Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03975

Experiment: Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment B, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MIT9313; Experiment B, time point 1
4,460,799	-		MIT1002_03973	0.52	+0.2
4,460,834	-		MIT1002_03973	0.56	+1.0
4,460,851	+		MIT1002_03973	0.58	-0.3
4,460,862	+		MIT1002_03973	0.59	-0.1
4,460,866	+		MIT1002_03973	0.60	-1.1
4,460,874	-		MIT1002_03973	0.60	-0.8
4,460,874	-		MIT1002_03973	0.60	+0.1
4,460,874	-		MIT1002_03973	0.60	+0.4
4,460,885	+		MIT1002_03973	0.62	+0.6
4,460,885	+		MIT1002_03973	0.62	-0.9
4,460,885	+		MIT1002_03973	0.62	+0.4
4,460,893	-		MIT1002_03973	0.63	-0.4
4,460,995	-		MIT1002_03973	0.74	+0.3
4,461,010	+		MIT1002_03973	0.76	-1.5
4,461,102	+		MIT1002_03973	0.86	-2.8
4,461,121	+		MIT1002_03973	0.88	-0.1
4,461,121	+		MIT1002_03973	0.88	+0.7
4,461,121	+		MIT1002_03973	0.88	-0.9
4,461,129	-		MIT1002_03973	0.89	+1.1
4,461,129	-		MIT1002_03973	0.89	-0.3
4,461,129	-		MIT1002_03973	0.89	+0.2
4,461,129	-		MIT1002_03973	0.89	-0.3
4,461,129	-		MIT1002_03973	0.89	+1.4
4,461,136	-		MIT1002_03973	0.90	+0.4
4,461,150	-				+1.6
4,461,248	+				+0.5
4,461,248	+				-0.8
4,461,256	-				-0.4
4,461,256	-				+0.6
4,461,307	-		MIT1002_03974	0.13	-1.3
4,461,366	+		MIT1002_03974	0.28	+0.4
4,461,373	+		MIT1002_03974	0.30	-0.5
4,461,396	+		MIT1002_03974	0.35	-1.2
4,461,403	+		MIT1002_03974	0.37	+0.3
4,461,436	+		MIT1002_03974	0.45	+0.7
4,461,444	-		MIT1002_03974	0.47	+1.0
4,461,495	+		MIT1002_03974	0.60	+1.9
4,461,503	-		MIT1002_03974	0.62	+0.1
4,461,503	-		MIT1002_03974	0.62	-0.2
4,461,506	-		MIT1002_03974	0.62	-0.7
4,461,513	+		MIT1002_03974	0.64	+0.2
4,461,532	+		MIT1002_03974	0.69	-0.2
4,461,532	+		MIT1002_03974	0.69	-0.7
4,461,540	-		MIT1002_03974	0.71	-2.2
4,461,640	-				-0.1
4,461,640	-				-0.1
4,461,694	+				+0.5
4,461,699	+				+1.2
4,461,709	+				-2.0
4,461,775	+				-3.9
4,461,876	-				-2.0
4,462,113	+		MIT1002_03975	0.36	-1.4
4,462,120	+		MIT1002_03975	0.36	-1.6
4,462,130	+		MIT1002_03975	0.37	-0.4
4,462,130	+		MIT1002_03975	0.37	-2.0
4,462,191	-		MIT1002_03975	0.44	-1.6
4,462,354	-		MIT1002_03975	0.62	-2.4
4,462,354	-		MIT1002_03975	0.62	-1.0
4,462,354	-		MIT1002_03975	0.62	-1.2
4,462,373	+		MIT1002_03975	0.64	-3.1
4,462,376	+		MIT1002_03975	0.64	+1.1
4,462,574	+		MIT1002_03975	0.86	-1.8
4,462,574	+		MIT1002_03975	0.86	-0.6
4,462,574	+		MIT1002_03975	0.86	+0.6
4,462,574	+		MIT1002_03975	0.86	-1.3
4,462,853	-				-2.1
4,463,061	+		MIT1002_03976	0.13	-0.4
4,463,069	-		MIT1002_03976	0.13	-3.6
4,463,148	-		MIT1002_03976	0.17	-3.2
4,463,215	-		MIT1002_03976	0.20	-0.4
4,463,447	+		MIT1002_03976	0.32	-1.6
4,463,467	-		MIT1002_03976	0.33	-0.4
4,463,515	-		MIT1002_03976	0.35	-1.6
4,463,568	-		MIT1002_03976	0.37	-1.8
4,463,660	-		MIT1002_03976	0.42	-1.0
4,463,683	-		MIT1002_03976	0.43	-1.0