Experiment: Motility_outer_sample_with_outgrowth
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS03800 and QEN71_RS03805 overlap by 17 nucleotides QEN71_RS03805 and QEN71_RS03810 overlap by 20 nucleotides QEN71_RS03810 and QEN71_RS03815 are separated by 2 nucleotides QEN71_RS03815 and QEN71_RS03820 overlap by 1 nucleotides
QEN71_RS03800: QEN71_RS03800 - beta-ketoacyl synthase chain length factor, at 840,366 to 841,106
_RS03800
QEN71_RS03805: QEN71_RS03805 - lysophospholipid acyltransferase family protein, at 841,090 to 841,884
_RS03805
QEN71_RS03810: QEN71_RS03810 - phosphopantetheine-binding protein, at 841,865 to 842,164
_RS03810
QEN71_RS03815: QEN71_RS03815 - acyl carrier protein, at 842,167 to 842,418
_RS03815
QEN71_RS03820: QEN71_RS03820 - hypothetical protein, at 842,418 to 843,116
_RS03820
Position (kb) 841
842 Strain fitness (log2 ratio) -2
-1
0
1
2 at 840.102 kb on - strand at 840.102 kb on - strand at 840.111 kb on + strand at 840.111 kb on + strand at 840.111 kb on + strand at 840.111 kb on + strand at 840.111 kb on + strand at 840.111 kb on + strand at 840.111 kb on + strand at 840.111 kb on + strand at 840.111 kb on + strand at 840.111 kb on + strand at 840.112 kb on - strand at 840.112 kb on - strand at 840.112 kb on - strand at 840.112 kb on - strand at 840.112 kb on - strand at 840.112 kb on - strand at 840.112 kb on - strand at 840.112 kb on - strand at 840.148 kb on + strand at 840.148 kb on + strand at 840.148 kb on + strand at 840.148 kb on + strand at 840.148 kb on + strand at 840.148 kb on + strand at 840.149 kb on - strand at 840.149 kb on - strand at 840.149 kb on - strand at 840.149 kb on - strand at 840.149 kb on - strand at 840.149 kb on - strand at 840.169 kb on + strand at 840.169 kb on + strand at 840.169 kb on + strand at 840.170 kb on - strand at 840.170 kb on - strand at 840.211 kb on + strand at 840.211 kb on + strand at 840.211 kb on + strand at 840.211 kb on + strand at 840.211 kb on + strand at 840.211 kb on + strand at 840.211 kb on + strand at 840.212 kb on - strand at 840.212 kb on - strand at 840.212 kb on - strand at 840.212 kb on - strand at 840.212 kb on - strand at 840.212 kb on - strand at 840.212 kb on - strand at 840.212 kb on - strand at 840.212 kb on - strand at 840.231 kb on + strand at 840.247 kb on + strand at 840.248 kb on - strand at 840.248 kb on - strand at 840.248 kb on - strand at 840.296 kb on - strand at 840.365 kb on + strand at 840.366 kb on - strand at 840.366 kb on - strand at 840.366 kb on - strand at 840.763 kb on - strand, within QEN71_RS03800 at 840.763 kb on - strand, within QEN71_RS03800 at 840.798 kb on + strand, within QEN71_RS03800 at 840.799 kb on - strand, within QEN71_RS03800 at 840.799 kb on - strand, within QEN71_RS03800 at 840.826 kb on - strand, within QEN71_RS03800 at 840.939 kb on + strand, within QEN71_RS03800 at 840.941 kb on + strand, within QEN71_RS03800 at 840.941 kb on + strand, within QEN71_RS03800 at 840.941 kb on + strand, within QEN71_RS03800 at 840.941 kb on + strand, within QEN71_RS03800 at 840.941 kb on + strand, within QEN71_RS03800 at 840.941 kb on + strand, within QEN71_RS03800 at 840.942 kb on - strand, within QEN71_RS03800 at 840.942 kb on - strand, within QEN71_RS03800 at 840.953 kb on + strand, within QEN71_RS03800 at 840.953 kb on + strand, within QEN71_RS03800 at 840.953 kb on + strand, within QEN71_RS03800 at 840.953 kb on + strand, within QEN71_RS03800 at 840.954 kb on - strand, within QEN71_RS03800 at 840.954 kb on - strand, within QEN71_RS03800 at 841.040 kb on + strand at 841.040 kb on + strand at 841.040 kb on + strand at 841.040 kb on + strand at 841.040 kb on + strand at 841.041 kb on - strand at 841.041 kb on - strand at 841.041 kb on - strand at 841.041 kb on - strand at 841.041 kb on - strand at 841.041 kb on - strand at 841.066 kb on - strand at 841.108 kb on + strand at 841.108 kb on + strand at 841.108 kb on + strand at 841.108 kb on + strand at 841.486 kb on + strand, within QEN71_RS03805 at 841.486 kb on + strand, within QEN71_RS03805 at 841.486 kb on + strand, within QEN71_RS03805 at 841.487 kb on - strand, within QEN71_RS03805 at 841.487 kb on - strand, within QEN71_RS03805 at 841.517 kb on + strand, within QEN71_RS03805 at 841.517 kb on + strand, within QEN71_RS03805 at 841.518 kb on - strand, within QEN71_RS03805 at 841.518 kb on - strand, within QEN71_RS03805 at 841.518 kb on - strand, within QEN71_RS03805 at 841.549 kb on + strand, within QEN71_RS03805 at 841.549 kb on + strand, within QEN71_RS03805 at 841.549 kb on + strand, within QEN71_RS03805 at 841.550 kb on - strand, within QEN71_RS03805 at 841.550 kb on - strand, within QEN71_RS03805 at 841.711 kb on + strand, within QEN71_RS03805 at 841.711 kb on + strand, within QEN71_RS03805 at 841.711 kb on + strand, within QEN71_RS03805 at 841.711 kb on + strand, within QEN71_RS03805 at 841.711 kb on + strand, within QEN71_RS03805 at 841.711 kb on + strand, within QEN71_RS03805 at 841.711 kb on + strand, within QEN71_RS03805 at 841.711 kb on + strand, within QEN71_RS03805 at 841.711 kb on + strand, within QEN71_RS03805 at 841.711 kb on + strand, within QEN71_RS03805 at 841.711 kb on + strand, within QEN71_RS03805 at 841.712 kb on - strand, within QEN71_RS03805 at 841.712 kb on - strand, within QEN71_RS03805 at 841.712 kb on - strand, within QEN71_RS03805 at 841.712 kb on - strand, within QEN71_RS03805 at 841.712 kb on - strand, within QEN71_RS03805 at 841.842 kb on + strand at 841.842 kb on + strand at 841.842 kb on + strand at 841.842 kb on + strand at 841.842 kb on + strand at 841.842 kb on + strand at 841.842 kb on + strand at 841.842 kb on + strand at 841.842 kb on + strand at 841.842 kb on + strand at 841.842 kb on + strand at 841.842 kb on + strand at 841.843 kb on - strand at 841.843 kb on - strand at 841.843 kb on - strand at 841.843 kb on - strand at 841.843 kb on - strand at 841.843 kb on - strand at 841.843 kb on - strand at 841.843 kb on - strand at 841.843 kb on - strand at 841.864 kb on + strand at 841.864 kb on + strand at 841.864 kb on + strand at 841.865 kb on - strand at 841.865 kb on - strand at 842.030 kb on + strand, within QEN71_RS03810 at 842.030 kb on + strand, within QEN71_RS03810 at 842.031 kb on - strand, within QEN71_RS03810 at 842.031 kb on - strand, within QEN71_RS03810 at 842.031 kb on - strand, within QEN71_RS03810 at 842.031 kb on - strand, within QEN71_RS03810 at 842.031 kb on - strand, within QEN71_RS03810 at 842.031 kb on - strand, within QEN71_RS03810 at 842.089 kb on + strand, within QEN71_RS03810 at 842.089 kb on + strand, within QEN71_RS03810 at 842.089 kb on + strand, within QEN71_RS03810 at 842.089 kb on + strand, within QEN71_RS03810 at 842.090 kb on - strand, within QEN71_RS03810 at 842.143 kb on + strand at 842.551 kb on + strand, within QEN71_RS03820 at 842.551 kb on + strand, within QEN71_RS03820 at 842.551 kb on + strand, within QEN71_RS03820 at 842.552 kb on - strand, within QEN71_RS03820 at 842.569 kb on - strand, within QEN71_RS03820 at 842.687 kb on - strand, within QEN71_RS03820 at 842.734 kb on + strand, within QEN71_RS03820 at 842.734 kb on + strand, within QEN71_RS03820 at 842.735 kb on - strand, within QEN71_RS03820 at 842.735 kb on - strand, within QEN71_RS03820 at 842.735 kb on - strand, within QEN71_RS03820 at 842.784 kb on + strand, within QEN71_RS03820 at 842.784 kb on + strand, within QEN71_RS03820 at 842.784 kb on + strand, within QEN71_RS03820 at 842.784 kb on + strand, within QEN71_RS03820 at 842.784 kb on + strand, within QEN71_RS03820 at 842.784 kb on + strand, within QEN71_RS03820 at 842.785 kb on - strand, within QEN71_RS03820 at 842.785 kb on - strand, within QEN71_RS03820 at 842.785 kb on - strand, within QEN71_RS03820 at 842.785 kb on - strand, within QEN71_RS03820 at 842.785 kb on - strand, within QEN71_RS03820
Per-strain Table
Position Strand Gene LocusTag Fraction Motility_outer_sample_with_outgrowth remove 840,102 - -1.2 840,102 - -2.2 840,111 + -1.0 840,111 + -0.9 840,111 + -0.7 840,111 + -0.9 840,111 + -0.8 840,111 + -1.5 840,111 + -0.2 840,111 + +0.6 840,111 + +1.9 840,111 + -0.2 840,112 - +0.1 840,112 - -1.5 840,112 - +1.4 840,112 - -0.7 840,112 - +0.1 840,112 - -0.5 840,112 - +0.7 840,112 - -0.5 840,148 + -0.9 840,148 + +0.9 840,148 + -0.1 840,148 + +0.9 840,148 + -0.9 840,148 + -0.6 840,149 - +0.8 840,149 - -0.5 840,149 - -1.1 840,149 - -0.0 840,149 - -0.0 840,149 - -0.2 840,169 + +0.2 840,169 + -0.3 840,169 + -1.7 840,170 - -0.8 840,170 - -1.1 840,211 + +0.5 840,211 + +0.4 840,211 + +0.0 840,211 + -1.0 840,211 + -0.4 840,211 + +0.0 840,211 + -0.5 840,212 - -0.3 840,212 - +1.3 840,212 - -0.6 840,212 - +0.5 840,212 - +1.1 840,212 - +0.2 840,212 - +0.0 840,212 - -0.7 840,212 - -0.6 840,231 + +0.4 840,247 + -0.9 840,248 - +0.2 840,248 - -0.5 840,248 - -0.6 840,296 - +0.1 840,365 + +0.3 840,366 - -0.6 840,366 - -1.5 840,366 - +0.7 840,763 - QEN71_RS03800 0.54 -0.7 840,763 - QEN71_RS03800 0.54 -0.4 840,798 + QEN71_RS03800 0.58 -0.7 840,799 - QEN71_RS03800 0.58 +0.3 840,799 - QEN71_RS03800 0.58 -0.2 840,826 - QEN71_RS03800 0.62 -1.5 840,939 + QEN71_RS03800 0.77 +0.4 840,941 + QEN71_RS03800 0.78 +0.8 840,941 + QEN71_RS03800 0.78 -0.8 840,941 + QEN71_RS03800 0.78 +1.3 840,941 + QEN71_RS03800 0.78 -0.2 840,941 + QEN71_RS03800 0.78 +0.1 840,941 + QEN71_RS03800 0.78 -0.3 840,942 - QEN71_RS03800 0.78 +0.8 840,942 - QEN71_RS03800 0.78 -0.1 840,953 + QEN71_RS03800 0.79 +0.4 840,953 + QEN71_RS03800 0.79 -0.6 840,953 + QEN71_RS03800 0.79 -2.1 840,953 + QEN71_RS03800 0.79 +0.1 840,954 - QEN71_RS03800 0.79 -0.2 840,954 - QEN71_RS03800 0.79 +2.5 841,040 + -0.3 841,040 + +0.2 841,040 + -1.1 841,040 + -0.1 841,040 + +0.1 841,041 - -0.1 841,041 - -1.0 841,041 - +0.7 841,041 - +1.1 841,041 - -0.1 841,041 - +0.3 841,066 - +0.3 841,108 + -1.4 841,108 + -1.1 841,108 + +0.3 841,108 + +0.1 841,486 + QEN71_RS03805 0.50 +1.7 841,486 + QEN71_RS03805 0.50 -0.8 841,486 + QEN71_RS03805 0.50 -0.5 841,487 - QEN71_RS03805 0.50 -1.0 841,487 - QEN71_RS03805 0.50 +1.1 841,517 + QEN71_RS03805 0.54 +0.6 841,517 + QEN71_RS03805 0.54 -0.1 841,518 - QEN71_RS03805 0.54 -0.9 841,518 - QEN71_RS03805 0.54 -0.0 841,518 - QEN71_RS03805 0.54 -0.7 841,549 + QEN71_RS03805 0.58 +0.2 841,549 + QEN71_RS03805 0.58 -1.8 841,549 + QEN71_RS03805 0.58 -0.2 841,550 - QEN71_RS03805 0.58 -1.3 841,550 - QEN71_RS03805 0.58 -0.6 841,711 + QEN71_RS03805 0.78 +0.1 841,711 + QEN71_RS03805 0.78 +0.5 841,711 + QEN71_RS03805 0.78 -0.7 841,711 + QEN71_RS03805 0.78 -0.6 841,711 + QEN71_RS03805 0.78 -0.3 841,711 + QEN71_RS03805 0.78 -0.4 841,711 + QEN71_RS03805 0.78 +0.5 841,711 + QEN71_RS03805 0.78 -0.8 841,711 + QEN71_RS03805 0.78 -1.5 841,711 + QEN71_RS03805 0.78 -1.2 841,711 + QEN71_RS03805 0.78 +0.5 841,712 - QEN71_RS03805 0.78 +0.0 841,712 - QEN71_RS03805 0.78 +0.2 841,712 - QEN71_RS03805 0.78 -0.2 841,712 - QEN71_RS03805 0.78 +1.2 841,712 - QEN71_RS03805 0.78 -0.5 841,842 + -0.3 841,842 + +2.3 841,842 + -0.2 841,842 + +0.1 841,842 + +1.3 841,842 + -0.6 841,842 + +2.6 841,842 + -0.6 841,842 + +2.3 841,842 + -0.3 841,842 + +0.2 841,842 + +0.1 841,843 - +0.4 841,843 - -0.5 841,843 - +0.5 841,843 - -1.3 841,843 - +0.6 841,843 - -0.3 841,843 - -1.5 841,843 - +1.3 841,843 - +1.0 841,864 + -0.4 841,864 + -1.3 841,864 + +0.5 841,865 - +0.4 841,865 - +0.1 842,030 + QEN71_RS03810 0.55 -0.7 842,030 + QEN71_RS03810 0.55 -0.3 842,031 - QEN71_RS03810 0.55 +0.2 842,031 - QEN71_RS03810 0.55 -1.3 842,031 - QEN71_RS03810 0.55 -1.3 842,031 - QEN71_RS03810 0.55 -0.4 842,031 - QEN71_RS03810 0.55 +1.6 842,031 - QEN71_RS03810 0.55 +0.0 842,089 + QEN71_RS03810 0.75 -1.7 842,089 + QEN71_RS03810 0.75 +0.3 842,089 + QEN71_RS03810 0.75 -0.6 842,089 + QEN71_RS03810 0.75 -1.2 842,090 - QEN71_RS03810 0.75 -1.2 842,143 + -1.0 842,551 + QEN71_RS03820 0.19 -1.6 842,551 + QEN71_RS03820 0.19 -1.0 842,551 + QEN71_RS03820 0.19 -0.5 842,552 - QEN71_RS03820 0.19 +0.4 842,569 - QEN71_RS03820 0.22 -0.3 842,687 - QEN71_RS03820 0.38 +0.2 842,734 + QEN71_RS03820 0.45 -1.1 842,734 + QEN71_RS03820 0.45 -0.7 842,735 - QEN71_RS03820 0.45 +0.1 842,735 - QEN71_RS03820 0.45 +0.4 842,735 - QEN71_RS03820 0.45 -0.0 842,784 + QEN71_RS03820 0.52 -0.9 842,784 + QEN71_RS03820 0.52 -1.4 842,784 + QEN71_RS03820 0.52 -0.8 842,784 + QEN71_RS03820 0.52 -1.0 842,784 + QEN71_RS03820 0.52 +1.7 842,784 + QEN71_RS03820 0.52 +0.5 842,785 - QEN71_RS03820 0.53 -0.3 842,785 - QEN71_RS03820 0.53 +0.6 842,785 - QEN71_RS03820 0.53 -0.9 842,785 - QEN71_RS03820 0.53 -1.8 842,785 - QEN71_RS03820 0.53 -0.9
Or see this region's nucleotide sequence