 - QEN71_RS21535 0.49 -0.6 4,771,128 + QEN71_RS21535 0.53 -0.4 4,771,129 - QEN71_RS21535 0.53 +0.7 4,771,173 + QEN71_RS21535 0.57 -0.3 4,771,239 + QEN71_RS21535 0.63 -0.5 4,771,240 - QEN71_RS21535 0.63 -0.2 4,771,290 + QEN71_RS21535 0.68 +0.4 4,771,290 + QEN71_RS21535 0.68 -0.5 4,771,290 + QEN71_RS21535 0.68 +0.1 4,771,290 + QEN71_RS21535 0.68 -0.0 4,771,290 + QEN71_RS21535 0.68 -0.1 4,771,290 + QEN71_RS21535 0.68 +0.9 4,771,291 - QEN71_RS21535 0.68 +0.4 4,771,291 - QEN71_RS21535 0.68 -0.6 4,771,291 - QEN71_RS21535 0.68 -0.5 4,771,404 + QEN71_RS21535 0.78 -1.1 4,771,404 + QEN71_RS21535 0.78 +0.8 4,771,405 - QEN71_RS21535 0.78 +0.2 4,771,405 - QEN71_RS21535 0.78 -1.0 4,771,405 - QEN71_RS21535 0.78 +0.8 4,771,577 + -0.3 4,771,578 - +0.2 4,771,578 - -0.2 4,771,578 - +0.0 4,771,578 - -1.4 4,771,693 + -0.5 4,771,693 + -0.1 4,771,693 + -1.0 4,771,694 - +1.4 4,771,694 - -1.6 4,771,694 - +3.1 4,771,694 - +0.2 4,771,712 + -0.2 4,771,713 - -0.4 4,771,713 - +0.8 4,771,713 - +0.9 4,771,713 - -0.7 4,771,718 + -1.5 4,771,718 + +0.8 4,771,718 + +0.6 4,771,719 - +0.9 4,771,719 - +0.8 4,771,719 - -0.2 4,771,719 - +0.1 4,771,719 - -0.2 4,771,779 + -1.2 4,771,779 + +1.1 4,771,779 + +0.5 4,771,779 + -0.0 4,771,779 + +0.0 4,771,779 + -1.5 4,771,780 - +0.9 4,771,780 - +0.4 4,771,793 + +0.5 4,771,793 + -0.4 4,771,793 + -1.3 4,771,794 - +1.7 4,771,887 + +0.5 4,771,887 + -0.6 4,771,887 + +1.4 4,771,887 + -0.2 4,771,887 + +0.5 4,771,887 + +0.6 4,771,887 + +0.5 4,771,887 + +0.1 4,771,887 + +1.0 4,771,887 + +0.8 4,771,887 + +0.9 4,771,887 + +0.1 4,771,887 + +2.4 4,771,888 - +0.8 4,771,888 - +0.9 4,771,888 - +1.4 4,771,888 - -0.0 4,771,888 - +0.1 4,771,888 - +1.6 4,771,888 - +1.7 4,771,888 - +0.5 4,771,888 - +0.6 4,771,889 + +0.3 4,771,889 + -1.8 4,771,889 + +0.3 4,771,889 + +0.5 4,771,889 + +0.6 4,771,889 + +0.8 4,771,889 + +0.6 4,771,889 + -2.0 4,771,889 + +1.5 4,771,890 - -0.4 4,771,890 - +0.3 4,771,890 - -0.9 4,771,890 - -0.1 4,771,890 - +0.4 4,771,890 - +0.5 4,771,890 - +0.7 4,771,890 - -1.7 4,771,962 + +0.2 4,771,962 + -0.0 4,771,962 + -0.2 4,771,962 + -0.9 4,771,962 + -0.7 4,771,963 - +0.4 4,771,963 - -2.1 4,771,963 - +0.4 4,771,963 - -0.7 4,772,214 + -0.9 4,772,214 + -0.1 4,772,306 + +0.3 4,772,312 + +1.0 4,772,312 + -0.1 4,772,312 + -0.3 4,772,312 + -1.0 4,772,312 + +0.5 4,772,312 + +0.3 4,772,312 + +1.0 4,772,313 - +1.5 4,772,313 - -0.1 4,772,313 - -0.5 4,772,313 - +1.8 4,772,313 - -0.6 4,772,313 - +0.7 4,772,385 + +0.1 4,772,385 + +1.0 4,772,508 + QEN71_RS21540 0.14 -0.5 4,772,508 + QEN71_RS21540 0.14 +0.5 4,772,508 + QEN71_RS21540 0.14 +0.8 4,772,508 + QEN71_RS21540 0.14 +0.1 4,772,508 + QEN71_RS21540 0.14 -1.4 4,772,508 + QEN71_RS21540 0.14 -2.2 4,772,508 + QEN71_RS21540 0.14 +0.1 4,772,509 - QEN71_RS21540 0.14 -0.0 4,772,509 - QEN71_RS21540 0.14 +1.7 4,772,520 - QEN71_RS21540 0.14 +1.1 4,772,520 - QEN71_RS21540 0.14 -1.4 4,772,520 - QEN71_RS21540 0.14 -1.1 4,772,542 - QEN71_RS21540 0.15 -0.5 4,772,592 + QEN71_RS21540 0.17 -2.2 4,772,593 - QEN71_RS21540 0.17 -0.4 4,772,593 - QEN71_RS21540 0.17 -1.4 4,772,604 + QEN71_RS21540 0.18 -1.3 4,772,604 + QEN71_RS21540 0.18 -0.0 4,772,604 + QEN71_RS21540 0.18 +0.7 4,772,605 - QEN71_RS21540 0.18 -1.4 4,772,610 + QEN71_RS21540 0.18 -0.3 4,772,611 - QEN71_RS21540 0.18 -0.5 4,772,611 - QEN71_RS21540 0.18 -0.7 4,772,611 - QEN71_RS21540 0.18 +0.2
Or see this region's nucleotide sequence